| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yxlA [H]
Identifier: 148260153
GI number: 148260153
Start: 1280041
End: 1281429
Strand: Reverse
Name: yxlA [H]
Synonym: Acry_1149
Alternate gene names: 148260153
Gene position: 1281429-1280041 (Counterclockwise)
Preceding gene: 148260154
Following gene: 148260152
Centisome position: 37.81
GC content: 63.21
Gene sequence:
>1389_bases ATGACAAACCAGGCCCAGAAAGCGGGCGATACGAAATCGGGCTTCTCGGTCGAATCCAAGGGCATCGCCCAGGTCACTCC GGAGGAAGCCTATGGCAAGCCCTCGCATCTCTTCGGACTCTGGATGGCGGTGAACGTCGAATTCGCCACCATCACCACCG GGGCGATCGCAACCGGCGTATTCGGCCTCTCGGTGCCCGACGCGGTCGTGGCGATCGTCGGCGCCAACATTCTGGGTTGC CTGCTGCTCGGCCTCTTCTCGACCTATGGCGTCGATTACGGCCTGCCGATGATGATCCTGTGCGAACGCTGGTTCGGGCG GTTCGGCAACCGGGTCCTTTCGTTCCTCAACTTTCTCAACGGCTTTTCATGGTTCGCGATCAACACCGTGATCGGCGCCT ATTTCGTCCATCGCGTGCTCGGCGCCAGCCTGGTCGTCGGCATCGTCGGCCTCACGATCATCCAGGTGCTGATCGCGATC GTCGGGCATGACTTCATCATCAAGGCGGAAAAGGTCTTCTTCTGGTTCCTTGGCGCCGTCTTCGCGATCCTGACGGCGCT GACCCTCGCCCATATCCCGCATCTGCCGGTCGCCGATCCGAAGAAGCTCGCGGAAGTGGGAGGTCGTTCCGGCGCGATCC TGCTCACCGTCTCGATCATGCTCTCCTGGCTGGGCGGCTGGATCCTGTATTCGGGCGACTATTCGCGCTACATGTGCTAC CGGCACAACCGCGAGGCGATCAAGCGCGGCGTCTTCTGGAACGCCTTCCTCGGCTGCTTCATCTCGTCGACCTGGCTCGA GGTGGTCGGAGCGGTCATCGGCGGCACCGTCGCGCTGAACAGCCCGGCCGACCTGTTCTCGTCCTGGCTGCCCGGCTGGT TCCGCGTTCCGCTGATCGTCGCCATCGTCATCGGCACGATCAGCCCGAACGTGCTGAACATATATTCCGCCAGCCTCTCC GCCCTGGCTTCGGGAATCCGCATGAAGCAATGGCAGGCGGCCCTGCTGACGGGCGGCGTCGGACTGATCATCTCGCTGCT CGCCTACCAGCATTTCTACAAGAACTACGAACTCCTGCTCTTCTTCCTCGGCTACGTGATCTTCCCGCGCTTCCCGGTGA TGGCGATCGGCCATCTCCGCCCGCGCGTCTCGCGCTTCGCGTCGATCGACGTGACGACGGTCGGCTTCCTCTCCTGGCTC GCCGGTGTCGTCTGCAGCGTGCCGTTCTGGAACCAGTATCCGGTCTTCGTCGGCGCCTTCGCGGCCGTTCATCCGGAATT CGGCGACATTTCCTTCTTCATCGGCGCGTTCGTCGCCGCGATCGTCTATCTCCTCGCCACCATCCCGCGCACGGCGCCGA TCCCGGCGGGTGCTGTGCCCAGCGCGTAA
Upstream 100 bases:
>100_bases CTTCCGCCTCGCCCGTCGCGTCGCCGCGCCGGCCGACTCCGCGACCGCCTTTTCAGAGTAATAGAAACCGGACCCAAACC GGAACCCACAGGAGGACGTC
Downstream 100 bases:
>100_bases GGACGCCGCATGATGATCCCGCCCAGCCCCGGCCGTCTCGCCATCCGCGCTCAGTTGCTCGGCTACGACGGCAATCCCTT CGTGTCGGATCCCGCGGACT
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTNQAQKAGDTKSGFSVESKGIAQVTPEEAYGKPSHLFGLWMAVNVEFATITTGAIATGVFGLSVPDAVVAIVGANILGC LLLGLFSTYGVDYGLPMMILCERWFGRFGNRVLSFLNFLNGFSWFAINTVIGAYFVHRVLGASLVVGIVGLTIIQVLIAI VGHDFIIKAEKVFFWFLGAVFAILTALTLAHIPHLPVADPKKLAEVGGRSGAILLTVSIMLSWLGGWILYSGDYSRYMCY RHNREAIKRGVFWNAFLGCFISSTWLEVVGAVIGGTVALNSPADLFSSWLPGWFRVPLIVAIVIGTISPNVLNIYSASLS ALASGIRMKQWQAALLTGGVGLIISLLAYQHFYKNYELLLFFLGYVIFPRFPVMAIGHLRPRVSRFASIDVTTVGFLSWL AGVVCSVPFWNQYPVFVGAFAAVHPEFGDISFFIGAFVAAIVYLLATIPRTAPIPAGAVPSA
Sequences:
