| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is minD [H]
Identifier: 148260984
GI number: 148260984
Start: 2183172
End: 2183987
Strand: Reverse
Name: minD [H]
Synonym: Acry_1991
Alternate gene names: 148260984
Gene position: 2183987-2183172 (Counterclockwise)
Preceding gene: 148260985
Following gene: 148260983
Centisome position: 64.44
GC content: 65.07
Gene sequence:
>816_bases ATGGCGAAGGTTCTCGTAGTCACATCGGGCAAGGGCGGCGTCGGCAAGACGACCTCTTCGGCCTCGCTGGGCGCAGCTCT CGCCCAGGCTGGGCAGAATGTCGTGGTGGTCGATTTCGATGTCGGCTTGCGCAATCTGGATCTGGTCATGGGTGCCGAGC GTCGTGTCGTGTTCGACCTGGTCAACGTCGTGCAGGGCGATGCGAAACTCGCGCAGGCGCTGATCCGCGACAAGCGGGTC GACACGCTGTCGCTCCTGCCCGCGTCGCAGACCCGCGACAAGGATGCGCTGACGCCTGAAGGCGTCGAACGGGTGATTGG CGAGCTGCGCGAGAAGTTCGACTGGATCATCTGCGACAGCCCCGCCGGCATCGAGCGTGGCGCCACGCTCGCGATGCGCC ACGCCGACGTCGCCGTGGTGGTGACCAACCCCGAGGTGTCCTCGGTGCGCGACTCCGACCGGATCATCGGCCTGCTGGAT TCGAAAACCGTGCGGGCCGAGGCGGGCGAAACGATCGAGAAGCACCTCCTGCTCACCCGCTACGACGCCGGCCGCGCCGC CCGTGGCGAGATGCTGAAGGTCGAGGATATCCTGGAAATCCTCGCGATCCCTCTGATCGGCATCATCCCTGACAGCGAGG ACGTGCTGCGCGCCTCGAATGTCGGCTGTCCCGTCACGTTGCACAGTCCAACATCCGCGCCCGCCCGCGCCTATATCGAT TCGGCCCGGCGGCTGATGGGCGAGACGATCGAAATTACCGCACCGGTCGAAAAGAAGACCTTGATGAGCCGTCTGTTCGG CAGGAAGGTCGCATGA
Upstream 100 bases:
>100_bases ACGGCGGATCACTGGGGCACCGGCCTGCAGGGGCGGGCGGTGCAGGTCTGGCTGGATGACAAGGAGCTGCGCCTCGCAGC ATTGGGATAGGAATTCATTC
Downstream 100 bases:
>100_bases ACCTGTTCAATTTTTTCACCCGCTCGCGCAGCACCGCTCCGGTTGCGCGCGAGCGGCTGCAACTCCTGCTCGCCCATGAA CGCGCGCTCTCCGGCCAATC
Product: septum site-determining protein MinD
Products: NA
Alternate protein names: Cell division inhibitor minD [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAKVLVVTSGKGGVGKTTSSASLGAALAQAGQNVVVVDFDVGLRNLDLVMGAERRVVFDLVNVVQGDAKLAQALIRDKRV DTLSLLPASQTRDKDALTPEGVERVIGELREKFDWIICDSPAGIERGATLAMRHADVAVVVTNPEVSSVRDSDRIIGLLD SKTVRAEAGETIEKHLLLTRYDAGRAARGEMLKVEDILEILAIPLIGIIPDSEDVLRASNVGCPVTLHSPTSAPARAYID SARRLMGETIEITAPVEKKTLMSRLFGRKVA
Sequences:
>Translated_271_residues MAKVLVVTSGKGGVGKTTSSASLGAALAQAGQNVVVVDFDVGLRNLDLVMGAERRVVFDLVNVVQGDAKLAQALIRDKRV DTLSLLPASQTRDKDALTPEGVERVIGELREKFDWIICDSPAGIERGATLAMRHADVAVVVTNPEVSSVRDSDRIIGLLD SKTVRAEAGETIEKHLLLTRYDAGRAARGEMLKVEDILEILAIPLIGIIPDSEDVLRASNVGCPVTLHSPTSAPARAYID SARRLMGETIEITAPVEKKTLMSRLFGRKVA >Mature_270_residues AKVLVVTSGKGGVGKTTSSASLGAALAQAGQNVVVVDFDVGLRNLDLVMGAERRVVFDLVNVVQGDAKLAQALIRDKRVD TLSLLPASQTRDKDALTPEGVERVIGELREKFDWIICDSPAGIERGATLAMRHADVAVVVTNPEVSSVRDSDRIIGLLDS KTVRAEAGETIEKHLLLTRYDAGRAARGEMLKVEDILEILAIPLIGIIPDSEDVLRASNVGCPVTLHSPTSAPARAYIDS ARRLMGETIEITAPVEKKTLMSRLFGRKVA
Specific function: ATPase required for the correct placement of the division site. Cell division inhibitors minC and minD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to desta
COG id: COG2894
COG function: function code D; Septum formation inhibitor-activating ATPase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family. MinD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787423, Length=270, Percent_Identity=61.1111111111111, Blast_Score=323, Evalue=1e-89,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010223 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29013; Mature: 28882
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVLVVTSGKGGVGKTTSSASLGAALAQAGQNVVVVDFDVGLRNLDLVMGAERRVVFDL CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEHEEECCCHHHHHHH VNVVQGDAKLAQALIRDKRVDTLSLLPASQTRDKDALTPEGVERVIGELREKFDWIICDS HHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECC PAGIERGATLAMRHADVAVVVTNPEVSSVRDSDRIIGLLDSKTVRAEAGETIEKHLLLTR CCCCCCCCEEEEEECCEEEEEECCCHHHCCCCCCEEEEECCCEEHHHCCCHHHHHEEEEE YDAGRAARGEMLKVEDILEILAIPLIGIIPDSEDVLRASNVGCPVTLHSPTSAPARAYID ECCCCCCCCCEEEHHHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEECCCCCCHHHHHHH SARRLMGETIEITAPVEKKTLMSRLFGRKVA HHHHHCCCEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure AKVLVVTSGKGGVGKTTSSASLGAALAQAGQNVVVVDFDVGLRNLDLVMGAERRVVFDL CEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEHEEECCCHHHHHHH VNVVQGDAKLAQALIRDKRVDTLSLLPASQTRDKDALTPEGVERVIGELREKFDWIICDS HHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECC PAGIERGATLAMRHADVAVVVTNPEVSSVRDSDRIIGLLDSKTVRAEAGETIEKHLLLTR CCCCCCCCEEEEEECCEEEEEECCCHHHCCCCCCEEEEECCCEEHHHCCCHHHHHEEEEE YDAGRAARGEMLKVEDILEILAIPLIGIIPDSEDVLRASNVGCPVTLHSPTSAPARAYID ECCCCCCCCCEEEHHHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEECCCCCCHHHHHHH SARRLMGETIEITAPVEKKTLMSRLFGRKVA HHHHHCCCEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]