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The map label for this gene is paiB [H]

Identifier: 148260466

GI number: 148260466

Start: 1628671

End: 1629342

Strand: Reverse

Name: paiB [H]

Synonym: Acry_1466

Alternate gene names: 148260466

Gene position: 1629342-1628671 (Counterclockwise)

Preceding gene: 148260467

Following gene: 148260464

Centisome position: 48.07

GC content: 66.67

Gene sequence:

>672_bases
ATGTATACTCCGCCGGCTTTCGCCGAGGATGATCCCGCAATCATCGCGGCGATCATGCGCGCCTGCCGCTTGCCCGTTCT
CGTCAGTGCCGGGGAGGCAGGGCTGGAGGCGACGCATCTGCCGCTGCTCCATTTTCCCGACCCGGCACCGCACGGTACGC
TCGTCGGGCATCTCGCGCGCGCCAACCGCCAATGGCACGTGCTGCGCGATGGCGCGCCGGCCATGGCGATCTTCCAGGCG
CATGATTTTTACGTCTCGCCCGGCTGGTATGCGACCAAGCGCGAGACTGGCCGCGTCGTTCCGACCTGGAATTACGAGGC
TGTGCATCTGCAGGGCGCGGTCGAAATCATCGAGGATCCGATCCGGCTACGCGACATTGTCACTGCCTTGACCGACCGCG
AAGAGGCGCCCCAGCCCAATCCATGGCATGTGGATGACGCACCAGAAGACTTCATTGCCGCCCAGCTCAAGGGCATTGTC
GGTGTGGTGATGACGGTGCGTTCGGTCATCGCCAAGCGCAAGCTCAGCCAGAACCGCCCCCCGGCCGACCGCGCCGGCGT
CATCGCCGCGCTCGCGGCGTCAGGCCGCGCCGAGGAAGCCGCCCTCATGCACGAACGGGAGGCTGCGGCGGATCGACCTG
GCCCAGAACCCAGCCCTCGGTCGCGCGGATAA

Upstream 100 bases:

>100_bases
TTTGGCCCGTGGGATCGGCAGTGCGTTCACTAGCCGCGAGGTGCCGCAGGAAGCTGTTCGGGCAACGCTTGCGGCCTGTG
GCGCGGGCTGACCGACGCCA

Downstream 100 bases:

>100_bases
CGGGTTCATTGCCGGGCAACCCGGCTTCTGTGCCATCCGGCGCGCCGTCGATCACCCGGATCAGCCCAAGCACGCCGAGC
AGCGAGTCGAACGCGTCTTC

Product: FMN-binding negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MYTPPAFAEDDPAIIAAIMRACRLPVLVSAGEAGLEATHLPLLHFPDPAPHGTLVGHLARANRQWHVLRDGAPAMAIFQA
HDFYVSPGWYATKRETGRVVPTWNYEAVHLQGAVEIIEDPIRLRDIVTALTDREEAPQPNPWHVDDAPEDFIAAQLKGIV
GVVMTVRSVIAKRKLSQNRPPADRAGVIAALAASGRAEEAALMHEREAAADRPGPEPSPRSRG

Sequences:

>Translated_223_residues
MYTPPAFAEDDPAIIAAIMRACRLPVLVSAGEAGLEATHLPLLHFPDPAPHGTLVGHLARANRQWHVLRDGAPAMAIFQA
HDFYVSPGWYATKRETGRVVPTWNYEAVHLQGAVEIIEDPIRLRDIVTALTDREEAPQPNPWHVDDAPEDFIAAQLKGIV
GVVMTVRSVIAKRKLSQNRPPADRAGVIAALAASGRAEEAALMHEREAAADRPGPEPSPRSRG
>Mature_223_residues
MYTPPAFAEDDPAIIAAIMRACRLPVLVSAGEAGLEATHLPLLHFPDPAPHGTLVGHLARANRQWHVLRDGAPAMAIFQA
HDFYVSPGWYATKRETGRVVPTWNYEAVHLQGAVEIIEDPIRLRDIVTALTDREEAPQPNPWHVDDAPEDFIAAQLKGIV
GVVMTVRSVIAKRKLSQNRPPADRAGVIAALAASGRAEEAALMHEREAAADRPGPEPSPRSRG

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=121, Percent_Identity=33.8842975206612, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 24222; Mature: 24222

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTPPAFAEDDPAIIAAIMRACRLPVLVSAGEAGLEATHLPLLHFPDPAPHGTLVGHLAR
CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
ANRQWHVLRDGAPAMAIFQAHDFYVSPGWYATKRETGRVVPTWNYEAVHLQGAVEIIEDP
CCCCEEEEECCCCEEEEEEECCEEECCCEEECCCCCCCEEECCCCEEEEEHHHHHHHHCH
IRLRDIVTALTDREEAPQPNPWHVDDAPEDFIAAQLKGIVGVVMTVRSVIAKRKLSQNRP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PADRAGVIAALAASGRAEEAALMHEREAAADRPGPEPSPRSRG
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MYTPPAFAEDDPAIIAAIMRACRLPVLVSAGEAGLEATHLPLLHFPDPAPHGTLVGHLAR
CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
ANRQWHVLRDGAPAMAIFQAHDFYVSPGWYATKRETGRVVPTWNYEAVHLQGAVEIIEDP
CCCCEEEEECCCCEEEEEEECCEEECCCEEECCCCCCCEEECCCCEEEEEHHHHHHHHCH
IRLRDIVTALTDREEAPQPNPWHVDDAPEDFIAAQLKGIVGVVMTVRSVIAKRKLSQNRP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PADRAGVIAALAASGRAEEAALMHEREAAADRPGPEPSPRSRG
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]