Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

Click here to switch to the map view.

The map label for this gene is 148260960

Identifier: 148260960

GI number: 148260960

Start: 2157342

End: 2157767

Strand: Reverse

Name: 148260960

Synonym: Acry_1967

Alternate gene names: NA

Gene position: 2157767-2157342 (Counterclockwise)

Preceding gene: 148260961

Following gene: 148260959

Centisome position: 63.67

GC content: 73.0

Gene sequence:

>426_bases
TTGATCCACCTGGTCAAGCTCGCGGTCGGCGTGAAGGATCCCGGCCACCTGGCCGAGATCCAGCGCCGCCGCGCCGTGGC
CGATCCGCCGCTGCGCCACCAGACCCGCAGCTTTCCCAAGCGCGCGGCGGAGCTGACCGATGGCGGGTCGATCTACTGGG
TCATCACCGGCGCCGTGCTGGTTCGCCAGCGTGTGCTCGACGTCACCGAGGATGTCTGGGATGACGGCACGCGCTGCACC
GGCCTCGTGCTCGACCCCACGCTCGTCCGGGTCGAGGCGCGGCCGATGAAGCCCTTCCAGGGCTGGCGCTACCTCGCGCC
GGACGACGCGCCGGCCGACCTGCCGGAAGGCGGCCGCACTTCCGGCATCGAGGACCTGCCGCCGGCGCTGCGGCGCGACC
TGCGCGCCCTGGCGCTGCTGCCATGA

Upstream 100 bases:

>100_bases
ACGCGGTGATCGACGCGCTTGCCGTCGACGGTATCCGCGAGATCGACATGCCGGCGACGCCCGAGCGCGTCTGGCAGGCG
ATCTCGGCGCGGCAGGCCGC

Downstream 100 bases:

>100_bases
CGCTCCGCCTGCCGTGGTCGCGCCCGTGCGTGCCGGTGATCCGGCTTGCCGGGCTGATCTCGCCGCGCGAGGGGGCGGTC
AATCTCGAACGCTTTGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIHLVKLAVGVKDPGHLAEIQRRRAVADPPLRHQTRSFPKRAAELTDGGSIYWVITGAVLVRQRVLDVTEDVWDDGTRCT
GLVLDPTLVRVEARPMKPFQGWRYLAPDDAPADLPEGGRTSGIEDLPPALRRDLRALALLP

Sequences:

>Translated_141_residues
MIHLVKLAVGVKDPGHLAEIQRRRAVADPPLRHQTRSFPKRAAELTDGGSIYWVITGAVLVRQRVLDVTEDVWDDGTRCT
GLVLDPTLVRVEARPMKPFQGWRYLAPDDAPADLPEGGRTSGIEDLPPALRRDLRALALLP
>Mature_141_residues
MIHLVKLAVGVKDPGHLAEIQRRRAVADPPLRHQTRSFPKRAAELTDGGSIYWVITGAVLVRQRVLDVTEDVWDDGTRCT
GLVLDPTLVRVEARPMKPFQGWRYLAPDDAPADLPEGGRTSGIEDLPPALRRDLRALALLP

Specific function: Unknown

COG id: COG5458

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15616; Mature: 15616

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLVKLAVGVKDPGHLAEIQRRRAVADPPLRHQTRSFPKRAAELTDGGSIYWVITGAVL
CEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
VRQRVLDVTEDVWDDGTRCTGLVLDPTLVRVEARPMKPFQGWRYLAPDDAPADLPEGGRT
HHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCC
SGIEDLPPALRRDLRALALLP
CCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIHLVKLAVGVKDPGHLAEIQRRRAVADPPLRHQTRSFPKRAAELTDGGSIYWVITGAVL
CEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
VRQRVLDVTEDVWDDGTRCTGLVLDPTLVRVEARPMKPFQGWRYLAPDDAPADLPEGGRT
HHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCC
SGIEDLPPALRRDLRALALLP
CCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA