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The map label for this gene is rsmE [H]

Identifier: 148260870

GI number: 148260870

Start: 2068787

End: 2069503

Strand: Reverse

Name: rsmE [H]

Synonym: Acry_1876

Alternate gene names: 148260870

Gene position: 2069503-2068787 (Counterclockwise)

Preceding gene: 148260877

Following gene: 148260869

Centisome position: 61.06

GC content: 75.17

Gene sequence:

>717_bases
ATGGCCTCGCTCATCCGTCTGCACCTTCCATCACCCTTGTCGCCCGGCGCGACCCTTGCCACATCCGCGGCCCAGGCGCA
CTACCTCGGCGCCGTGATGCGCCGCCGCGCCGGCGATCCGCTGCTGGTCTTCAACGCCGGTTCCGGCGAATTCGCCGCGA
CGATCGGCGCGCTCGACCGCCGCGCCGCCACCCTCGTCCTCGGCGCGCGCACCCGCGCGCCCGAACCCGAACCCGATTGC
TGGCTCTGCTTCGCCCCGCTCCGGCGCGACATGACCGAACTCGTCGTCGAGAAGGCCACCGAGCTCGGCGTCTCCCGCCT
CGTGCCCGTGCTCACCGCCCGCACCCAGCCCGCCCGCCTGCGCGCCGACCGCCTCGCCGCCATCGCCACCGAGGCCGCCG
AACAGTCCGAGCGCCTGACCATCCCCGACATCGCCGAGCCGGCCCCGCTCGCGGCGTTTCTCGCCGCCTTCCCGCCGTCC
CGCCGCCTCTTCGTCGCCGCCGAGCGCCACGCCGCCCCGCCCCTGTCGCCGGCCGATCCGCTTCAACCCCACGCCCTCCT
GGTCGGCCCCGAAGGCGGCCTTGCGCCGGAGGAGCTTGACGCCATGGCCCGCCATGCGTTTGTGTCGCCGGTAACCCTCG
GACCGCGCATCCTGCGCGCCGAAACCGCCGCCATCGCCGGGCTCGCGCGTCTGCTCGCGGGGTCCGCGCCCAGCTGA

Upstream 100 bases:

>100_bases
CGCCAGCAGCGCGAAGGGCCTGAGCCGCGCCGGCAGCCGCGCCACCCATCCCCCGGCCCGGATATCGGTAAAACCTGTCC
CGCCTGCTACAGGGTCAGCC

Downstream 100 bases:

>100_bases
TTTCAGGAGCCCGCTTTGTCCAACCCCGGAGAGGCCGACGCCACCCCGATCGATCCCGCGCAGCCCGCCGCGCGCCAACT
CGCCGACTGGTTTGCCGCCG

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MASLIRLHLPSPLSPGATLATSAAQAHYLGAVMRRRAGDPLLVFNAGSGEFAATIGALDRRAATLVLGARTRAPEPEPDC
WLCFAPLRRDMTELVVEKATELGVSRLVPVLTARTQPARLRADRLAAIATEAAEQSERLTIPDIAEPAPLAAFLAAFPPS
RRLFVAAERHAAPPLSPADPLQPHALLVGPEGGLAPEELDAMARHAFVSPVTLGPRILRAETAAIAGLARLLAGSAPS

Sequences:

>Translated_238_residues
MASLIRLHLPSPLSPGATLATSAAQAHYLGAVMRRRAGDPLLVFNAGSGEFAATIGALDRRAATLVLGARTRAPEPEPDC
WLCFAPLRRDMTELVVEKATELGVSRLVPVLTARTQPARLRADRLAAIATEAAEQSERLTIPDIAEPAPLAAFLAAFPPS
RRLFVAAERHAAPPLSPADPLQPHALLVGPEGGLAPEELDAMARHAFVSPVTLGPRILRAETAAIAGLARLLAGSAPS
>Mature_237_residues
ASLIRLHLPSPLSPGATLATSAAQAHYLGAVMRRRAGDPLLVFNAGSGEFAATIGALDRRAATLVLGARTRAPEPEPDCW
LCFAPLRRDMTELVVEKATELGVSRLVPVLTARTQPARLRADRLAAIATEAAEQSERLTIPDIAEPAPLAAFLAAFPPSR
RLFVAAERHAAPPLSPADPLQPHALLVGPEGGLAPEELDAMARHAFVSPVTLGPRILRAETAAIAGLARLLAGSAPS

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=237, Percent_Identity=29.535864978903, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 24917; Mature: 24786

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLIRLHLPSPLSPGATLATSAAQAHYLGAVMRRRAGDPLLVFNAGSGEFAATIGALDR
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
RAATLVLGARTRAPEPEPDCWLCFAPLRRDMTELVVEKATELGVSRLVPVLTARTQPARL
HHEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RADRLAAIATEAAEQSERLTIPDIAEPAPLAAFLAAFPPSRRLFVAAERHAAPPLSPADP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
LQPHALLVGPEGGLAPEELDAMARHAFVSPVTLGPRILRAETAAIAGLARLLAGSAPS
CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ASLIRLHLPSPLSPGATLATSAAQAHYLGAVMRRRAGDPLLVFNAGSGEFAATIGALDR
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
RAATLVLGARTRAPEPEPDCWLCFAPLRRDMTELVVEKATELGVSRLVPVLTARTQPARL
HHEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RADRLAAIATEAAEQSERLTIPDIAEPAPLAAFLAAFPPSRRLFVAAERHAAPPLSPADP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
LQPHALLVGPEGGLAPEELDAMARHAFVSPVTLGPRILRAETAAIAGLARLLAGSAPS
CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]