| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is hutC [H]
Identifier: 148260746
GI number: 148260746
Start: 1931858
End: 1932622
Strand: Reverse
Name: hutC [H]
Synonym: Acry_1750
Alternate gene names: 148260746
Gene position: 1932622-1931858 (Counterclockwise)
Preceding gene: 148260747
Following gene: 148260741
Centisome position: 57.02
GC content: 73.99
Gene sequence:
>765_bases ATGGCGCCTCCCGATCGCGAACCCGCCGCGCGGGTGCCGCTCTACGCCCGGGTGAAGGAGGCGATCGTCGAGCGCATCGC CAGCGGCCAGATCGGCCCCGGCGGCCGCCTGCCCTCCGAGCACGAGCTGATGGCCGAATTCGGCGTCTCGCGGATGACGG CGCATCGCGCCCTGCGCGAACTCTCCGCCGCCGGCCTCGTCGCTCGCGTGCAGGGCAGGGGCAGCTTCGCCGCGCCGCCG CGCCCGCGCCTCGAATGGCTCGAAATCCGCGACATCTCCGATGAGATCGTCGCCTCCGGCCACCGCCACCGCGTCCGCGT CCTCGCCCAGGAAGCCACCCGCGCCCGCGCCGACCAGGCGCTCGCCTTCGGCCTGCGCCCCGGCGCGCGCATCTTCCACG CCACCCTGCTGCATTACGAGGACGACGTGCCGGTGCAGATCGAGGACCGGCTGGTCTCGCCCCGCTTCGCCCCGGATTTC CTCGAACAGGATTTCACGAAGGAGACCGTCGCCGCCTATCTCCTCCGCCTCGGCCCGGCGACCGAGACCGAGCACGTCGT CTACGCGACCACGCCCTCGCCCGAGATCCGCGCGCTGCTCGAGATCGGGCGCGACGAGGAGCAGGCCTGCCTCGTCGTCC TCCGCCGCACCTGGAGCGGCGGGCTTCCCGCCACCCAGACCGAGTTCATCCACCCCGGCGCCCGCTACGCGCTCGGCACC CGCTCCTCGATGGGCGACCGGCCGGACGGCCCGGCCGCCCCCTGA
Upstream 100 bases:
>100_bases AGGCGACGATGCTCCGCCTGCCCGGCTTCGCCGCGCTGCAGGCGAGCCTCACCCGCATCCTCGCGCGGGTCGCCGCCGCC GTGCCGGCGCTGGTCTGACC
Downstream 100 bases:
>100_bases AGCTCAGCCGGTGATCCCCGGCAGGTTCAGCCCGTTCTCCCGCGCGCAGTCGATGGCGATGTCGTAGCCGGCATCGGCAT GGCGCATCACCCCGGTCGCC
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAPPDREPAARVPLYARVKEAIVERIASGQIGPGGRLPSEHELMAEFGVSRMTAHRALRELSAAGLVARVQGRGSFAAPP RPRLEWLEIRDISDEIVASGHRHRVRVLAQEATRARADQALAFGLRPGARIFHATLLHYEDDVPVQIEDRLVSPRFAPDF LEQDFTKETVAAYLLRLGPATETEHVVYATTPSPEIRALLEIGRDEEQACLVVLRRTWSGGLPATQTEFIHPGARYALGT RSSMGDRPDGPAAP
Sequences:
>Translated_254_residues MAPPDREPAARVPLYARVKEAIVERIASGQIGPGGRLPSEHELMAEFGVSRMTAHRALRELSAAGLVARVQGRGSFAAPP RPRLEWLEIRDISDEIVASGHRHRVRVLAQEATRARADQALAFGLRPGARIFHATLLHYEDDVPVQIEDRLVSPRFAPDF LEQDFTKETVAAYLLRLGPATETEHVVYATTPSPEIRALLEIGRDEEQACLVVLRRTWSGGLPATQTEFIHPGARYALGT RSSMGDRPDGPAAP >Mature_253_residues APPDREPAARVPLYARVKEAIVERIASGQIGPGGRLPSEHELMAEFGVSRMTAHRALRELSAAGLVARVQGRGSFAAPPR PRLEWLEIRDISDEIVASGHRHRVRVLAQEATRARADQALAFGLRPGARIFHATLLHYEDDVPVQIEDRLVSPRFAPDFL EQDFTKETVAAYLLRLGPATETEHVVYATTPSPEIRALLEIGRDEEQACLVVLRRTWSGGLPATQTEFIHPGARYALGTR SSMGDRPDGPAAP
Specific function: Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer [H]
COG id: COG2188
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082252, Length=149, Percent_Identity=29.5302013422819, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786950, Length=199, Percent_Identity=25.6281407035176, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010248 - InterPro: IPR000524 - InterPro: IPR011663 - InterPro: IPR011991 [H]
Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]
EC number: NA
Molecular weight: Translated: 27914; Mature: 27783
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPDREPAARVPLYARVKEAIVERIASGQIGPGGRLPSEHELMAEFGVSRMTAHRALRE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHH LSAAGLVARVQGRGSFAAPPRPRLEWLEIRDISDEIVASGHRHRVRVLAQEATRARADQA HHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHH LAFGLRPGARIFHATLLHYEDDVPVQIEDRLVSPRFAPDFLEQDFTKETVAAYLLRLGPA HHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TETEHVVYATTPSPEIRALLEIGRDEEQACLVVLRRTWSGGLPATQTEFIHPGARYALGT CCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHCCCC RSSMGDRPDGPAAP CCCCCCCCCCCCCC >Mature Secondary Structure APPDREPAARVPLYARVKEAIVERIASGQIGPGGRLPSEHELMAEFGVSRMTAHRALRE CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHH LSAAGLVARVQGRGSFAAPPRPRLEWLEIRDISDEIVASGHRHRVRVLAQEATRARADQA HHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHH LAFGLRPGARIFHATLLHYEDDVPVQIEDRLVSPRFAPDFLEQDFTKETVAAYLLRLGPA HHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TETEHVVYATTPSPEIRALLEIGRDEEQACLVVLRRTWSGGLPATQTEFIHPGARYALGT CCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHCCCC RSSMGDRPDGPAAP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2203753 [H]