| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is fabG [H]
Identifier: 148260262
GI number: 148260262
Start: 1402443
End: 1403933
Strand: Reverse
Name: fabG [H]
Synonym: Acry_1259
Alternate gene names: 148260262
Gene position: 1403933-1402443 (Counterclockwise)
Preceding gene: 148260263
Following gene: 148260261
Centisome position: 41.42
GC content: 74.58
Gene sequence:
>1491_bases ATGATGGCTGACCGCTACCTCGCCTTCGCCAACCGGCCGGTCGGCCGCTTCCTCACCGGCCGGCTGGGGCTGCCGCAGCC CCGTCCGCTGTTGCGCCACGCCGAGGGGCAGCCCGCGGTGATCGGCCCGGTCCTCGCCGGCGCCGCCCCCGGCGGCCGTC TCGCCGAGGCCGTGGTCGCGACCCTCGCGGGCACGCCGGCCGCGATGCTGTTCGAGGGCGATGCCGCCGACTGGCCGGGT CTCGCCGCCCGCCACGGCGTCATGGCGGCGCGCTTCCTGCCGGGGCAGAGCGGGCGCGCCGGTTCGGCGGTGTTCGATGC GACCGGCATCGCCGATCCGGCCGGGCTCGACGCGCTCTACACCTTCTTCCACCACTGCGTCCGCGAGATCGCGCCGGACG GCCGCATCGTCGTCCTCGGCGCGCCGCCGGAAACCTGCGCCGACGCCGATGCAAGGGTCGCCCAGCGCGCCCTCGAAGGC TTCACCCGCTCGCTCGGCAAGGAGGCGCGGCGCAACATCGCGGTGCAGCTCGTCCGCGTCGCCGCCGATGCCGATGCCGC CGCGCTCGACAGCACGCTCCGCTTCTTCCTCTCCCGCCGCAGCGCCTATGTCTCGGGACAGGTCGTCCACGTCGCGGCGC CGGTCGTGGACCTGCCCGAAGCCGCGCCGCGCGCCCATCGGGGCCGCCGCGTTCTCGTCACCGGCGCCGCCCGCGGCATC GGTGCCGCCATCGCCGAAGCCTTCGCCCGCGAAGGGGCGAAGGTCGTCGCCCTCGACGTGCCCCAGGCCGGGGCCGACTT GCTTTCCCTCGCCCAGCGCCTCGGCGGCAGCCGCCTCGCCCTCGACATCACCGATCCCGCTTCGGATGCCGCGATCCTCG AGGACGCCGCGACCCATGGCGGCTACGACGTCGTCGTCCATAATGCCGGCATCACCCGCGACCGCACCATCGCCCGCATG AGCCGCGCCGAATGGGACCAGGTCATGCAGGTCAACCTGCTGGCCCCGCTGCGCATCACCGAAGCCCTGCTCGGCGCCGG CGCGCTCGGGCCCAACGGCCGCATCGTCGGCGTCTCCTCGATCGCCGGGATCGCCGGCAATCTCGGCCAGACCAACTATG CCGCGACCAAGGCCGGCGTGATCGGCATGGTCGATGCGCTCGCCCCGCGCCTTGCCGCGCGCGGGGCCACGATCAACGCC GTCGCCCCCGGCTTCATCGAGACCCGGATGACCGCCGCCATCCCCTTCGCCATCCGCGAGGCCGGACGGCGGATGAACGC GATGGGGGCAGGGCGGCCTGCCGGAAGATGTCGCCGAGACCATCCTCTGGCTCGCCGAGCCGCGCAGCGCCGGGGTCAAC GGCAACATCGTCCGCGTCTGCGGCCAGAGCCTGCTGGGCGCCTGAGATGGAGGCCGTCCCGATCCCGGCCGGCAACATCG CGCCCGCGCCGGACCCCGATCCCTGGCGCGCCGCGCCGCAGGAAACGCTGA
Upstream 100 bases:
>100_bases CCTACTGGGCCGAGCGCGATGGCGGCGAGGCGCCCGGCATCGCCCGGATCGGGAGGGGCGGCGCGAAGGTGCGGTCGTCG CGCGCACCGACGGCGGCCGA
Downstream 100 bases:
>100_bases AGGCCGTGCCCGCCGCCGGCGCCATCCGCCGCCGGGCCCTTGCCACGCTGCTCCGCCGCGGCGCCGCCGGCGCGCCCGAT CCCGTGGTGCTCCGCCGCCG
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MMADRYLAFANRPVGRFLTGRLGLPQPRPLLRHAEGQPAVIGPVLAGAAPGGRLAEAVVATLAGTPAAMLFEGDAADWPG LAARHGVMAARFLPGQSGRAGSAVFDATGIADPAGLDALYTFFHHCVREIAPDGRIVVLGAPPETCADADARVAQRALEG FTRSLGKEARRNIAVQLVRVAADADAAALDSTLRFFLSRRSAYVSGQVVHVAAPVVDLPEAAPRAHRGRRVLVTGAARGI GAAIAEAFAREGAKVVALDVPQAGADLLSLAQRLGGSRLALDITDPASDAAILEDAATHGGYDVVVHNAGITRDRTIARM SRAEWDQVMQVNLLAPLRITEALLGAGALGPNGRIVGVSSIAGIAGNLGQTNYAATKAGVIGMVDALAPRLAARGATINA VAPGFIETRMTAAIPFAIREAGRRMNAMGAGRPAGRCRRDHPLARRAAQRRGQRQHRPRLRPEPAGRLRWRPSRSRPATS RPRRTPIPGAPRRRKR
Sequences:
>Translated_496_residues MMADRYLAFANRPVGRFLTGRLGLPQPRPLLRHAEGQPAVIGPVLAGAAPGGRLAEAVVATLAGTPAAMLFEGDAADWPG LAARHGVMAARFLPGQSGRAGSAVFDATGIADPAGLDALYTFFHHCVREIAPDGRIVVLGAPPETCADADARVAQRALEG FTRSLGKEARRNIAVQLVRVAADADAAALDSTLRFFLSRRSAYVSGQVVHVAAPVVDLPEAAPRAHRGRRVLVTGAARGI GAAIAEAFAREGAKVVALDVPQAGADLLSLAQRLGGSRLALDITDPASDAAILEDAATHGGYDVVVHNAGITRDRTIARM SRAEWDQVMQVNLLAPLRITEALLGAGALGPNGRIVGVSSIAGIAGNLGQTNYAATKAGVIGMVDALAPRLAARGATINA VAPGFIETRMTAAIPFAIREAGRRMNAMGAGRPAGRCRRDHPLARRAAQRRGQRQHRPRLRPEPAGRLRWRPSRSRPATS RPRRTPIPGAPRRRKR >Mature_496_residues MMADRYLAFANRPVGRFLTGRLGLPQPRPLLRHAEGQPAVIGPVLAGAAPGGRLAEAVVATLAGTPAAMLFEGDAADWPG LAARHGVMAARFLPGQSGRAGSAVFDATGIADPAGLDALYTFFHHCVREIAPDGRIVVLGAPPETCADADARVAQRALEG FTRSLGKEARRNIAVQLVRVAADADAAALDSTLRFFLSRRSAYVSGQVVHVAAPVVDLPEAAPRAHRGRRVLVTGAARGI GAAIAEAFAREGAKVVALDVPQAGADLLSLAQRLGGSRLALDITDPASDAAILEDAATHGGYDVVVHNAGITRDRTIARM SRAEWDQVMQVNLLAPLRITEALLGAGALGPNGRIVGVSSIAGIAGNLGQTNYAATKAGVIGMVDALAPRLAARGATINA VAPGFIETRMTAAIPFAIREAGRRMNAMGAGRPAGRCRRDHPLARRAAQRRGQRQHRPRLRPEPAGRLRWRPSRSRPATS RPRRTPIPGAPRRRKR
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=215, Percent_Identity=38.6046511627907, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI4504505, Length=203, Percent_Identity=35.4679802955665, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI40254992, Length=182, Percent_Identity=34.6153846153846, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI31542939, Length=202, Percent_Identity=32.1782178217822, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI4758504, Length=212, Percent_Identity=29.7169811320755, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI32483357, Length=189, Percent_Identity=31.2169312169312, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI20149619, Length=222, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI66933014, Length=182, Percent_Identity=32.4175824175824, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI142976729, Length=230, Percent_Identity=24.7826086956522, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI83715985, Length=192, Percent_Identity=30.2083333333333, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI40807363, Length=191, Percent_Identity=27.2251308900524, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI7705925, Length=210, Percent_Identity=30.4761904761905, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI224922801, Length=179, Percent_Identity=30.7262569832402, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1787335, Length=191, Percent_Identity=46.0732984293194, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI87082100, Length=194, Percent_Identity=35.5670103092784, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1790717, Length=191, Percent_Identity=28.7958115183246, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1789208, Length=189, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI87082160, Length=190, Percent_Identity=25.7894736842105, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI2367365, Length=190, Percent_Identity=33.1578947368421, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI2367175, Length=193, Percent_Identity=32.6424870466321, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786812, Length=223, Percent_Identity=28.2511210762332, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786701, Length=195, Percent_Identity=29.7435897435897, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1789378, Length=241, Percent_Identity=27.8008298755187, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25147288, Length=192, Percent_Identity=42.1875, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17555706, Length=202, Percent_Identity=40.0990099009901, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17538182, Length=213, Percent_Identity=30.5164319248826, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17564282, Length=212, Percent_Identity=30.188679245283, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17568967, Length=200, Percent_Identity=32, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17508895, Length=194, Percent_Identity=28.3505154639175, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115534694, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203115, Length=196, Percent_Identity=30.6122448979592, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193203117, Length=211, Percent_Identity=27.9620853080569, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17561402, Length=203, Percent_Identity=31.5270935960591, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=211, Percent_Identity=32.2274881516588, Blast_Score=93, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6322227, Length=197, Percent_Identity=27.9187817258883, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24639444, Length=200, Percent_Identity=36.5, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI18859837, Length=199, Percent_Identity=34.6733668341709, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI23397609, Length=211, Percent_Identity=34.5971563981043, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24644339, Length=195, Percent_Identity=35.8974358974359, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI17737361, Length=205, Percent_Identity=31.219512195122, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI21357041, Length=191, Percent_Identity=30.8900523560209, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI21358495, Length=254, Percent_Identity=26.3779527559055, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28571526, Length=191, Percent_Identity=31.413612565445, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24643142, Length=186, Percent_Identity=32.258064516129, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355319, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581726, Length=198, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 52102; Mature: 52102
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMADRYLAFANRPVGRFLTGRLGLPQPRPLLRHAEGQPAVIGPVLAGAAPGGRLAEAVVA CCCCHHHHHHCCCHHHHHHCCCCCCCCCHHHHCCCCCCCEEHHHHHCCCCCHHHHHHHHH TLAGTPAAMLFEGDAADWPGLAARHGVMAARFLPGQSGRAGSAVFDATGIADPAGLDALY HHCCCCEEEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEECCCCCCCCHHHHHH TFFHHCVREIAPDGRIVVLGAPPETCADADARVAQRALEGFTRSLGKEARRNIAVQLVRV HHHHHHHHHHCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADADAAALDSTLRFFLSRRSAYVSGQVVHVAAPVVDLPEAAPRAHRGRRVLVTGAARGI HCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCEEEEECCCHHH GAAIAEAFAREGAKVVALDVPQAGADLLSLAQRLGGSRLALDITDPASDAAILEDAATHG HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCC GYDVVVHNAGITRDRTIARMSRAEWDQVMQVNLLAPLRITEALLGAGALGPNGRIVGVSS CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEHH IAGIAGNLGQTNYAATKAGVIGMVDALAPRLAARGATINAVAPGFIETRMTAAIPFAIRE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHH AGRRMNAMGAGRPAGRCRRDHPLARRAAQRRGQRQHRPRLRPEPAGRLRWRPSRSRPATS HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCC RPRRTPIPGAPRRRKR CCCCCCCCCCCCCCCC >Mature Secondary Structure MMADRYLAFANRPVGRFLTGRLGLPQPRPLLRHAEGQPAVIGPVLAGAAPGGRLAEAVVA CCCCHHHHHHCCCHHHHHHCCCCCCCCCHHHHCCCCCCCEEHHHHHCCCCCHHHHHHHHH TLAGTPAAMLFEGDAADWPGLAARHGVMAARFLPGQSGRAGSAVFDATGIADPAGLDALY HHCCCCEEEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEECCCCCCCCHHHHHH TFFHHCVREIAPDGRIVVLGAPPETCADADARVAQRALEGFTRSLGKEARRNIAVQLVRV HHHHHHHHHHCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADADAAALDSTLRFFLSRRSAYVSGQVVHVAAPVVDLPEAAPRAHRGRRVLVTGAARGI HCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCEEEEECCCHHH GAAIAEAFAREGAKVVALDVPQAGADLLSLAQRLGGSRLALDITDPASDAAILEDAATHG HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCC GYDVVVHNAGITRDRTIARMSRAEWDQVMQVNLLAPLRITEALLGAGALGPNGRIVGVSS CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEHH IAGIAGNLGQTNYAATKAGVIGMVDALAPRLAARGATINAVAPGFIETRMTAAIPFAIRE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHH AGRRMNAMGAGRPAGRCRRDHPLARRAAQRRGQRQHRPRLRPEPAGRLRWRPSRSRPATS HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCC RPRRTPIPGAPRRRKR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]