| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is motA [H]
Identifier: 148260893
GI number: 148260893
Start: 2097907
End: 2098767
Strand: Reverse
Name: motA [H]
Synonym: Acry_1900
Alternate gene names: 148260893
Gene position: 2098767-2097907 (Counterclockwise)
Preceding gene: 148260894
Following gene: 148260891
Centisome position: 61.92
GC content: 66.2
Gene sequence:
>861_bases TTGGGAGGCGTTGCATTCCTGCTCGTCTGCGTGTTCGGCGTCTTTATCGTGACGGGCGGGGCGATCGGTCCGCTGCTGAA ATCGATGCCCTTCGAACTCATCACGATCGGCGGCGCCGCGGTCGGCACCTTCGTGGCCGGCAACTCGATGCACGACATCA AGCACACGCTGGCCGGCTTCAAGAAGGTGCTGCGCGGCGGCGCCTTCAAGAAGGCCGACTACACTGACCTGCTGTGCCTG CTGTTCTACCTTGTCCGCCTCGCCGCGACGCGCGGCGCCATGGCGCTGGAGCCGCATATCGAGCGTCCGGAGGAAAGCCC GGTCTTCAAGCACTTCCCGGCCATCCTCAAGAACGAGGAAGCCACCGCGATCATCTGCGACTATCTGCGGATGGTCGGCA TGAACGCCGACGATCCGCACCAGATCGAGGACGTGATGGCCCGCGAACTGCGCAAGACCCTGGCCGAGGAGCTGCACGGC GCCCACACGCTGCAGACGATGGCGGACGGCCTGCCCGCGCTCGGCATCGTCGCCGCGGTGCTCGGCGTGATCAAGACGAT GGCGCATATCAGCCAGCCGCCCGCCGTGCTCGGCGAAATGATCGGCGAGGCGCTGACCGGCACCTTCCTCGGCGTGCTGC TCGCCTATGGCGTGGTGGGGCCGCTCTCGGTGCGGCTGCGCGGCGTGGTCGAGGAGGATTCCCGTTATTTCGAGGTGATC CGCGCGGTGCTGGTCGCGCATCTGCACGGCAACGCGCCGCAGGTCAGCGTCGAGGTCGGCCGCAAGATGGTGCCCAACCT GTTCATGCCGACCTTCCAGGAACTGGAGGAATCCGTGGAGTCCCTCAAGATCGCCGCCTGA
Upstream 100 bases:
>100_bases GCGTCCGGCACTGCCGGAAGGGGTCAAAACAGATGGTGCCAAGGCGCCATGACCCGAACGGAGATGCAATGTTCTGAGAT TTCGGTGAAATATGCTCACT
Downstream 100 bases:
>100_bases CCGTCCTCAACCCTGGCCGCCGAGATGGCGCTGCATGATCACCACGTCGATCCAGCGGCCGAACTTGAACCCCACATCGC GGAGCGTCCCCACCCGCTGG
Product: flagellar motor protein MotA
Products: NA
Alternate protein names: Chemotaxis protein MotA [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MGGVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTLAGFKKVLRGGAFKKADYTDLLCL LFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILKNEEATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHG AHTLQTMADGLPALGIVAAVLGVIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYFEVI RAVLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESVESLKIAA
Sequences:
>Translated_286_residues MGGVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTLAGFKKVLRGGAFKKADYTDLLCL LFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILKNEEATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHG AHTLQTMADGLPALGIVAAVLGVIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYFEVI RAVLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESVESLKIAA >Mature_285_residues GGVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTLAGFKKVLRGGAFKKADYTDLLCLL FYLVRLAATRGAMALEPHIERPEESPVFKHFPAILKNEEATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHGA HTLQTMADGLPALGIVAAVLGVIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYFEVIR AVLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESVESLKIAA
Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]
COG id: COG1291
COG function: function code N; Flagellar motor component
Gene ontology:
Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MotA family [H]
Homologues:
Organism=Escherichia coli, GI1788199, Length=281, Percent_Identity=39.1459074733096, Blast_Score=197, Evalue=9e-52,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000540 - InterPro: IPR022522 - InterPro: IPR002898 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 30697; Mature: 30565
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS01307 MOTA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTLAGF CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEEECCHHHHHHHCCCCHHHHHHHHHHH KKVLRGGAFKKADYTDLLCLLFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILKNEE HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCC ATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHGAHTLQTMADGLPALGIVAAV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LGVIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYFEVI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RAVLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESVESLKIAA HHHHHHHHCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GGVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTLAGF CHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEEECCHHHHHHHCCCCHHHHHHHHHHH KKVLRGGAFKKADYTDLLCLLFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILKNEE HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCC ATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHGAHTLQTMADGLPALGIVAAV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LGVIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYFEVI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RAVLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESVESLKIAA HHHHHHHHCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9161425; 11743193; 11743194 [H]