>Translated_462_residues MTNQAQKAGDTKSGFSVESKGIAQVTPEEAYGKPSHLFGLWMAVNVEFATITTGAIATGVFGLSVPDAVVAIVGANILGC LLLGLFSTYGVDYGLPMMILCERWFGRFGNRVLSFLNFLNGFSWFAINTVIGAYFVHRVLGASLVVGIVGLTIIQVLIAI VGHDFIIKAEKVFFWFLGAVFAILTALTLAHIPHLPVADPKKLAEVGGRSGAILLTVSIMLSWLGGWILYSGDYSRYMCY RHNREAIKRGVFWNAFLGCFISSTWLEVVGAVIGGTVALNSPADLFSSWLPGWFRVPLIVAIVIGTISPNVLNIYSASLS ALASGIRMKQWQAALLTGGVGLIISLLAYQHFYKNYELLLFFLGYVIFPRFPVMAIGHLRPRVSRFASIDVTTVGFLSWL AGVVCSVPFWNQYPVFVGAFAAVHPEFGDISFFIGAFVAAIVYLLATIPRTAPIPAGAVPSA >Mature_461_residues TNQAQKAGDTKSGFSVESKGIAQVTPEEAYGKPSHLFGLWMAVNVEFATITTGAIATGVFGLSVPDAVVAIVGANILGCL LLGLFSTYGVDYGLPMMILCERWFGRFGNRVLSFLNFLNGFSWFAINTVIGAYFVHRVLGASLVVGIVGLTIIQVLIAIV GHDFIIKAEKVFFWFLGAVFAILTALTLAHIPHLPVADPKKLAEVGGRSGAILLTVSIMLSWLGGWILYSGDYSRYMCYR HNREAIKRGVFWNAFLGCFISSTWLEVVGAVIGGTVALNSPADLFSSWLPGWFRVPLIVAIVIGTISPNVLNIYSASLSA LASGIRMKQWQAALLTGGVGLIISLLAYQHFYKNYELLLFFLGYVIFPRFPVMAIGHLRPRVSRFASIDVTTVGFLSWLA GVVCSVPFWNQYPVFVGAFAAVHPEFGDISFFIGAFVAAIVYLLATIPRTAPIPAGAVPSA
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320897, Length=336, Percent_Identity=28.2738095238095, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320902, Length=338, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6320903, Length=336, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 49941; Mature: 49810
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQAQKAGDTKSGFSVESKGIAQVTPEEAYGKPSHLFGLWMAVNVEFATITTGAIATGV CCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHEEEEEEEEEHHHHHHHH FGLSVPDAVVAIVGANILGCLLLGLFSTYGVDYGLPMMILCERWFGRFGNRVLSFLNFLN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GFSWFAINTVIGAYFVHRVLGASLVVGIVGLTIIQVLIAIVGHDFIIKAEKVFFWFLGAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHH FAILTALTLAHIPHLPVADPKKLAEVGGRSGAILLTVSIMLSWLGGWILYSGDYSRYMCY HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHH RHNREAIKRGVFWNAFLGCFISSTWLEVVGAVIGGTVALNSPADLFSSWLPGWFRVPLIV HCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHH AIVIGTISPNVLNIYSASLSALASGIRMKQWQAALLTGGVGLIISLLAYQHFYKNYELLL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHH FFLGYVIFPRFPVMAIGHLRPRVSRFASIDVTTVGFLSWLAGVVCSVPFWNQYPVFVGAF HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AAVHPEFGDISFFIGAFVAAIVYLLATIPRTAPIPAGAVPSA HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TNQAQKAGDTKSGFSVESKGIAQVTPEEAYGKPSHLFGLWMAVNVEFATITTGAIATGV CCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHEEEEEEEEEHHHHHHHH FGLSVPDAVVAIVGANILGCLLLGLFSTYGVDYGLPMMILCERWFGRFGNRVLSFLNFLN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GFSWFAINTVIGAYFVHRVLGASLVVGIVGLTIIQVLIAIVGHDFIIKAEKVFFWFLGAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHH FAILTALTLAHIPHLPVADPKKLAEVGGRSGAILLTVSIMLSWLGGWILYSGDYSRYMCY HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHH RHNREAIKRGVFWNAFLGCFISSTWLEVVGAVIGGTVALNSPADLFSSWLPGWFRVPLIV HCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHH AIVIGTISPNVLNIYSASLSALASGIRMKQWQAALLTGGVGLIISLLAYQHFYKNYELLL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHH FFLGYVIFPRFPVMAIGHLRPRVSRFASIDVTTVGFLSWLAGVVCSVPFWNQYPVFVGAF HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AAVHPEFGDISFFIGAFVAAIVYLLATIPRTAPIPAGAVPSA HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]