| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260866
Identifier: 148260866
GI number: 148260866
Start: 2064736
End: 2065431
Strand: Reverse
Name: 148260866
Synonym: Acry_1872
Alternate gene names: NA
Gene position: 2065431-2064736 (Counterclockwise)
Preceding gene: 148260867
Following gene: 148260865
Centisome position: 60.94
GC content: 73.56
Gene sequence:
>696_bases ATGCATCTTCCCCATCCTGAATTTCACCTTCTCGGCCGCACCGGCTGGCTCCGCGCCGCCGTGCTCGGCGCCAATGACGG CATCATCTCCACCGCCAGCCTCATCCTCGGCGTGATCTCCGCGAGCGGCGTCCGGCACGATGCGCTGGTCGCCGGCGTCG CCGGCCTCGTCGCCGGAGCGATGGCGATGGCCGCCGGCGAATACGTCTCGGTCAGCTCCCAGGCCGATACCGAAACCGCC GCCCTGGCCAAGGAACGCGCCGAACTCGCCGAAAGCCCGGCCTCCGAGCACGCCGAACTCGCCGCGATCTACGTCGCCCG TGGCCTCGACCCCGCTCTCGCCGGCGCCGTCGCCACCCAGCTCATGGCGCATGACGCGCTCGGCGCCCATGCCCGCGACG AGCTCGGCCTCACCGAATTCACCGCCGCCAACCCGATCCAGGCCGCCATGGCCTCCGCCGCCACCTTCGCCGTCGGCGCC GCCGCCCCGCTCATCCTCGCCGCCACCCTGCCGAAGCCCGTGCTCTCCGCCGGAATCGGCCTCGGCGCCCTCGTCTTCCT CGCCGTGCTCGGCGCCGTCGGCGGCCGCGCCGGCGGCGCGCCGATGCTCAAACCCGCCCTGCGCGTCGCCTTCTGGGGGG CGCTCGCCATGGCCGCCACCACGCTGATCGGCCACCTGTTCGGCGCCACCGTCTAG
Upstream 100 bases:
>100_bases GTTCGCCGCCGACGCCCCGCCCCGCATGGCCAGCTTGGCCCGCCCGCCCGCCGGCCTATGATACGGCGCACATCATGGCC GCTGCGGCGACGGAGCAAAA
Downstream 100 bases:
>100_bases TTTTCCGCTCCCGAACGCCATCGGCGTTCGGGAGCGGAACACCAGTTCATGTTCCGATCCTCCCGGACCGCGTAAAGATT TCCTAACGGAATTCTTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Nodulin; Nodulin-Related Protein; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Nodulin-Related Transmembrane Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF; Nodulin-
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MHLPHPEFHLLGRTGWLRAAVLGANDGIISTASLILGVISASGVRHDALVAGVAGLVAGAMAMAAGEYVSVSSQADTETA ALAKERAELAESPASEHAELAAIYVARGLDPALAGAVATQLMAHDALGAHARDELGLTEFTAANPIQAAMASAATFAVGA AAPLILAATLPKPVLSAGIGLGALVFLAVLGAVGGRAGGAPMLKPALRVAFWGALAMAATTLIGHLFGATV
Sequences:
>Translated_231_residues MHLPHPEFHLLGRTGWLRAAVLGANDGIISTASLILGVISASGVRHDALVAGVAGLVAGAMAMAAGEYVSVSSQADTETA ALAKERAELAESPASEHAELAAIYVARGLDPALAGAVATQLMAHDALGAHARDELGLTEFTAANPIQAAMASAATFAVGA AAPLILAATLPKPVLSAGIGLGALVFLAVLGAVGGRAGGAPMLKPALRVAFWGALAMAATTLIGHLFGATV >Mature_231_residues MHLPHPEFHLLGRTGWLRAAVLGANDGIISTASLILGVISASGVRHDALVAGVAGLVAGAMAMAAGEYVSVSSQADTETA ALAKERAELAESPASEHAELAAIYVARGLDPALAGAVATQLMAHDALGAHARDELGLTEFTAANPIQAAMASAATFAVGA AAPLILAATLPKPVLSAGIGLGALVFLAVLGAVGGRAGGAPMLKPALRVAFWGALAMAATTLIGHLFGATV
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22804; Mature: 22804
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLPHPEFHLLGRTGWLRAAVLGANDGIISTASLILGVISASGVRHDALVAGVAGLVAGA CCCCCCCEEEECCCCHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MAMAAGEYVSVSSQADTETAALAKERAELAESPASEHAELAAIYVARGLDPALAGAVATQ HHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LMAHDALGAHARDELGLTEFTAANPIQAAMASAATFAVGAAAPLILAATLPKPVLSAGIG HHHHHHHCCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH LGALVFLAVLGAVGGRAGGAPMLKPALRVAFWGALAMAATTLIGHLFGATV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLPHPEFHLLGRTGWLRAAVLGANDGIISTASLILGVISASGVRHDALVAGVAGLVAGA CCCCCCCEEEECCCCHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MAMAAGEYVSVSSQADTETAALAKERAELAESPASEHAELAAIYVARGLDPALAGAVATQ HHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LMAHDALGAHARDELGLTEFTAANPIQAAMASAATFAVGAAAPLILAATLPKPVLSAGIG HHHHHHHCCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH LGALVFLAVLGAVGGRAGGAPMLKPALRVAFWGALAMAATTLIGHLFGATV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA