| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260980
Identifier: 148260980
GI number: 148260980
Start: 2179567
End: 2181066
Strand: Reverse
Name: 148260980
Synonym: Acry_1987
Alternate gene names: NA
Gene position: 2181066-2179567 (Counterclockwise)
Preceding gene: 148260981
Following gene: 148260978
Centisome position: 64.35
GC content: 64.07
Gene sequence:
>1500_bases ATGAGCAGGATGACGAAGCCGGGCGGAAAGGCTCCGGAACCGGCACAGTCCGCGGCAGTGCGCAATCGCGATCCCGAAGC CAGGACGTTTGGTATCCTGGATCTCCAGTTCACATCCGTTGATCCGATCACGATCAGCGGCACTATCGGCGGAACCGCCG ATGTCGAATATGCCGATGAACTCCTGCTGTCGGTCCTGACGCCCATTGCCATGCCGCGCATCGATTCCGATCCGTCCGAT GATCCGGACGAGTCCTTCGATATCGAGCAAAATGATCTTCACGAACACGCGGAAGACCAGGTCAGCACGGTTGCACCGTT GCAGCAGACGGACATGCACGGCACGACCGGCCTTGTCGATCTGACGCGTTTCGCCGCGGAGGCTGCCTCACCGCAAGCCG CGATGTCCCCCTTCGATCTGGCGCCCAGAGGCGTTGCGGACCAGACGGCCGCTTCCGCCGGGTCTGCGGATCTCGCGCCG CAGCCGGCCAGTGACAGGAATGCCGGCGTCACCACCTCGGTTTGTTTCCTCGAAGGAACCAGGATCTTCGGCCTGAATGG CGACATCCCGGTTGAGACCATGAACCGTGGCGATCGGCTGATCACCAAATCCGGAGCCATGCGGCCGGTGCGCTGGGTCG GACGCCGGACGATCGACAGCCAGCGCCATCCCCGGCCCGAAACAGTCTGGCCCGTGCGGATCGAGCGCGGCGCAATCGAC GATGGTCTGCCCGAGCGGACACTCTATCTCTCACCCGATCATGCGATCTATCTCGATGGTTGCCTCGTGCCTGCCAAGGC GCTGGTGAACGGCCGCTCGATCGTCCAGGAGCAACGCCGCAGCTTCACCTATTATCACATCGAACTCGAGACCCACGACA TCCTGCTCGCGGAAGGACTGCCCACCGAGTCCTATCTCGACACGGGCAATCGCCGCTTCTTCGAAAGCGACGATGATGCG ATGACCCTTCATCCCGATTTCGCACAGACGATGCGCGAAACCCGCAGTTGTGCGCCCTTTGTCGAATCGGGGCCGATGCT GGCCGCGATCCGGGCGCGCATCGATGCGCGGCTGCCAGCTGCCGAGATAACGACCGATCCCGGCCTGCGCGTGCTCGCGA ACGGGCGTTTCCTGCCCGTCTCGTCACTCGATCCGACGACCTATGCCGTGCAGCTGCCTGCGTCGCCGACCGATCTGCGG CTGATGTCGAATGTCGTCGTCCCCGCCGAACTCCATCCGGACGCCGAGGATCGCCGTCGCCTCGGTCTCGACGTCGTCCA ACTGCTGATAATGAACGAGGGGCGGATGGTTCATGTGCCGCTCGAGAGCGAAATGCTGGGGGAAGGCTGGTACGCGCTGG AGTCCGGGCATCGCTGGACCAATGGCGATGCCGTCATCCCGGCTTCACTGACGGCCGGCGCCAAGACGCTGCTGGTGCGC CTCGCCGGGCAGACGAGCTACCCGGTTGCCGGCGCCATTGCCGCCGGGGTCGGATCCTGA
Upstream 100 bases:
>100_bases ATAAAAAAAAAGATAAAACTGAAAATTTTTCAAATTTTGAACTTACCCGGATTTTTATGCCTGTTATGGGCCAGGCACGA CGTTCCGGTGGGAGAAGAAG
Downstream 100 bases:
>100_bases TCAGCCGACCAGGCGGGTGAATCCGTTGGTGATCGGATAGCGACGGTCGCGGCCGAAGGCGCGCGCGGTAATCTTCACGC CGGGTGGCGCCTGGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Secretion Target Repeat Protein; Hemagglutinin-Related Protein; Type I Secretion Target Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Adhesin Family Protein; Peptidase Metallopeptidase; Collagen Triple Helix Repeat-Containing Protein; Collagen Triple Helix Repeat; Peroxidase; Bifunctional Hemolysin/Adenylate Cyclase
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSRMTKPGGKAPEPAQSAAVRNRDPEARTFGILDLQFTSVDPITISGTIGGTADVEYADELLLSVLTPIAMPRIDSDPSD DPDESFDIEQNDLHEHAEDQVSTVAPLQQTDMHGTTGLVDLTRFAAEAASPQAAMSPFDLAPRGVADQTAASAGSADLAP QPASDRNAGVTTSVCFLEGTRIFGLNGDIPVETMNRGDRLITKSGAMRPVRWVGRRTIDSQRHPRPETVWPVRIERGAID DGLPERTLYLSPDHAIYLDGCLVPAKALVNGRSIVQEQRRSFTYYHIELETHDILLAEGLPTESYLDTGNRRFFESDDDA MTLHPDFAQTMRETRSCAPFVESGPMLAAIRARIDARLPAAEITTDPGLRVLANGRFLPVSSLDPTTYAVQLPASPTDLR LMSNVVVPAELHPDAEDRRRLGLDVVQLLIMNEGRMVHVPLESEMLGEGWYALESGHRWTNGDAVIPASLTAGAKTLLVR LAGQTSYPVAGAIAAGVGS
Sequences:
>Translated_499_residues MSRMTKPGGKAPEPAQSAAVRNRDPEARTFGILDLQFTSVDPITISGTIGGTADVEYADELLLSVLTPIAMPRIDSDPSD DPDESFDIEQNDLHEHAEDQVSTVAPLQQTDMHGTTGLVDLTRFAAEAASPQAAMSPFDLAPRGVADQTAASAGSADLAP QPASDRNAGVTTSVCFLEGTRIFGLNGDIPVETMNRGDRLITKSGAMRPVRWVGRRTIDSQRHPRPETVWPVRIERGAID DGLPERTLYLSPDHAIYLDGCLVPAKALVNGRSIVQEQRRSFTYYHIELETHDILLAEGLPTESYLDTGNRRFFESDDDA MTLHPDFAQTMRETRSCAPFVESGPMLAAIRARIDARLPAAEITTDPGLRVLANGRFLPVSSLDPTTYAVQLPASPTDLR LMSNVVVPAELHPDAEDRRRLGLDVVQLLIMNEGRMVHVPLESEMLGEGWYALESGHRWTNGDAVIPASLTAGAKTLLVR LAGQTSYPVAGAIAAGVGS >Mature_498_residues SRMTKPGGKAPEPAQSAAVRNRDPEARTFGILDLQFTSVDPITISGTIGGTADVEYADELLLSVLTPIAMPRIDSDPSDD PDESFDIEQNDLHEHAEDQVSTVAPLQQTDMHGTTGLVDLTRFAAEAASPQAAMSPFDLAPRGVADQTAASAGSADLAPQ PASDRNAGVTTSVCFLEGTRIFGLNGDIPVETMNRGDRLITKSGAMRPVRWVGRRTIDSQRHPRPETVWPVRIERGAIDD GLPERTLYLSPDHAIYLDGCLVPAKALVNGRSIVQEQRRSFTYYHIELETHDILLAEGLPTESYLDTGNRRFFESDDDAM TLHPDFAQTMRETRSCAPFVESGPMLAAIRARIDARLPAAEITTDPGLRVLANGRFLPVSSLDPTTYAVQLPASPTDLRL MSNVVVPAELHPDAEDRRRLGLDVVQLLIMNEGRMVHVPLESEMLGEGWYALESGHRWTNGDAVIPASLTAGAKTLLVRL AGQTSYPVAGAIAAGVGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53945; Mature: 53814
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMTKPGGKAPEPAQSAAVRNRDPEARTFGILDLQFTSVDPITISGTIGGTADVEYADE CCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHH LLLSVLTPIAMPRIDSDPSDDPDESFDIEQNDLHEHAEDQVSTVAPLQQTDMHGTTGLVD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHH LTRFAAEAASPQAAMSPFDLAPRGVADQTAASAGSADLAPQPASDRNAGVTTSVCFLEGT HHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECC RIFGLNGDIPVETMNRGDRLITKSGAMRPVRWVGRRTIDSQRHPRPETVWPVRIERGAID EEEECCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC DGLPERTLYLSPDHAIYLDGCLVPAKALVNGRSIVQEQRRSFTYYHIELETHDILLAEGL CCCCCCEEEECCCCEEEECCCHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCEEEEECCC PTESYLDTGNRRFFESDDDAMTLHPDFAQTMRETRSCAPFVESGPMLAAIRARIDARLPA CCHHHHCCCCCEEECCCCCEEEECCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCH AEITTDPGLRVLANGRFLPVSSLDPTTYAVQLPASPTDLRLMSNVVVPAELHPDAEDRRR HHCCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCHHHHHHCEEEEECCCCCHHHHHH LGLDVVQLLIMNEGRMVHVPLESEMLGEGWYALESGHRWTNGDAVIPASLTAGAKTLLVR HHHHHHHHHHHCCCCEEEEECCHHHHCCCCEEECCCCEECCCCEEEECHHHCCHHEEEEE LAGQTSYPVAGAIAAGVGS ECCCCCCCHHHHHHCCCCC >Mature Secondary Structure SRMTKPGGKAPEPAQSAAVRNRDPEARTFGILDLQFTSVDPITISGTIGGTADVEYADE CCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHH LLLSVLTPIAMPRIDSDPSDDPDESFDIEQNDLHEHAEDQVSTVAPLQQTDMHGTTGLVD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHH LTRFAAEAASPQAAMSPFDLAPRGVADQTAASAGSADLAPQPASDRNAGVTTSVCFLEGT HHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECC RIFGLNGDIPVETMNRGDRLITKSGAMRPVRWVGRRTIDSQRHPRPETVWPVRIERGAID EEEECCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC DGLPERTLYLSPDHAIYLDGCLVPAKALVNGRSIVQEQRRSFTYYHIELETHDILLAEGL CCCCCCEEEECCCCEEEECCCHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCEEEEECCC PTESYLDTGNRRFFESDDDAMTLHPDFAQTMRETRSCAPFVESGPMLAAIRARIDARLPA CCHHHHCCCCCEEECCCCCEEEECCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCH AEITTDPGLRVLANGRFLPVSSLDPTTYAVQLPASPTDLRLMSNVVVPAELHPDAEDRRR HHCCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCHHHHHHCEEEEECCCCCHHHHHH LGLDVVQLLIMNEGRMVHVPLESEMLGEGWYALESGHRWTNGDAVIPASLTAGAKTLLVR HHHHHHHHHHHCCCCEEEEECCHHHHCCCCEEECCCCEECCCCEEEECHHHCCHHEEEEE LAGQTSYPVAGAIAAGVGS ECCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA