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The map label for this gene is ompW [C]

Identifier: 148260950

GI number: 148260950

Start: 2146825

End: 2147490

Strand: Reverse

Name: ompW [C]

Synonym: Acry_1957

Alternate gene names: 148260950

Gene position: 2147490-2146825 (Counterclockwise)

Preceding gene: 148260952

Following gene: 148260949

Centisome position: 63.36

GC content: 66.82

Gene sequence:

>666_bases
ATGAAGGCTTGCATGACGGCTGCCGGCGTCGCCGCGTTGCTCCTCGCCTCGGCGCTGCCGGCCGCCGCACAGGTGACTGG
CCCGACCGGCTTTCACGCCGGCGACATCCTCGTCCGCCTGCGGGCGGATGGCGTCCTGCCGCGCAATTCATCGAGCGACG
TATCGGTCATCGGCGGTCATGTGAAGGCGTCGGACACCGTGATTCCCGAGATCGACCTCTCCTATTTCTTCACGCCCCAC
ATCGCGGTGGAGGCGATCGCCGGCACCTCGCGCCACAATGTCGAGGTCACCGGCTCGGCGCTCGGCACGGTGAAGGTGGG
CAGCGTCTGGGTGCTGCCGCCCACCGTCACACTGCAATACCATTTCGGCGGCATGGGGGATTTCGTCCCCTATGTCGGTG
CCGGCCTGTCGGTCCTGTTCTATTACGGCCAGAGTACCGCCTCCGACCTCAAGTCCCTCGGGCTCGACTCGGTAACCTAC
CGCACGGGCATCGGCCCGGCGATCGAGGCCGGGTTCGACTGGCACGTGCAGGGACGCTGGTATGCGAACTTCGTGGTCAA
GCAGATCTTCGCCGGCACGCGGGCGAGCGTCGGCCATGGCACGATCGTCGCGCATGCCGCGATCAACCCGACGATTGTCG
GCGCCGGCATCGGCTACCGGTTCTGA

Upstream 100 bases:

>100_bases
TGTCCTTGATCCCGATCAAGGTTCGGCTTGTTGCGGTGCAGCAACATGGTGCCATGCCCGGCGCGCCGTGCGCCGGCACT
TCGAGAAGGATCCGACCATC

Downstream 100 bases:

>100_bases
ACCGCACCGCACGGGCCGGCGCCCGCTGGCGTTGACGCCGGCCCGAGGCGCGCTTCCCGACTCGACAGACGCGCCGCCGC
CCTGTATAGCGCGCCTCTCA

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKACMTAAGVAALLLASALPAAAQVTGPTGFHAGDILVRLRADGVLPRNSSSDVSVIGGHVKASDTVIPEIDLSYFFTPH
IAVEAIAGTSRHNVEVTGSALGTVKVGSVWVLPPTVTLQYHFGGMGDFVPYVGAGLSVLFYYGQSTASDLKSLGLDSVTY
RTGIGPAIEAGFDWHVQGRWYANFVVKQIFAGTRASVGHGTIVAHAAINPTIVGAGIGYRF

Sequences:

>Translated_221_residues
MKACMTAAGVAALLLASALPAAAQVTGPTGFHAGDILVRLRADGVLPRNSSSDVSVIGGHVKASDTVIPEIDLSYFFTPH
IAVEAIAGTSRHNVEVTGSALGTVKVGSVWVLPPTVTLQYHFGGMGDFVPYVGAGLSVLFYYGQSTASDLKSLGLDSVTY
RTGIGPAIEAGFDWHVQGRWYANFVVKQIFAGTRASVGHGTIVAHAAINPTIVGAGIGYRF
>Mature_221_residues
MKACMTAAGVAALLLASALPAAAQVTGPTGFHAGDILVRLRADGVLPRNSSSDVSVIGGHVKASDTVIPEIDLSYFFTPH
IAVEAIAGTSRHNVEVTGSALGTVKVGSVWVLPPTVTLQYHFGGMGDFVPYVGAGLSVLFYYGQSTASDLKSLGLDSVTY
RTGIGPAIEAGFDWHVQGRWYANFVVKQIFAGTRASVGHGTIVAHAAINPTIVGAGIGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=222, Percent_Identity=26.5765765765766, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22916; Mature: 22916

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKACMTAAGVAALLLASALPAAAQVTGPTGFHAGDILVRLRADGVLPRNSSSDVSVIGGH
CCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECE
VKASDTVIPEIDLSYFFTPHIAVEAIAGTSRHNVEVTGSALGTVKVGSVWVLPPTVTLQY
EECCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEECCEECEEEECEEEEECCEEEEEE
HFGGMGDFVPYVGAGLSVLFYYGQSTASDLKSLGLDSVTYRTGIGPAIEAGFDWHVQGRW
ECCCCCCHHHHHCCCEEEEEEECCCCHHHHHHCCCCCEEEECCCCCHHHCCCEEEECCCH
YANFVVKQIFAGTRASVGHGTIVAHAAINPTIVGAGIGYRF
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCC
>Mature Secondary Structure
MKACMTAAGVAALLLASALPAAAQVTGPTGFHAGDILVRLRADGVLPRNSSSDVSVIGGH
CCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECE
VKASDTVIPEIDLSYFFTPHIAVEAIAGTSRHNVEVTGSALGTVKVGSVWVLPPTVTLQY
EECCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEECCEECEEEECEEEEECCEEEEEE
HFGGMGDFVPYVGAGLSVLFYYGQSTASDLKSLGLDSVTYRTGIGPAIEAGFDWHVQGRW
ECCCCCCHHHHHCCCEEEEEEECCCCHHHHHHCCCCCEEEECCCCCHHHCCCEEEECCCH
YANFVVKQIFAGTRASVGHGTIVAHAAINPTIVGAGIGYRF
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]