| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260735
Identifier: 148260735
GI number: 148260735
Start: 1917922
End: 1918362
Strand: Reverse
Name: 148260735
Synonym: Acry_1739
Alternate gene names: NA
Gene position: 1918362-1917922 (Counterclockwise)
Preceding gene: 148260736
Following gene: 148260734
Centisome position: 56.6
GC content: 69.61
Gene sequence:
>441_bases ATGCTCCGACGCCTCTCCCGCACCCTGCGCCGCCCGGATGCGCGCCTGCTCGCCGGTCTCGCCGCGGCGGGTTTCTGCAC CGCGATCGCCGCCGCCGCCCCGCTTCCCGCCCTCTACACCAAGGCCCAGGCCAAGGCCGGGCACGAGGCCTTCGAGACCC ATTGCTCGATGTGCCACGGCAAGAACCTGCAGGGCATCAGCGGCCCCGCCCTGGTCGGCCAGGGCTTCGCCAGCGCCTCG AACAACTACACCGTCGCCGCGATCTTCGACGAGCTGTCGCAGCAGATGCCGGCCGGCGCCCCCGGCAGCCTGCCGCACAA GGACTATGCCGACATCATGGCCTTCATCCTGAGCAAGAACGGCTACCCCGCCGGCAAGACGGCGCTGACCTATTCCGCCG CCCAGTCCTCGACCGCGAAACTGGTCTCCCAGGTGAAATGA
Upstream 100 bases:
>100_bases AAGGACGGAACCCTTGCCCGTCTCGTCGCCCCCTACCATACCCCGTGACTCGCGGCGGGCAGGCTCGCCCGCCGGTTCAC CCGCTGAAAGGATACCCCTG
Downstream 100 bases:
>100_bases CTCGGGCCGCAAGCCGGCGGCCGGCCCTGCGCCGGCCGTCGGCGCGGCATCCCTTCATTTCTCGAAAATAACGACAAATC CCATAGAGCGTTACAGTCCG
Product: cytochrome c, class I
Products: NA
Alternate protein names: Cytochrome C; Class I Cytochrome C; Pyrrolo-Quinoline Quinone
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLRRLSRTLRRPDARLLAGLAAAGFCTAIAAAAPLPALYTKAQAKAGHEAFETHCSMCHGKNLQGISGPALVGQGFASAS NNYTVAAIFDELSQQMPAGAPGSLPHKDYADIMAFILSKNGYPAGKTALTYSAAQSSTAKLVSQVK
Sequences:
>Translated_146_residues MLRRLSRTLRRPDARLLAGLAAAGFCTAIAAAAPLPALYTKAQAKAGHEAFETHCSMCHGKNLQGISGPALVGQGFASAS NNYTVAAIFDELSQQMPAGAPGSLPHKDYADIMAFILSKNGYPAGKTALTYSAAQSSTAKLVSQVK >Mature_146_residues MLRRLSRTLRRPDARLLAGLAAAGFCTAIAAAAPLPALYTKAQAKAGHEAFETHCSMCHGKNLQGISGPALVGQGFASAS NNYTVAAIFDELSQQMPAGAPGSLPHKDYADIMAFILSKNGYPAGKTALTYSAAQSSTAKLVSQVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15153; Mature: 15153
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRLSRTLRRPDARLLAGLAAAGFCTAIAAAAPLPALYTKAQAKAGHEAFETHCSMCHG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCC KNLQGISGPALVGQGFASASNNYTVAAIFDELSQQMPAGAPGSLPHKDYADIMAFILSKN CCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC GYPAGKTALTYSAAQSSTAKLVSQVK CCCCCCHHEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRRLSRTLRRPDARLLAGLAAAGFCTAIAAAAPLPALYTKAQAKAGHEAFETHCSMCHG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCC KNLQGISGPALVGQGFASASNNYTVAAIFDELSQQMPAGAPGSLPHKDYADIMAFILSKN CCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC GYPAGKTALTYSAAQSSTAKLVSQVK CCCCCCHHEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA