| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260425
Identifier: 148260425
GI number: 148260425
Start: 1578354
End: 1579376
Strand: Reverse
Name: 148260425
Synonym: Acry_1423
Alternate gene names: NA
Gene position: 1579376-1578354 (Counterclockwise)
Preceding gene: 148260429
Following gene: 148260424
Centisome position: 46.6
GC content: 65.69
Gene sequence:
>1023_bases ATGGAGGTGGAAGTGGCCAGGGCCAATCACTGGATTTCGAATTCAATCGTGGCGCGGCGGGGCGTCGGCTGGGCCCGCAA GCCGCGTGTCCACAAGCTGACAGAGGAAATGCAGGGCCAGTATCACTACACGATCGGCCCCTATTCCGAACCCGTGCTGA CAGTCGAACCGGGCGATCGCATCGTGGTCGAGACGCGCGATGCCTTCGAGGGCGCGATCCGCACCGAGCGGGACAAGCCG AGCCGCCGCCTGCGCATGCCCTTCGTCAATCCGCAGAACGGGCCGATCATGATCGAGGGCGCGGAACCGGGCGACGCGAT CGCCGTGCATATCGAGCGGATGCGCCCGCGCGGCGAGGATCCGCACGGCACCTGCTGCATGATTCCGCAATTCGGTGCGC TCACCGGCACCGCGCTCACCGCGACGCTGAATCCGCCGCTGCCCGAAATCACCCGCAAGGTGCCGGTCAACGAGAAGGAG GTGCGCTGGAGCGCGCGCGTCGTGCTGCCCTATGCGCCGCATATCGGCACGCTCTCCACCTCGCCGGAAATCGACAGCAT CAACTCGCTGACGCCGGGATCGCATGGCGGCAACATGGACCTGCCGGACATGGGGCCGGGCAGTATCACCTACCTGCCGG TCCGCTCGCCGGGCGCGCGGCTGTTCATCGGCGATGCCCATGCCTGCCAGGGCGATGGCGAGGTGTGCGGCACGGCGGTT GAATATGCCTCGGAAACCACCATCCGCGTCGACCTGATCAAGAACTGGGCGCTCGAATGGCCGCGGCTGGAGCGCGAGGA TTTCATCATGGCGATCGGCTCCGCGCGGCCGCTGGAGGATGCGACGCGCATCGCCTATCGCGACCTCATCCTCTGGCTCG AGGCGGAATATGGATTCGGGCGGTGGGACGCCTACATGATGCTGAGCCAGTGCGGCCGGGTGCGTCTCGGCAATTTCGTC GACCCGAACTATACGGTCGGCGCCGGCATTCTGAAGAAATATATTGACGGGGAGACAGGCTGA
Upstream 100 bases:
>100_bases GGGCGCACGAGGCGGAGAACGCAATTGCGCCCGCGCGGCAAACACTGCATCATCGCTTGCGCAATCCGGCATATATGCGG GTGAGCACGTTCCGTTGGTG
Downstream 100 bases:
>100_bases CATGGATCTCGGACTGAAGGGCAAACGCGCCGTCATTACCGGCGGCACCAAGGGGATCGGCCGTTCCGTGGCCGAGCTGC TGGCGCAGGAAGGCGCCGAT
Product: acetamidase/formamidase
Products: NA
Alternate protein names: Acetamidase/Formamidase Family Protein; Formamidase; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MEVEVARANHWISNSIVARRGVGWARKPRVHKLTEEMQGQYHYTIGPYSEPVLTVEPGDRIVVETRDAFEGAIRTERDKP SRRLRMPFVNPQNGPIMIEGAEPGDAIAVHIERMRPRGEDPHGTCCMIPQFGALTGTALTATLNPPLPEITRKVPVNEKE VRWSARVVLPYAPHIGTLSTSPEIDSINSLTPGSHGGNMDLPDMGPGSITYLPVRSPGARLFIGDAHACQGDGEVCGTAV EYASETTIRVDLIKNWALEWPRLEREDFIMAIGSARPLEDATRIAYRDLILWLEAEYGFGRWDAYMMLSQCGRVRLGNFV DPNYTVGAGILKKYIDGETG
Sequences:
>Translated_340_residues MEVEVARANHWISNSIVARRGVGWARKPRVHKLTEEMQGQYHYTIGPYSEPVLTVEPGDRIVVETRDAFEGAIRTERDKP SRRLRMPFVNPQNGPIMIEGAEPGDAIAVHIERMRPRGEDPHGTCCMIPQFGALTGTALTATLNPPLPEITRKVPVNEKE VRWSARVVLPYAPHIGTLSTSPEIDSINSLTPGSHGGNMDLPDMGPGSITYLPVRSPGARLFIGDAHACQGDGEVCGTAV EYASETTIRVDLIKNWALEWPRLEREDFIMAIGSARPLEDATRIAYRDLILWLEAEYGFGRWDAYMMLSQCGRVRLGNFV DPNYTVGAGILKKYIDGETG >Mature_340_residues MEVEVARANHWISNSIVARRGVGWARKPRVHKLTEEMQGQYHYTIGPYSEPVLTVEPGDRIVVETRDAFEGAIRTERDKP SRRLRMPFVNPQNGPIMIEGAEPGDAIAVHIERMRPRGEDPHGTCCMIPQFGALTGTALTATLNPPLPEITRKVPVNEKE VRWSARVVLPYAPHIGTLSTSPEIDSINSLTPGSHGGNMDLPDMGPGSITYLPVRSPGARLFIGDAHACQGDGEVCGTAV EYASETTIRVDLIKNWALEWPRLEREDFIMAIGSARPLEDATRIAYRDLILWLEAEYGFGRWDAYMMLSQCGRVRLGNFV DPNYTVGAGILKKYIDGETG
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37676; Mature: 37676
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVEVARANHWISNSIVARRGVGWARKPRVHKLTEEMQGQYHYTIGPYSEPVLTVEPGDR CCEEEECCCCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEECCCCE IVVETRDAFEGAIRTERDKPSRRLRMPFVNPQNGPIMIEGAEPGDAIAVHIERMRPRGED EEEEECHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCC PHGTCCMIPQFGALTGTALTATLNPPLPEITRKVPVNEKEVRWSARVVLPYAPHIGTLST CCCCEEECCCCCCCCCCEEEEECCCCCHHHHHCCCCCHHHEEEEEEEEEEECCCCCCCCC SPEIDSINSLTPGSHGGNMDLPDMGPGSITYLPVRSPGARLFIGDAHACQGDGEVCGTAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHH EYASETTIRVDLIKNWALEWPRLEREDFIMAIGSARPLEDATRIAYRDLILWLEAEYGFG HHCCCCEEEEEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEEEEEEEECCCCC RWDAYMMLSQCGRVRLGNFVDPNYTVGAGILKKYIDGETG HHHHHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHCCCCC >Mature Secondary Structure MEVEVARANHWISNSIVARRGVGWARKPRVHKLTEEMQGQYHYTIGPYSEPVLTVEPGDR CCEEEECCCCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEECCCCE IVVETRDAFEGAIRTERDKPSRRLRMPFVNPQNGPIMIEGAEPGDAIAVHIERMRPRGED EEEEECHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCC PHGTCCMIPQFGALTGTALTATLNPPLPEITRKVPVNEKEVRWSARVVLPYAPHIGTLST CCCCEEECCCCCCCCCCEEEEECCCCCHHHHHCCCCCHHHEEEEEEEEEEECCCCCCCCC SPEIDSINSLTPGSHGGNMDLPDMGPGSITYLPVRSPGARLFIGDAHACQGDGEVCGTAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHH EYASETTIRVDLIKNWALEWPRLEREDFIMAIGSARPLEDATRIAYRDLILWLEAEYGFG HHCCCCEEEEEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEEEEEEEECCCCC RWDAYMMLSQCGRVRLGNFVDPNYTVGAGILKKYIDGETG HHHHHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA