| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is pgl [H]
Identifier: 148260276
GI number: 148260276
Start: 1421159
End: 1421896
Strand: Reverse
Name: pgl [H]
Synonym: Acry_1273
Alternate gene names: 148260276
Gene position: 1421896-1421159 (Counterclockwise)
Preceding gene: 148260277
Following gene: 148260275
Centisome position: 41.95
GC content: 67.21
Gene sequence:
>738_bases ATGAAACCTGTGCGTGGCGAACTCGTCGTCGTGCCCGATGCGAAAGCCTTCGCCGAATACGGAGCGCGCCTCTTTGCGGA AGAGGCCGCCGCCGCGCGCGGCCGGTTCGTGGCCGGCCTCGCCGGCGGATCGACGCCGCGCGCATTGTACGAACGGCTGG CTGCTGCGCCCTGGCGCGACAGCATCGACTGGACACGCATCGATCTCGTTCTCGGCGATGAGCGGTTCGTCGCGCCGGAT GACGACAAGAGCAATGTCCGGATGATCCGCGACGCCCTGACCGCGCATCTGCCGGCGGCGCCCCGCCTGCATCAGGTGCC GTTCGACGGGATGACGGTCGATCAGGCCGCCGCGGCATATCAGCAGGATCTGGCCGAGGTCCATGGCGCAGCGACTCTCG ATCCTTCGAGGCCATTCTTTGATCTTTGCCTGCTTGGCATGGGCGATGACGGTCATACCGCGTCACTTCTGCCCGGTCAG GACGATCTGCTCGGTGAACGGCAACGCTGGGTGATTCCGGTGACCAAGGGACGCCCGGAAGCACGCGTCACGCTGACCTA CCCGATCCTCGAAAGCGCGCGGGTCGTGGTGTTTCTCGTCTCCGGCGCGGGCAAGCGCGACATGCTCGATCGCGTCCTGA GCGGTTCGGATCGTGACGTGCCCGCCGCCCGCCTCAGGCCGGTCGGACGCCTGATCTGGCTCGCGGATCGCGATGCCGCC GGACGATGGGCGGACTGA
Upstream 100 bases:
>100_bases ATGACAGTGTCAAGCGGAAGGCGGATCATGCCACACGCGGCAATGAGGAAGATGGCTTTGCCGAAGCGATGATGCGCTTC GTGCTCGAGGGGAGACGCTG
Downstream 100 bases:
>100_bases AGGGGGCACATCGCATGGGAACCGATTTCGAAAATGGCAAGCGTGCGGCCGCGCGGCTGGCCGTCGGTCTCGTCGAATCC GGAATGCGCGTGGGCCTCGG
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKPVRGELVVVPDAKAFAEYGARLFAEEAAAARGRFVAGLAGGSTPRALYERLAAAPWRDSIDWTRIDLVLGDERFVAPD DDKSNVRMIRDALTAHLPAAPRLHQVPFDGMTVDQAAAAYQQDLAEVHGAATLDPSRPFFDLCLLGMGDDGHTASLLPGQ DDLLGERQRWVIPVTKGRPEARVTLTYPILESARVVVFLVSGAGKRDMLDRVLSGSDRDVPAARLRPVGRLIWLADRDAA GRWAD
Sequences:
>Translated_245_residues MKPVRGELVVVPDAKAFAEYGARLFAEEAAAARGRFVAGLAGGSTPRALYERLAAAPWRDSIDWTRIDLVLGDERFVAPD DDKSNVRMIRDALTAHLPAAPRLHQVPFDGMTVDQAAAAYQQDLAEVHGAATLDPSRPFFDLCLLGMGDDGHTASLLPGQ DDLLGERQRWVIPVTKGRPEARVTLTYPILESARVVVFLVSGAGKRDMLDRVLSGSDRDVPAARLRPVGRLIWLADRDAA GRWAD >Mature_245_residues MKPVRGELVVVPDAKAFAEYGARLFAEEAAAARGRFVAGLAGGSTPRALYERLAAAPWRDSIDWTRIDLVLGDERFVAPD DDKSNVRMIRDALTAHLPAAPRLHQVPFDGMTVDQAAAAYQQDLAEVHGAATLDPSRPFFDLCLLGMGDDGHTASLLPGQ DDLLGERQRWVIPVTKGRPEARVTLTYPILESARVVVFLVSGAGKRDMLDRVLSGSDRDVPAARLRPVGRLIWLADRDAA GRWAD
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=248, Percent_Identity=35.0806451612903, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI52145310, Length=227, Percent_Identity=32.5991189427313, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI115533058, Length=216, Percent_Identity=30.5555555555556, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI115533060, Length=216, Percent_Identity=30.5555555555556, Blast_Score=84, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6324362, Length=213, Percent_Identity=30.9859154929577, Blast_Score=99, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6319918, Length=217, Percent_Identity=31.7972350230415, Blast_Score=98, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321957, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6321687, Length=243, Percent_Identity=27.5720164609054, Blast_Score=83, Evalue=4e-17, Organism=Drosophila melanogaster, GI24641119, Length=246, Percent_Identity=32.9268292682927, Blast_Score=101, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26675; Mature: 26675
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVRGELVVVPDAKAFAEYGARLFAEEAAAARGRFVAGLAGGSTPRALYERLAAAPWRD CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCC SIDWTRIDLVLGDERFVAPDDDKSNVRMIRDALTAHLPAAPRLHQVPFDGMTVDQAAAAY CCCEEEEEEEECCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHH QQDLAEVHGAATLDPSRPFFDLCLLGMGDDGHTASLLPGQDDLLGERQRWVIPVTKGRPE HHHHHHHCCCCCCCCCCCHHHEEEEECCCCCCEEEECCCCHHHCCCCCEEEEEECCCCCC ARVTLTYPILESARVVVFLVSGAGKRDMLDRVLSGSDRDVPAARLRPVGRLIWLADRDAA EEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCC GRWAD CCCCC >Mature Secondary Structure MKPVRGELVVVPDAKAFAEYGARLFAEEAAAARGRFVAGLAGGSTPRALYERLAAAPWRD CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCC SIDWTRIDLVLGDERFVAPDDDKSNVRMIRDALTAHLPAAPRLHQVPFDGMTVDQAAAAY CCCEEEEEEEECCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHH QQDLAEVHGAATLDPSRPFFDLCLLGMGDDGHTASLLPGQDDLLGERQRWVIPVTKGRPE HHHHHHHCCCCCCCCCCCHHHEEEEECCCCCCEEEECCCCHHHCCCCCEEEEEECCCCCC ARVTLTYPILESARVVVFLVSGAGKRDMLDRVLSGSDRDVPAARLRPVGRLIWLADRDAA EEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCC GRWAD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]