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The map label for this gene is yohJ [C]

Identifier: 148260349

GI number: 148260349

Start: 1500919

End: 1501356

Strand: Reverse

Name: yohJ [C]

Synonym: Acry_1346

Alternate gene names: 148260349

Gene position: 1501356-1500919 (Counterclockwise)

Preceding gene: 148260361

Following gene: 148260348

Centisome position: 44.3

GC content: 77.85

Gene sequence:

>438_bases
ATGCGCCGGATTTCGGGATTTCGGACCAGGGGATTCGCGCCGGCGGCGCGGCTTGCGGCGGGATTCGCGGTCGTGCTCGT
CTGCCTCGCGGCGGGCGGCGCGGTGGCGCCGCTGCTGCCGGTGCGGCTGCCGGGGGCGCTGGTGGGCATGGTGATGCTGG
CAGCACTGCTCGCCGCGCATCGCGGCCGGGTGGCTGTGGCGGCGGGCGAGGCGGGGGCGCTGCTGCTGCGGCGCTACGCG
CTGTTCTTCGTGCCGGCGGGCGTGGGGGTGATGACCGGCGCCGGCGCGCTGCGGGCGGACTGGCCGGCGGTGGTGGCGGC
GCTGCTCGTCTCCTCGCTGCTGGCGCTGGCGGTGACGGGGCTGACGATGCGGCTGCTGCTCGGGTCGCGGGCTTCGGCGC
CGCGGGCGGCGTTGCCGGCGGCGGGCGGCCATGAGTGA

Upstream 100 bases:

>100_bases
CGGGCTTGTGCTGGTGGAACAAAAATGAATTGCGATTTCTGCTTCTACAGCACGGGCGGCGGCGGGCGCAAATGGAATCG
GGCGATGAGGAGTGAGGGAC

Downstream 100 bases:

>100_bases
GATGTGGAGCGGCGCGCTGCCGGGAATCGGGTTCGCCGCCGGCACGGTGCTGGCCTTCGAGGCGGCGCTGCGGCTGGCGC
GGCTTGTGCGGCATCCGGCG

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRRISGFRTRGFAPAARLAAGFAVVLVCLAAGGAVAPLLPVRLPGALVGMVMLAALLAAHRGRVAVAAGEAGALLLRRYA
LFFVPAGVGVMTGAGALRADWPAVVAALLVSSLLALAVTGLTMRLLLGSRASAPRAALPAAGGHE

Sequences:

>Translated_145_residues
MRRISGFRTRGFAPAARLAAGFAVVLVCLAAGGAVAPLLPVRLPGALVGMVMLAALLAAHRGRVAVAAGEAGALLLRRYA
LFFVPAGVGVMTGAGALRADWPAVVAALLVSSLLALAVTGLTMRLLLGSRASAPRAALPAAGGHE
>Mature_145_residues
MRRISGFRTRGFAPAARLAAGFAVVLVCLAAGGAVAPLLPVRLPGALVGMVMLAALLAAHRGRVAVAAGEAGALLLRRYA
LFFVPAGVGVMTGAGALRADWPAVVAALLVSSLLALAVTGLTMRLLLGSRASAPRAALPAAGGHE

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=110, Percent_Identity=40, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 14428; Mature: 14428

Theoretical pI: Translated: 12.63; Mature: 12.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRISGFRTRGFAPAARLAAGFAVVLVCLAAGGAVAPLLPVRLPGALVGMVMLAALLAAH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGRVAVAAGEAGALLLRRYALFFVPAGVGVMTGAGALRADWPAVVAALLVSSLLALAVTG
CCCEEEECCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
LTMRLLLGSRASAPRAALPAAGGHE
HHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRISGFRTRGFAPAARLAAGFAVVLVCLAAGGAVAPLLPVRLPGALVGMVMLAALLAAH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGRVAVAAGEAGALLLRRYALFFVPAGVGVMTGAGALRADWPAVVAALLVSSLLALAVTG
CCCEEEECCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
LTMRLLLGSRASAPRAALPAAGGHE
HHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA