| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260361
Identifier: 148260361
GI number: 148260361
Start: 1514858
End: 1515682
Strand: Reverse
Name: 148260361
Synonym: Acry_1358
Alternate gene names: NA
Gene position: 1515682-1514858 (Counterclockwise)
Preceding gene: 148260362
Following gene: 148260349
Centisome position: 44.72
GC content: 77.82
Gene sequence:
>825_bases ATGACGGGGCGCAGCCCGGCGCGGCCTGAGCGCGGGCGGATGCGCGCCCTGCTTGCCGCGCTGGCGCTGGCCTGGCTGCC GCTGGCGGCGGCGCGGGCGCGGGTGGTGCGGCTGGACACGGCGCTCGGGCCGGAGCGCGTGCTGGTGCTGCGCCCGGCGC ATCCGCGCGCGACGCTGGTGATGCTGCCGGGCGGGACCGGGCGGGTCGGGCTGACGCGGACGGGGCGGTTCCGGCATGGC GCGAATTTCCTCGTCCGCACGAGGCGGGACTGGGTGCGGCGGGGCTTCGCGGTGGTGATTCCGGACGCGCCGGGCGGGCG CGACCTGCGCGGCCACCGGCATGGGCCGGGCTTTGCCGCGGTCGTCGGCGGGCTGGTGCGGCTCGCGCGGCGGCGGATCG GGGCGCCGGTGATCCTGTTCGGCACCAGCCAGGGGACGATCGGCGCGGTGAACGGGGCGGCGCACGCGGCGGCGGGGAGC GTCGCCGGGGTGGTGCTCACGGAGACGGTGTCGGTGCCGGGAAGGCTGAGCCGGATGACGGTGTTCGACGCCGATCCCGC CGCGGTGCGGGCGCCGGTGCTGATCATCGCCAACCGGGACGACCGCTGCCCGGTCGCGCCGCCCGGACAGGCGCCGGCGG TCGCGCGGGCGCTGGGCGGCGCATCGTCGGTGACGGTGCGGATGGTCGCGGGCGGGGCGGCGGGAGACCGGCCTTGCGGC TCGCTCGGCCCGCACGGGTATTTCGGGATCGAGGGGCGGGTCGAGACGGCGATCGCCGGGTGGATCGGGACGCTGGGCCT CGAAAAAGAAAAAGGCGGCGCCTGA
Upstream 100 bases:
>100_bases CACGCGGCGGCGCTGGCCTGCTATCACTCGCCCGAATACGCGAGGGCGAAGGCGCTGCGCGAGGGGGCGTCGGTCGCCGA TGTGGTGGTGGTCGAGGGGT
Downstream 100 bases:
>100_bases GCACCGCCAAGTCAGGGAGGAAACGTCCTGGGATTTTTCTAGCACGGACGCGGGACGCGCGGATTGTTTTTGTTGCAGTG CAGCATTGCCGCGGCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTGRSPARPERGRMRALLAALALAWLPLAAARARVVRLDTALGPERVLVLRPAHPRATLVMLPGGTGRVGLTRTGRFRHG ANFLVRTRRDWVRRGFAVVIPDAPGGRDLRGHRHGPGFAAVVGGLVRLARRRIGAPVILFGTSQGTIGAVNGAAHAAAGS VAGVVLTETVSVPGRLSRMTVFDADPAAVRAPVLIIANRDDRCPVAPPGQAPAVARALGGASSVTVRMVAGGAAGDRPCG SLGPHGYFGIEGRVETAIAGWIGTLGLEKEKGGA
Sequences:
>Translated_274_residues MTGRSPARPERGRMRALLAALALAWLPLAAARARVVRLDTALGPERVLVLRPAHPRATLVMLPGGTGRVGLTRTGRFRHG ANFLVRTRRDWVRRGFAVVIPDAPGGRDLRGHRHGPGFAAVVGGLVRLARRRIGAPVILFGTSQGTIGAVNGAAHAAAGS VAGVVLTETVSVPGRLSRMTVFDADPAAVRAPVLIIANRDDRCPVAPPGQAPAVARALGGASSVTVRMVAGGAAGDRPCG SLGPHGYFGIEGRVETAIAGWIGTLGLEKEKGGA >Mature_273_residues TGRSPARPERGRMRALLAALALAWLPLAAARARVVRLDTALGPERVLVLRPAHPRATLVMLPGGTGRVGLTRTGRFRHGA NFLVRTRRDWVRRGFAVVIPDAPGGRDLRGHRHGPGFAAVVGGLVRLARRRIGAPVILFGTSQGTIGAVNGAAHAAAGSV AGVVLTETVSVPGRLSRMTVFDADPAAVRAPVLIIANRDDRCPVAPPGQAPAVARALGGASSVTVRMVAGGAAGDRPCGS LGPHGYFGIEGRVETAIAGWIGTLGLEKEKGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28217; Mature: 28086
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRSPARPERGRMRALLAALALAWLPLAAARARVVRLDTALGPERVLVLRPAHPRATLV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCCEEEE MLPGGTGRVGLTRTGRFRHGANFLVRTRRDWVRRGFAVVIPDAPGGRDLRGHRHGPGFAA EECCCCCCEEEEECCCCCCCCCCEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHH VVGGLVRLARRRIGAPVILFGTSQGTIGAVNGAAHAAAGSVAGVVLTETVSVPGRLSRMT HHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHCCCCEEEEEEEEECCCCCCEEEE VFDADPAAVRAPVLIIANRDDRCPVAPPGQAPAVARALGGASSVTVRMVAGGAAGDRPCG EECCCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCC SLGPHGYFGIEGRVETAIAGWIGTLGLEKEKGGA CCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TGRSPARPERGRMRALLAALALAWLPLAAARARVVRLDTALGPERVLVLRPAHPRATLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCCEEEE MLPGGTGRVGLTRTGRFRHGANFLVRTRRDWVRRGFAVVIPDAPGGRDLRGHRHGPGFAA EECCCCCCEEEEECCCCCCCCCCEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHH VVGGLVRLARRRIGAPVILFGTSQGTIGAVNGAAHAAAGSVAGVVLTETVSVPGRLSRMT HHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHCCCCEEEEEEEEECCCCCCEEEE VFDADPAAVRAPVLIIANRDDRCPVAPPGQAPAVARALGGASSVTVRMVAGGAAGDRPCG EECCCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCC SLGPHGYFGIEGRVETAIAGWIGTLGLEKEKGGA CCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA