| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148260470
Identifier: 148260470
GI number: 148260470
Start: 1632814
End: 1633695
Strand: Reverse
Name: 148260470
Synonym: Acry_1470
Alternate gene names: NA
Gene position: 1633695-1632814 (Counterclockwise)
Preceding gene: 148260471
Following gene: 148260469
Centisome position: 48.2
GC content: 62.36
Gene sequence:
>882_bases ATGAAAGTCAAAGTGATCAGAGCGGCATCAATGCGCGAGGCATTCGCGGAGGCTCATCGCATCCTCGGTCCCGATGCGCT GATCCTCGATAGCCGCCGTCGAGGACGCGAGTTCGAGATTACGGTCGCACTGGACCCTGAGCTGCCGCCTGATCCGGCCA ACCCCTGGCGCCAGGCGTTGTCTTTCCATGGCATTCCGGCGCACATCGCGTCTGCCTGGGCAGACCAGCCGCCCGACGCC GCCGTTGCTGGCAGCCTGTCGTTTGGGAAGCTTGATTTCGACCGACCGTTGGTCATTGCGGGACCGCCAGGCGCCGGCAA GACGATGACGACAGTTAAACTGGCGACACGATTTGTTCTTGCTGGTGTCCGTCCAACAGTAATTAACGCCGACCAGAACC GGGCCGGTGCATCAGCGCAGTTGGCCGCACTGTGTCGCATCCTGCGCGCCGAGTTCATCGACACGGCTTCGAAAAAGGGT GGAATGCGGCGTCGTCCGGCAAGCCGCCGTCCGACGCTGATCGATTTGCCTGGGATGGATCCGTTCGACAAATCTGAAAT GGACAATTTGCGATCGATGGTTGAGGAAGTCTCTGGCGTTGCCGCGCTGGTAATGCCCGCGGGACTTGATGCGGCCGACA GCGTGGAAATTGCTTCTCGCTTTCATGAGGCGGGTGCGACGGCTCTGATTCCGACGCGCCTTGATGTGTCGCGCCGCCTT GGTGGCCTTGTTGCCGCGGCAGGCTCCGTGCCGCTCCAGCTAACCGAGGCCGGCACGTCTGGTCGCGTCAGCGATGCGCT CGAAACGGTCACGCCAGCCTTTCTGGTCCGGCGCCTGCTTGATGCCGGTCGTGTTCAGGAGCCGGTCGCCAATGCAGCCT GA
Upstream 100 bases:
>100_bases TGTGCGGGCTATTCTTGAGCGGATCCGGCCATCCACTCCAGTGCTCGCGCAGACGGAAATTTTCCCGCGTGCCCGCATCA GAACCGTTGGAGCGATTTGA
Downstream 100 bases:
>100_bases GACCTCCCTCGTCGGCCGAGGGAGACCTCTGCATGTCAATGCGCGGGAACAGCGAGCCCGTGAGAAGTCGAATGCCCGGC AGCGGCCACGCGTGATCGCG
Product: GTP-binding signal recognition particle
Products: NA
Alternate protein names: Flagellar Biosynthesis Protein
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKVKVIRAASMREAFAEAHRILGPDALILDSRRRGREFEITVALDPELPPDPANPWRQALSFHGIPAHIASAWADQPPDA AVAGSLSFGKLDFDRPLVIAGPPGAGKTMTTVKLATRFVLAGVRPTVINADQNRAGASAQLAALCRILRAEFIDTASKKG GMRRRPASRRPTLIDLPGMDPFDKSEMDNLRSMVEEVSGVAALVMPAGLDAADSVEIASRFHEAGATALIPTRLDVSRRL GGLVAAAGSVPLQLTEAGTSGRVSDALETVTPAFLVRRLLDAGRVQEPVANAA
Sequences:
>Translated_293_residues MKVKVIRAASMREAFAEAHRILGPDALILDSRRRGREFEITVALDPELPPDPANPWRQALSFHGIPAHIASAWADQPPDA AVAGSLSFGKLDFDRPLVIAGPPGAGKTMTTVKLATRFVLAGVRPTVINADQNRAGASAQLAALCRILRAEFIDTASKKG GMRRRPASRRPTLIDLPGMDPFDKSEMDNLRSMVEEVSGVAALVMPAGLDAADSVEIASRFHEAGATALIPTRLDVSRRL GGLVAAAGSVPLQLTEAGTSGRVSDALETVTPAFLVRRLLDAGRVQEPVANAA >Mature_293_residues MKVKVIRAASMREAFAEAHRILGPDALILDSRRRGREFEITVALDPELPPDPANPWRQALSFHGIPAHIASAWADQPPDA AVAGSLSFGKLDFDRPLVIAGPPGAGKTMTTVKLATRFVLAGVRPTVINADQNRAGASAQLAALCRILRAEFIDTASKKG GMRRRPASRRPTLIDLPGMDPFDKSEMDNLRSMVEEVSGVAALVMPAGLDAADSVEIASRFHEAGATALIPTRLDVSRRL GGLVAAAGSVPLQLTEAGTSGRVSDALETVTPAFLVRRLLDAGRVQEPVANAA
Specific function: Unknown
COG id: COG1419
COG function: function code N; Flagellar GTP-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31016; Mature: 31016
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKVIRAASMREAFAEAHRILGPDALILDSRRRGREFEITVALDPELPPDPANPWRQAL CCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHH SFHGIPAHIASAWADQPPDAAVAGSLSFGKLDFDRPLVIAGPPGAGKTMTTVKLATRFVL HCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH AGVRPTVINADQNRAGASAQLAALCRILRAEFIDTASKKGGMRRRPASRRPTLIDLPGMD HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC PFDKSEMDNLRSMVEEVSGVAALVMPAGLDAADSVEIASRFHEAGATALIPTRLDVSRRL CCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHH GGLVAAAGSVPLQLTEAGTSGRVSDALETVTPAFLVRRLLDAGRVQEPVANAA HHHHEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCHHCCCC >Mature Secondary Structure MKVKVIRAASMREAFAEAHRILGPDALILDSRRRGREFEITVALDPELPPDPANPWRQAL CCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHH SFHGIPAHIASAWADQPPDAAVAGSLSFGKLDFDRPLVIAGPPGAGKTMTTVKLATRFVL HCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH AGVRPTVINADQNRAGASAQLAALCRILRAEFIDTASKKGGMRRRPASRRPTLIDLPGMD HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC PFDKSEMDNLRSMVEEVSGVAALVMPAGLDAADSVEIASRFHEAGATALIPTRLDVSRRL CCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHH GGLVAAAGSVPLQLTEAGTSGRVSDALETVTPAFLVRRLLDAGRVQEPVANAA HHHHEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA