| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yceJ [C]
Identifier: 148260868
GI number: 148260868
Start: 2066696
End: 2067313
Strand: Reverse
Name: yceJ [C]
Synonym: Acry_1874
Alternate gene names: 148260868
Gene position: 2067313-2066696 (Counterclockwise)
Preceding gene: 148260869
Following gene: 148260867
Centisome position: 61.0
GC content: 74.11
Gene sequence:
>618_bases ATGACCGCATCCTCCCGCCACGTCTACGACCGCGCCAGCCTCGCCTTCCACTGGCTCACCGCCATCCTGGTCGGCCTGAA CTGGGCCCTTGCCGAGGGGCGCGGCTTCCTGCCGAAAGGCGACGCCCGCGCCCTCGTCCTCTCCGTCCATATCGCGACCG GCTTCGCCATCGCCGCGATCCTGCTCCTCCGCCTCGCCTGGCGCCTCACCCTCGGCCACAAGCCGCCCCGGCTGCCCGGC GTGCTCGAAGCCATCGGCCGCCTCGCGCATGTCCTGCTCTATCTCCTGCTCGCCCTGACGGTCGCCACCGGCATCTCCCG CGCGCTCGGCCACGGCTCCCGCCTCTTCGCCTGGCGGCTCGACGTGCCGATGCCCGCCCCGCTCCACGCGTTCCTGCGCG CCGCCGGCTCGATCCACGGCACCATCGCCGACGCGCTGGTCATCCTCGCCGGCCTGCACGCCCTCGCCGCCATCGCCCAC CACGCCCTCCTGCGCGACGACACGCTGAACCGCATGCTCCCCCTGATCGGTGACCGCCTCCGCGCCCCGCGCCCCTGGAC CCGCCACACCGAGCGTCTGCTCCGCCGCCTCGGCATCCACCCCACCCGCGCCGACTGA
Upstream 100 bases:
>100_bases CGCCGAAGCCGCCCTCTGAGCCTGTCCGGCCCGGGCCGCCGTCGACGCCCTCACCACGGATTGCGTTGACGCGCGGCCCC GCTCCGCTACACCCCGCGGC
Downstream 100 bases:
>100_bases TCGTGGCATCGCCCGCGTCCGGCACCGGAGGGCGGAATGTCATCAAAAGACAATCTAGGCGTGCAAGACATCCATGATGA AACGGCAACGACTGTCGGAA
Product: cytochrome B561
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTASSRHVYDRASLAFHWLTAILVGLNWALAEGRGFLPKGDARALVLSVHIATGFAIAAILLLRLAWRLTLGHKPPRLPG VLEAIGRLAHVLLYLLLALTVATGISRALGHGSRLFAWRLDVPMPAPLHAFLRAAGSIHGTIADALVILAGLHALAAIAH HALLRDDTLNRMLPLIGDRLRAPRPWTRHTERLLRRLGIHPTRAD
Sequences:
>Translated_205_residues MTASSRHVYDRASLAFHWLTAILVGLNWALAEGRGFLPKGDARALVLSVHIATGFAIAAILLLRLAWRLTLGHKPPRLPG VLEAIGRLAHVLLYLLLALTVATGISRALGHGSRLFAWRLDVPMPAPLHAFLRAAGSIHGTIADALVILAGLHALAAIAH HALLRDDTLNRMLPLIGDRLRAPRPWTRHTERLLRRLGIHPTRAD >Mature_204_residues TASSRHVYDRASLAFHWLTAILVGLNWALAEGRGFLPKGDARALVLSVHIATGFAIAAILLLRLAWRLTLGHKPPRLPGV LEAIGRLAHVLLYLLLALTVATGISRALGHGSRLFAWRLDVPMPAPLHAFLRAAGSIHGTIADALVILAGLHALAAIAHH ALLRDDTLNRMLPLIGDRLRAPRPWTRHTERLLRRLGIHPTRAD
Specific function: Unknown
COG id: COG3038
COG function: function code C; Cytochrome B561
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787296, Length=176, Percent_Identity=34.6590909090909, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22355; Mature: 22224
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSRHVYDRASLAFHWLTAILVGLNWALAEGRGFLPKGDARALVLSVHIATGFAIAAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHH LLLRLAWRLTLGHKPPRLPGVLEAIGRLAHVLLYLLLALTVATGISRALGHGSRLFAWRL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DVPMPAPLHAFLRAAGSIHGTIADALVILAGLHALAAIAHHALLRDDTLNRMLPLIGDRL CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAPRPWTRHTERLLRRLGIHPTRAD CCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TASSRHVYDRASLAFHWLTAILVGLNWALAEGRGFLPKGDARALVLSVHIATGFAIAAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHH LLLRLAWRLTLGHKPPRLPGVLEAIGRLAHVLLYLLLALTVATGISRALGHGSRLFAWRL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DVPMPAPLHAFLRAAGSIHGTIADALVILAGLHALAAIAHHALLRDDTLNRMLPLIGDRL CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAPRPWTRHTERLLRRLGIHPTRAD CCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA