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The map label for this gene is recO

Identifier: 148260213

GI number: 148260213

Start: 1346725

End: 1347480

Strand: Reverse

Name: recO

Synonym: Acry_1209

Alternate gene names: 148260213

Gene position: 1347480-1346725 (Counterclockwise)

Preceding gene: 148260214

Following gene: 148260212

Centisome position: 39.76

GC content: 73.28

Gene sequence:

>756_bases
ATGGAATGGAGCGAACCCGCGATCGTCCTCAGCGTTGCCGCGTTCGGCGAGAGCGATCTGCGGACCATCGTCCTGGCCGA
GACGCATGGCGCCTGGCACGGGCTGGCGCGCGGCGGGGCGGGGCGGCGCGGGGCGCCGATCTGGCAGGAAGGCAATCTGA
TCAACGCCCGCTGGGTCGCGCGCCTGCCGGAACAGCTCGGCAGCATCAGCGGGGAGCTGGTGCATCCCGCCGCCGCGATC
GCGATGGCGGACCCGCTGGCGCTGGCGGTGCTGCGCGCGGCCTGTGCCGTCGCGGCGGGTGCGCTGCCGGAGCGCGAGGC
GCATCGCGGCGCGTTCATCCGGCTTGCGCGGCTACTGGGCGGCATCGGCATCGCCGGCACTGCGCTGCCGGCGCTGGTGC
GCTTCGAACTCGAATTGCTGCGCGAGCTCGGCTACGGGCTCGATCTGTCGTCCTGCGCGCTGTCCGGGGCGGCCGAGGAT
CTCGCCTTCGTTTCGCCGCGCACCGGCCGCGCGGTGGCGCGCGGCGCAGCCGGCGATTGGGTGCCGCGGCTGCTGAAGCT
GCCGGCCTTCCTGCTCGACGAGGATGCCGCGGACGATAAGGCCGACCTTGCTGCCTGCCGCGACGGGCTGGCGCTGACCG
GCCATTTCCTCGCCCGCGATGCGTTCGGCGCGCGCCATGCCCCGCTTCCCACGGCCCGGCTCGACCTCTATGACCGGCTG
ACCCGCAGACTGAACGGAGACGACGATGCCCGATGA

Upstream 100 bases:

>100_bases
CGAGGTCGACATCTCGTTCGAGGTCGCGGCGCGCGATGGAACCGGGGAAGGCGGCTGGCTCGAAATTCGCGACCCGGCTT
TTCTCTGAGCAGGGCTGCGC

Downstream 100 bases:

>100_bases
TCTCCTGGGCAATGTTCAGGACACGAAACTCGCCACCGCCCTTTCCGAGCGGTACCTTGCCTATGCGCTGTCGACCATCA
TGGCGCGGTCGCTGCCGGAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVARLPEQLGSISGELVHPAAAI
AMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLGGIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAED
LAFVSPRTGRAVARGAAGDWVPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRL
TRRLNGDDDAR

Sequences:

>Translated_251_residues
MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVARLPEQLGSISGELVHPAAAI
AMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLGGIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAED
LAFVSPRTGRAVARGAAGDWVPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRL
TRRLNGDDDAR
>Mature_251_residues
MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVARLPEQLGSISGELVHPAAAI
AMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLGGIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAED
LAFVSPRTGRAVARGAAGDWVPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRL
TRRLNGDDDAR

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_ACICJ (A5FXT9)

Other databases:

- EMBL:   CP000697
- RefSeq:   YP_001234340.1
- ProteinModelPortal:   A5FXT9
- STRING:   A5FXT9
- GeneID:   5159649
- GenomeReviews:   CP000697_GR
- KEGG:   acr:Acry_1209
- eggNOG:   COG1381
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   CLSK958069
- BioCyc:   ACRY349163:ACRY_1209-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26441; Mature: 26441

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA
CCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEECHHHHH
RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCHH
VPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRL
HHHHHHCHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TRRLNGDDDAR
HHHCCCCCCCC
>Mature Secondary Structure
MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA
CCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEECHHHHH
RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCHH
VPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRL
HHHHHHCHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TRRLNGDDDAR
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA