| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is cysK [H]
Identifier: 148260489
GI number: 148260489
Start: 1652650
End: 1653657
Strand: Reverse
Name: cysK [H]
Synonym: Acry_1489
Alternate gene names: 148260489
Gene position: 1653657-1652650 (Counterclockwise)
Preceding gene: 148260494
Following gene: 148260486
Centisome position: 48.79
GC content: 63.59
Gene sequence:
>1008_bases GTGACAGTGCAATCAGCGACCTCGATCGCCGGCGGATTCATCGGTGCGATCGGCCATACACCCTTGATCCGCCTGCGTCG TGCATCCGAGGCGACTGGCTGTGAAATCCTTGGCAAGGCCGAATTCATGAATCCGGGCGGCTCTGTGAAGGATCGTGCGG CGCTCGCGATTATCGAGGATGCCGAGGCGCGGGGCCTGCTCACGCCGGGCCGGTCAGGCACCATCGTCGAGGGAACGGCG GGCAACACCGGGATTGGCCTCACGCTGGTGGCCAATGCGCGCGGCTATCGCAGCATTATTGTGATGCCCGAGACGCAGAG CCAGGAAAAGAAGGATTTTCTCCGCATGATCGGCGCCGATCTGCGCCTCGTGCCGGCAAAACCCTATCGCGATCCCGGCA ACTACGTTCACGTTTCCCGTCGTATTGCCGAGGAATGCGGCGGCTACTGGGCGAACCAGTTCGACAACCTTGCCAACCGG GAGGGGCATCGCCGCACGACCGGGCCGGAGATATGGGCGCAGACGGGCGGCAGGATCGATGCCTTCACCTGCGCTTGCGG AACCGGCGGCACGCTCGCCGGCGTCGCCTTGGCGTTGAAGGAGCGCAATCCGGCCACCCGCATCGTGCTTGCCGACCCCG AAGGCAGCGCCTTGCATTCGTGGATCAAGACCGGTGAGATAACGTCTTCCGGATCATCGATTTCCGAGGGAATCGGCCAG GGACGGGTTACGGCCAATCTGGAAGGCGCGCCAATTGATGATGCGGTGCGCATTCCCGATACCGAAATGCTCGGGCAGGT CTACGACCTGATGATCCACGAGGGCCTCTCGGTCGGTGGTTCCGCGGGAATCAATGTCGCAGCGGCCATTCGCGTCGCAC ACGAAATGGGGCCGGGCCACACGATCGTGACGATCCTTTGCGATGGCGCGTCGCGTTACCAGTCGAAGCTGTTCAACCCG GAATTCCTGCGCGGCAAGGGGCTGCCGGTGCCGCCCTGGCTCGGGTAA
Upstream 100 bases:
>100_bases CAACCATATCATCCTCCGGTTCATCGCCTTCCTGGCATCGAAGCATTGTTGTCCGACGCCAGGTTCTGATGCAAGACGGT TACACGGGAGAAAGAACAGC
Downstream 100 bases:
>100_bases GGGGGAATCAGACGCGACGGTAGGTCAGGACCAGAACATCCCGGAAGGCGGGGCGCGCGGGGTCGATCGGGACCACCGGC GTCACGCCATGAAACACGCG
Product: cysteine synthase A
Products: NA
Alternate protein names: CSase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTVQSATSIAGGFIGAIGHTPLIRLRRASEATGCEILGKAEFMNPGGSVKDRAALAIIEDAEARGLLTPGRSGTIVEGTA GNTGIGLTLVANARGYRSIIVMPETQSQEKKDFLRMIGADLRLVPAKPYRDPGNYVHVSRRIAEECGGYWANQFDNLANR EGHRRTTGPEIWAQTGGRIDAFTCACGTGGTLAGVALALKERNPATRIVLADPEGSALHSWIKTGEITSSGSSISEGIGQ GRVTANLEGAPIDDAVRIPDTEMLGQVYDLMIHEGLSVGGSAGINVAAAIRVAHEMGPGHTIVTILCDGASRYQSKLFNP EFLRGKGLPVPPWLG
Sequences:
>Translated_335_residues MTVQSATSIAGGFIGAIGHTPLIRLRRASEATGCEILGKAEFMNPGGSVKDRAALAIIEDAEARGLLTPGRSGTIVEGTA GNTGIGLTLVANARGYRSIIVMPETQSQEKKDFLRMIGADLRLVPAKPYRDPGNYVHVSRRIAEECGGYWANQFDNLANR EGHRRTTGPEIWAQTGGRIDAFTCACGTGGTLAGVALALKERNPATRIVLADPEGSALHSWIKTGEITSSGSSISEGIGQ GRVTANLEGAPIDDAVRIPDTEMLGQVYDLMIHEGLSVGGSAGINVAAAIRVAHEMGPGHTIVTILCDGASRYQSKLFNP EFLRGKGLPVPPWLG >Mature_334_residues TVQSATSIAGGFIGAIGHTPLIRLRRASEATGCEILGKAEFMNPGGSVKDRAALAIIEDAEARGLLTPGRSGTIVEGTAG NTGIGLTLVANARGYRSIIVMPETQSQEKKDFLRMIGADLRLVPAKPYRDPGNYVHVSRRIAEECGGYWANQFDNLANRE GHRRTTGPEIWAQTGGRIDAFTCACGTGGTLAGVALALKERNPATRIVLADPEGSALHSWIKTGEITSSGSSISEGIGQG RVTANLEGAPIDDAVRIPDTEMLGQVYDLMIHEGLSVGGSAGINVAAAIRVAHEMGPGHTIVTILCDGASRYQSKLFNPE FLRGKGLPVPPWLG
Specific function: Two Cysteine Synthase Enzymes Are Found. Both Catalyze The Same Reaction. Cysteine Synthase B Can Also Use Thiosulfate In Place Of Sulfide To Give Cysteine Thiosulfonate As A Product. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=325, Percent_Identity=40, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI295821200, Length=325, Percent_Identity=40, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI4557415, Length=325, Percent_Identity=40, Blast_Score=217, Evalue=1e-56, Organism=Escherichia coli, GI2367138, Length=315, Percent_Identity=36.8253968253968, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI1788754, Length=317, Percent_Identity=39.1167192429022, Blast_Score=155, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17535051, Length=312, Percent_Identity=35.8974358974359, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17562970, Length=299, Percent_Identity=36.7892976588629, Blast_Score=171, Evalue=4e-43, Organism=Caenorhabditis elegans, GI32566674, Length=299, Percent_Identity=36.7892976588629, Blast_Score=171, Evalue=4e-43, Organism=Caenorhabditis elegans, GI115535073, Length=303, Percent_Identity=38.6138613861386, Blast_Score=160, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17534315, Length=332, Percent_Identity=33.433734939759, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17561720, Length=318, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI25147552, Length=324, Percent_Identity=33.0246913580247, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI32566672, Length=214, Percent_Identity=33.6448598130841, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71996324, Length=335, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321449, Length=323, Percent_Identity=41.1764705882353, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6321594, Length=327, Percent_Identity=35.474006116208, Blast_Score=178, Evalue=9e-46, Organism=Drosophila melanogaster, GI24643623, Length=330, Percent_Identity=34.5454545454545, Blast_Score=171, Evalue=5e-43, Organism=Drosophila melanogaster, GI20129101, Length=330, Percent_Identity=34.5454545454545, Blast_Score=171, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 35224; Mature: 35092
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQSATSIAGGFIGAIGHTPLIRLRRASEATGCEILGKAEFMNPGGSVKDRAALAIIED CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCEECCCCCCCCCCEEEEEEEC AEARGLLTPGRSGTIVEGTAGNTGIGLTLVANARGYRSIIVMPETQSQEKKDFLRMIGAD CCCCCEECCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCC LRLVPAKPYRDPGNYVHVSRRIAEECGGYWANQFDNLANREGHRRTTGPEIWAQTGGRID EEEECCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEE AFTCACGTGGTLAGVALALKERNPATRIVLADPEGSALHSWIKTGEITSSGSSISEGIGQ EEEEECCCCCHHHHHEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCC GRVTANLEGAPIDDAVRIPDTEMLGQVYDLMIHEGLSVGGSAGINVAAAIRVAHEMGPGH CEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC TIVTILCDGASRYQSKLFNPEFLRGKGLPVPPWLG EEEEEEECCHHHHHHHCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure TVQSATSIAGGFIGAIGHTPLIRLRRASEATGCEILGKAEFMNPGGSVKDRAALAIIED CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCEECCCCCCCCCCEEEEEEEC AEARGLLTPGRSGTIVEGTAGNTGIGLTLVANARGYRSIIVMPETQSQEKKDFLRMIGAD CCCCCEECCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCC LRLVPAKPYRDPGNYVHVSRRIAEECGGYWANQFDNLANREGHRRTTGPEIWAQTGGRID EEEECCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEE AFTCACGTGGTLAGVALALKERNPATRIVLADPEGSALHSWIKTGEITSSGSSISEGIGQ EEEEECCCCCHHHHHEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCC GRVTANLEGAPIDDAVRIPDTEMLGQVYDLMIHEGLSVGGSAGINVAAAIRVAHEMGPGH CEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC TIVTILCDGASRYQSKLFNPEFLRGKGLPVPPWLG EEEEEEECCHHHHHHHCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA