| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is gltX
Identifier: 148260952
GI number: 148260952
Start: 2148736
End: 2150136
Strand: Reverse
Name: gltX
Synonym: Acry_1959
Alternate gene names: 148260952
Gene position: 2150136-2148736 (Counterclockwise)
Preceding gene: 148260953
Following gene: 148260950
Centisome position: 63.44
GC content: 68.67
Gene sequence:
>1401_bases ATGACAATCCGCGTCCGTTTCGCGCCGTCGCCCACCGGCATGCTCCATATCGGCGGCGCCCGCACCGCCCTGTTCAACTA TCTCTTCGCCCGCCATCACGGCGGCCAGTTCCTGCTCCGCGTCGAGGATACCGATCGCGAGCGCAGCACGCCCGAGGCAA CGAAGGTCATCCTCGACGCGCTCGACTGGCTCGACCTGAAGCCCGACGAACCGCCGGTCTATCAATCGACCCGCTATGCC CGCCATCGCGAGGTGGCCGAGCAGATGCTCGCCGCCGGCCAGGCCTATCGCTGCTACTGCTCCCGCGAGGAGCTTGCCGA GATGCGCGCCGAGGCCGAGCGGAGCAAAAAGCCGTTCCGCTATGACGGGCGCTGGCGCGACCGCGATCCGGCCGAAGCGC CGGCCGGCGTCGATCCCGTCATCCGCCTGCGCGCCCCGCGCGAGGGCGAGACCGTGATCCACGATCTCGTCCAGGGCGAG GTGCGGGTGAAGAACGCCGAGCTGGACGACATGATCCTGCTGCGCTCCGACGGCACGCCGACCTATCTGCACGCCGTCGT GGTGGATGACCACGACATGGGCATCACCCATGTCATCCGCGGCGACGACCATCTGACCAACACGTTCCGCCAGGCCCAGA TCTACGACGCGATGGGCTGGGCGCGGCCGAATTTCGCCCATATCCCCCTGATCCACGGCGCGGACGGTGCGAAACTCTCG AAGCGTCACGGCGCCGTCTCGGTCCTGCAGTTCCGCGACGAGGGCTATCTGCCCGAGGCGCTCTGCAACTACCTGCTCCG CCTCGGCTGGGGCCATGGCGATGCGGAGATCCTGCCCCGCGAGGAGCAGGTCGCGCTGTTCGACCTCGATGGCGTCGGCC GCGCCGCGAGCCGGATGGACTATGCCAAGCTGCTCCACGTCAACGCCGTCTTCCTCCGCGCCGCCGAGGACGAACGCCTT GCCGCCGATGTCGTCGCCCGGCTCGAACGCGATCACGGTTTTCCGGTGAGCACCGAGGCGGCGGGCCGCATCGCGATGCT GATGCCGGGGCTGAAGGACCGCGCCCGCACCCTGGCCGAACTGGCGGAATCCGCCCTGTTCGTCGTTCGTGAGGCGCCGC TGCCGATGACCGAGAAGGCCGAAGCCCTGCTCACCGAGGCGGCGCGCGACGACCTCGCCGCCCTGCTGCTCGATTTCGAC AAGACCGATTTCTCGAAGGCGGCGCTGCACGAGGCGATGAAGGCCTATGCCGAGCGCGAGGAGAAAAAGCTCGGCGCCAT TGCCCAGCCGCTCCGCGCGGCGCTGACCGGCAGCACCGTCAGCCCGCCGATCGACGCGGTGATGGAAGCGCTCGGCCCGA TCGAGGTCCGCAAGCGGATCTTTTCCGTCCTCGGCGAATAG
Upstream 100 bases:
>100_bases GGCCGATTGCGCGGCCGCCGGGCTCGATCCGCGCGCCATCATCGGCGGGTTCCGCTGGTAAGGGTTCATCCCCGCGCCGT TTCGTGATAGCGCCGGGGTC
Downstream 100 bases:
>100_bases CGCCGCCGTTGCCGCCCGAAAAAATGGCGGGCGCCGCAAGGCCGCCCGCCATTCGCGTTTCAGCCGGGGAGGGAACGGAA CATCAGCGATTGACCGCCTT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MTIRVRFAPSPTGMLHIGGARTALFNYLFARHHGGQFLLRVEDTDRERSTPEATKVILDALDWLDLKPDEPPVYQSTRYA RHREVAEQMLAAGQAYRCYCSREELAEMRAEAERSKKPFRYDGRWRDRDPAEAPAGVDPVIRLRAPREGETVIHDLVQGE VRVKNAELDDMILLRSDGTPTYLHAVVVDDHDMGITHVIRGDDHLTNTFRQAQIYDAMGWARPNFAHIPLIHGADGAKLS KRHGAVSVLQFRDEGYLPEALCNYLLRLGWGHGDAEILPREEQVALFDLDGVGRAASRMDYAKLLHVNAVFLRAAEDERL AADVVARLERDHGFPVSTEAAGRIAMLMPGLKDRARTLAELAESALFVVREAPLPMTEKAEALLTEAARDDLAALLLDFD KTDFSKAALHEAMKAYAEREEKKLGAIAQPLRAALTGSTVSPPIDAVMEALGPIEVRKRIFSVLGE
Sequences:
>Translated_466_residues MTIRVRFAPSPTGMLHIGGARTALFNYLFARHHGGQFLLRVEDTDRERSTPEATKVILDALDWLDLKPDEPPVYQSTRYA RHREVAEQMLAAGQAYRCYCSREELAEMRAEAERSKKPFRYDGRWRDRDPAEAPAGVDPVIRLRAPREGETVIHDLVQGE VRVKNAELDDMILLRSDGTPTYLHAVVVDDHDMGITHVIRGDDHLTNTFRQAQIYDAMGWARPNFAHIPLIHGADGAKLS KRHGAVSVLQFRDEGYLPEALCNYLLRLGWGHGDAEILPREEQVALFDLDGVGRAASRMDYAKLLHVNAVFLRAAEDERL AADVVARLERDHGFPVSTEAAGRIAMLMPGLKDRARTLAELAESALFVVREAPLPMTEKAEALLTEAARDDLAALLLDFD KTDFSKAALHEAMKAYAEREEKKLGAIAQPLRAALTGSTVSPPIDAVMEALGPIEVRKRIFSVLGE >Mature_465_residues TIRVRFAPSPTGMLHIGGARTALFNYLFARHHGGQFLLRVEDTDRERSTPEATKVILDALDWLDLKPDEPPVYQSTRYAR HREVAEQMLAAGQAYRCYCSREELAEMRAEAERSKKPFRYDGRWRDRDPAEAPAGVDPVIRLRAPREGETVIHDLVQGEV RVKNAELDDMILLRSDGTPTYLHAVVVDDHDMGITHVIRGDDHLTNTFRQAQIYDAMGWARPNFAHIPLIHGADGAKLSK RHGAVSVLQFRDEGYLPEALCNYLLRLGWGHGDAEILPREEQVALFDLDGVGRAASRMDYAKLLHVNAVFLRAAEDERLA ADVVARLERDHGFPVSTEAAGRIAMLMPGLKDRARTLAELAESALFVVREAPLPMTEKAEALLTEAARDDLAALLLDFDK TDFSKAALHEAMKAYAEREEKKLGAIAQPLRAALTGSTVSPPIDAVMEALGPIEVRKRIFSVLGE
