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The map label for this gene is yohK [H]

Identifier: 148260348

GI number: 148260348

Start: 1500222

End: 1500926

Strand: Reverse

Name: yohK [H]

Synonym: Acry_1345

Alternate gene names: 148260348

Gene position: 1500926-1500222 (Counterclockwise)

Preceding gene: 148260349

Following gene: 148260336

Centisome position: 44.29

GC content: 77.73

Gene sequence:

>705_bases
ATGAGTGAGATGTGGAGCGGCGCGCTGCCGGGAATCGGGTTCGCCGCCGGCACGGTGCTGGCCTTCGAGGCGGCGCTGCG
GCTGGCGCGGCTTGTGCGGCATCCGGCGCTGAACCCCACTCTCGTGGCGATTCTCCTGGTGATGGCGGGGCTGGTGGCGG
GGCACGTGCCCTATGCGGCCTATGCGCGCGGGGCGGCGCCGGTTTCCTGGCTGCTCGGGCCGGCGACGGTGGCGCTGGGC
GTGCCGCTGGCGCGCAATCTCGGCGCGATCGCGCGGGACAGCCTGGCGGTTCTGGTCTCGCTCGCCGCCGGCGCGCTGAC
CGCGGCGATCGCCGGGCCGCTGGTGCTGGCGGCGTGCGGCGGCAGCGGCGCGCTGGGGCTGGCGATGGCGCCGAAGGCGG
CGACGACGCCGATCGCGATGGCGGTGGCGCGGGAGATCGGCGCCGCGCCCGCGCTCGCCGCGGTGTTCGCGATCGCCGGG
GGGGTGATCGTGGCGATCGCGGCGCGGCCGCTGCTGGGCTGGCTCGGGATCGAGGATCATCGGGCCTTCGGCCTCGCGGC
CGGGGTGGCGGGCAGCGGGATCGGCGCCGCGGAAGCGGTGGCGCGCGATGCGGAGGCGGGCGCCTACGCGGCGCTCGGCG
TCGGGCTGACGGCGGTGGCGACCGCGCTGGTCGTGCCGGCGCTGGCGGCGCTCGGGGTGGTCTGA

Upstream 100 bases:

>100_bases
TCCTCGCTGCTGGCGCTGGCGGTGACGGGGCTGACGATGCGGCTGCTGCTCGGGTCGCGGGCTTCGGCGCCGCGGGCGGC
GTTGCCGGCGGCGGGCGGCC

Downstream 100 bases:

>100_bases
CCGGCGCGGAGGGCATCGCGGGGCGGACCGGACCCCGCGGCCAGCGCCGCGGCCCGGGGCGGCGGTGGGCCGCGCCGGGC
TTGCCGGTGGCGATCTGCGG

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSEMWSGALPGIGFAAGTVLAFEAALRLARLVRHPALNPTLVAILLVMAGLVAGHVPYAAYARGAAPVSWLLGPATVALG
VPLARNLGAIARDSLAVLVSLAAGALTAAIAGPLVLAACGGSGALGLAMAPKAATTPIAMAVAREIGAAPALAAVFAIAG
GVIVAIAARPLLGWLGIEDHRAFGLAAGVAGSGIGAAEAVARDAEAGAYAALGVGLTAVATALVVPALAALGVV

Sequences:

>Translated_234_residues
MSEMWSGALPGIGFAAGTVLAFEAALRLARLVRHPALNPTLVAILLVMAGLVAGHVPYAAYARGAAPVSWLLGPATVALG
VPLARNLGAIARDSLAVLVSLAAGALTAAIAGPLVLAACGGSGALGLAMAPKAATTPIAMAVAREIGAAPALAAVFAIAG
GVIVAIAARPLLGWLGIEDHRAFGLAAGVAGSGIGAAEAVARDAEAGAYAALGVGLTAVATALVVPALAALGVV
>Mature_233_residues
SEMWSGALPGIGFAAGTVLAFEAALRLARLVRHPALNPTLVAILLVMAGLVAGHVPYAAYARGAAPVSWLLGPATVALGV
PLARNLGAIARDSLAVLVSLAAGALTAAIAGPLVLAACGGSGALGLAMAPKAATTPIAMAVAREIGAAPALAAVFAIAGG
VIVAIAARPLLGWLGIEDHRAFGLAAGVAGSGIGAAEAVARDAEAGAYAALGVGLTAVATALVVPALAALGVV

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=211, Percent_Identity=34.5971563981043, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 22377; Mature: 22246

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEMWSGALPGIGFAAGTVLAFEAALRLARLVRHPALNPTLVAILLVMAGLVAGHVPYAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
YARGAAPVSWLLGPATVALGVPLARNLGAIARDSLAVLVSLAAGALTAAIAGPLVLAACG
HHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
GSGALGLAMAPKAATTPIAMAVAREIGAAPALAAVFAIAGGVIVAIAARPLLGWLGIEDH
CCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RAFGLAAGVAGSGIGAAEAVARDAEAGAYAALGVGLTAVATALVVPALAALGVV
HHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEMWSGALPGIGFAAGTVLAFEAALRLARLVRHPALNPTLVAILLVMAGLVAGHVPYAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
YARGAAPVSWLLGPATVALGVPLARNLGAIARDSLAVLVSLAAGALTAAIAGPLVLAACG
HHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
GSGALGLAMAPKAATTPIAMAVAREIGAAPALAAVFAIAGGVIVAIAARPLLGWLGIEDH
CCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RAFGLAAGVAGSGIGAAEAVARDAEAGAYAALGVGLTAVATALVVPALAALGVV
HHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]