| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260638
Identifier: 148260638
GI number: 148260638
Start: 1812385
End: 1813362
Strand: Reverse
Name: 148260638
Synonym: Acry_1640
Alternate gene names: NA
Gene position: 1813362-1812385 (Counterclockwise)
Preceding gene: 148260639
Following gene: 148260635
Centisome position: 53.5
GC content: 71.78
Gene sequence:
>978_bases TTGGCCTACCCGGTCTCGGATCATTTCGACGGCGCGCGCTTCTTCAACCCCGAAGGTGCGCGCCGCCGCACCGGCCGCTT CCCGATGCTCCGCTGGGTGACACGGCGCGAGGGACGGGCAAAATGGCCCGACCGGGTGGAAAACCGGACTTTTGCTCCGC CGCCCGCCGAGGTGGCGGAGGGCGAGGCGGCGGTGACGTTCATCGGCCATGCGAGCTTCCTGATCCGCCTGCCGGGCCTC GTTCTACTGACCGACCCGATCCTCTCGGAGCGCTGCTCGCCGGTCGGCTGGGCCGGGCCGCGCCGGGTCCGCCCGCCGGG CCTCACGCTCGACGCGATGCCGAAGCCGGACGCGATCCTGCTCTCGCACAACCATTACGACCATTGCGACATCCCGACCC TCGCCGCCCTGCACGCGCGCTTCGGCCGCACCCCGATCTTCGCGCCGCTCGGCAACCGCGCCTTTCTCACCCGCAAGGGG CTCGGCCCGGTCACCGAACTGGACTGGTGGCACCATGCCGAGCTGCACGGCACCCGCATCACCCTGACCCCGGCGCGGCA TTTCGCCGCCCGCACCCTGCGCGACCGCAACACCACGCTCTGGGGCGGTTTCATGCTGCGCCACGCCGCCGGGCAGCTCT ATTTCGCCGGCGACACCGGCTATACCGGCTATTTCCGCATGATCCGCGAGCGCCTCGGCCGCCCCGGCCTCGCCTTGCTG CCGATCGGCGCCTACGAGCCGCGCTGGTTCATGGGCAATGTCCACATGAACCCGGCGGATGCGGTGCGCGCCTTCGCCGA GCTCGGGGCCGCCCGCGCGGTGGGCATGCATTTCGGCACGTTCCAACTCACCGACGAGGCGATCGACGCCCCGGAGCGCG ACCTCGCCGCCGCCCGCGAGGCCGCCGGCCTGCCGGCAGCGTGCTTCACCACGCTCGATGTCGGCGAGACCGGCCTGTTC CGCCTCGATCCCGGCTGA
Upstream 100 bases:
>100_bases GCGATGCCTGCGCCTTCCTCTGCTCGGCACAGGCGGGCTTCATCGTCGGCCAGAACCTGCTGCTCGATGGCGGCGCCTTC AACGCGGCGTTCGGCTGACC
Downstream 100 bases:
>100_bases TTGACCTCAGCCGGCGCGAAAATCCGGCTGATTGACCTCAGCCGGATCAAAAACCCGGCTGATTGGGTTCAGCCCCGAAT CGCCTCGATCCGCGGCGGGT
Product: Zn-dependent hydrolase of the beta-lactamase fold-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MAYPVSDHFDGARFFNPEGARRRTGRFPMLRWVTRREGRAKWPDRVENRTFAPPPAEVAEGEAAVTFIGHASFLIRLPGL VLLTDPILSERCSPVGWAGPRRVRPPGLTLDAMPKPDAILLSHNHYDHCDIPTLAALHARFGRTPIFAPLGNRAFLTRKG LGPVTELDWWHHAELHGTRITLTPARHFAARTLRDRNTTLWGGFMLRHAAGQLYFAGDTGYTGYFRMIRERLGRPGLALL PIGAYEPRWFMGNVHMNPADAVRAFAELGAARAVGMHFGTFQLTDEAIDAPERDLAAAREAAGLPAACFTTLDVGETGLF RLDPG
Sequences:
>Translated_325_residues MAYPVSDHFDGARFFNPEGARRRTGRFPMLRWVTRREGRAKWPDRVENRTFAPPPAEVAEGEAAVTFIGHASFLIRLPGL VLLTDPILSERCSPVGWAGPRRVRPPGLTLDAMPKPDAILLSHNHYDHCDIPTLAALHARFGRTPIFAPLGNRAFLTRKG LGPVTELDWWHHAELHGTRITLTPARHFAARTLRDRNTTLWGGFMLRHAAGQLYFAGDTGYTGYFRMIRERLGRPGLALL PIGAYEPRWFMGNVHMNPADAVRAFAELGAARAVGMHFGTFQLTDEAIDAPERDLAAAREAAGLPAACFTTLDVGETGLF RLDPG >Mature_324_residues AYPVSDHFDGARFFNPEGARRRTGRFPMLRWVTRREGRAKWPDRVENRTFAPPPAEVAEGEAAVTFIGHASFLIRLPGLV LLTDPILSERCSPVGWAGPRRVRPPGLTLDAMPKPDAILLSHNHYDHCDIPTLAALHARFGRTPIFAPLGNRAFLTRKGL GPVTELDWWHHAELHGTRITLTPARHFAARTLRDRNTTLWGGFMLRHAAGQLYFAGDTGYTGYFRMIRERLGRPGLALLP IGAYEPRWFMGNVHMNPADAVRAFAELGAARAVGMHFGTFQLTDEAIDAPERDLAAAREAAGLPAACFTTLDVGETGLFR LDPG
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=326, Percent_Identity=37.1165644171779, Blast_Score=210, Evalue=1e-54, Organism=Homo sapiens, GI170932481, Length=326, Percent_Identity=37.1165644171779, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17543100, Length=272, Percent_Identity=36.0294117647059, Blast_Score=177, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17543102, Length=272, Percent_Identity=36.0294117647059, Blast_Score=177, Evalue=6e-45, Organism=Caenorhabditis elegans, GI25148824, Length=272, Percent_Identity=36.0294117647059, Blast_Score=177, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17543104, Length=272, Percent_Identity=37.5, Blast_Score=174, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6325154, Length=287, Percent_Identity=33.4494773519164, Blast_Score=155, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36004; Mature: 35872
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYPVSDHFDGARFFNPEGARRRTGRFPMLRWVTRREGRAKWPDRVENRTFAPPPAEVAE CCCCCCCCCCCCEEECCCCCCHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHCC GEAAVTFIGHASFLIRLPGLVLLTDPILSERCSPVGWAGPRRVRPPGLTLDAMPKPDAIL CCEEEEEEECCEEEHHCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEE LSHNHYDHCDIPTLAALHARFGRTPIFAPLGNRAFLTRKGLGPVTELDWWHHAELHGTRI EECCCCCCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCEECCCEE TLTPARHFAARTLRDRNTTLWGGFMLRHAAGQLYFAGDTGYTGYFRMIRERLGRPGLALL EECHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCEEEE PIGAYEPRWFMGNVHMNPADAVRAFAELGAARAVGMHFGTFQLTDEAIDAPERDLAAARE ECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEECCEEEECHHHHCCCHHHHHHHHH AAGLPAACFTTLDVGETGLFRLDPG HCCCCHHHEEEEECCCCCEEEECCC >Mature Secondary Structure AYPVSDHFDGARFFNPEGARRRTGRFPMLRWVTRREGRAKWPDRVENRTFAPPPAEVAE CCCCCCCCCCCEEECCCCCCHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHCC GEAAVTFIGHASFLIRLPGLVLLTDPILSERCSPVGWAGPRRVRPPGLTLDAMPKPDAIL CCEEEEEEECCEEEHHCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEE LSHNHYDHCDIPTLAALHARFGRTPIFAPLGNRAFLTRKGLGPVTELDWWHHAELHGTRI EECCCCCCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCEECCCEE TLTPARHFAARTLRDRNTTLWGGFMLRHAAGQLYFAGDTGYTGYFRMIRERLGRPGLALL EECHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCEEEE PIGAYEPRWFMGNVHMNPADAVRAFAELGAARAVGMHFGTFQLTDEAIDAPERDLAAARE ECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEECCEEEECHHHHCCCHHHHHHHHH AAGLPAACFTTLDVGETGLFRLDPG HCCCCHHHEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]