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=502, Percent_Identity=36.0557768924303, Blast_Score=261, Evalue=1e-69, Organism=Escherichia coli, GI1788743, Length=472, Percent_Identity=45.3389830508475, Blast_Score=405, Evalue=1e-114, Organism=Escherichia coli, GI226510925, Length=241, Percent_Identity=36.0995850622407, Blast_Score=129, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71993394, Length=479, Percent_Identity=33.4029227557411, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI17511007, Length=278, Percent_Identity=22.6618705035971, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324540, Length=487, Percent_Identity=32.0328542094456, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6324742, Length=111, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6321192, Length=231, Percent_Identity=29.004329004329, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665321, Length=477, Percent_Identity=34.5911949685535, Blast_Score=253, Evalue=3e-67,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE1_ACICJ (A5FZX8)
Other databases:
- EMBL: CP000697 - RefSeq: YP_001235079.1 - ProteinModelPortal: A5FZX8 - SMR: A5FZX8 - STRING: A5FZX8 - GeneID: 5160851 - GenomeReviews: CP000697_GR - KEGG: acr:Acry_1959 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - BioCyc: ACRY349163:ACRY_1959-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 51935; Mature: 51804
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 241-241
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRVRFAPSPTGMLHIGGARTALFNYLFARHHGGQFLLRVEDTDRERSTPEATKVILDA CEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHH LDWLDLKPDEPPVYQSTRYARHREVAEQMLAAGQAYRCYCSREELAEMRAEAERSKKPFR HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCC YDGRWRDRDPAEAPAGVDPVIRLRAPREGETVIHDLVQGEVRVKNAELDDMILLRSDGTP CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCC TYLHAVVVDDHDMGITHVIRGDDHLTNTFRQAQIYDAMGWARPNFAHIPLIHGADGAKLS EEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH KRHGAVSVLQFRDEGYLPEALCNYLLRLGWGHGDAEILPREEQVALFDLDGVGRAASRMD HHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH YAKLLHVNAVFLRAAEDERLAADVVARLERDHGFPVSTEAAGRIAMLMPGLKDRARTLAE HHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHH LAESALFVVREAPLPMTEKAEALLTEAARDDLAALLLDFDKTDFSKAALHEAMKAYAERE HHHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH EKKLGAIAQPLRAALTGSTVSPPIDAVMEALGPIEVRKRIFSVLGE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure TIRVRFAPSPTGMLHIGGARTALFNYLFARHHGGQFLLRVEDTDRERSTPEATKVILDA EEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHH LDWLDLKPDEPPVYQSTRYARHREVAEQMLAAGQAYRCYCSREELAEMRAEAERSKKPFR HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCC YDGRWRDRDPAEAPAGVDPVIRLRAPREGETVIHDLVQGEVRVKNAELDDMILLRSDGTP CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCC TYLHAVVVDDHDMGITHVIRGDDHLTNTFRQAQIYDAMGWARPNFAHIPLIHGADGAKLS EEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH KRHGAVSVLQFRDEGYLPEALCNYLLRLGWGHGDAEILPREEQVALFDLDGVGRAASRMD HHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH YAKLLHVNAVFLRAAEDERLAADVVARLERDHGFPVSTEAAGRIAMLMPGLKDRARTLAE HHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHH LAESALFVVREAPLPMTEKAEALLTEAARDDLAALLLDFDKTDFSKAALHEAMKAYAERE HHHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH EKKLGAIAQPLRAALTGSTVSPPIDAVMEALGPIEVRKRIFSVLGE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA