| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260091
Identifier: 148260091
GI number: 148260091
Start: 1208098
End: 1208664
Strand: Reverse
Name: 148260091
Synonym: Acry_1084
Alternate gene names: NA
Gene position: 1208664-1208098 (Counterclockwise)
Preceding gene: 148260093
Following gene: 148260090
Centisome position: 35.66
GC content: 71.43
Gene sequence:
>567_bases ATGCCGGATTGCGAATATTTGTGCCGTCAGCGGACGCTTCCTCATCGTGAGGCGGCGGAACAGTCAAGGCGCCCGAACAT GCGTGCACGGCCCCGAAGCGGGTGGCGTATCATTGCCGGACTTCTTCTCGCCGCGCCGTTAGCGGCACCCGGCCTCGCCG CGGCGCAGACCACGACCCCGCATCGCGGCGCGCCCTCCGGCGATGTCTATCCCCGCGCCGCCGCCTGGTGCTCGAATTTC CGCCTCGGCGCGCTCTCCGCGAAAACCCGGATGGACGCCGCCAACCTCCAGCGCCTGCGCGCCGCGCAGGAGGAACTCGC CCCCGGCTTCACCGCCGGCGGCGCGCGCACCGGTCTCGATCTTCTCGCCGGCTATCAGGAGCAGCTCGAACGGCGCCATC CCGATATCGGCCTGGCGTCGACCTATCTCGCGATGGTCAGCACCGTGCCGGTCACCACCGACGCGCTCCGCCGCGTCAAC GCGCTGCTCTGCGTCAGCACGACGCGCGCGACCGCCGCACAGATCGCCGCCACCGCCGAGGCCGCGCGCCTCGACCTCGC GCGCTAG
Upstream 100 bases:
>100_bases CTCATGGTCAGGACCGTAGTCGCTTCGCCGGCCACTCCGACCTGACAAAACGGATTACACCGAAAGACGCAGCGGGGACT TGATCTGGATCAGCGCACGC
Downstream 100 bases:
>100_bases CCGGATGACGCCAATGGAGCCGGACATGATCAAGCGCCCCCCGAACACAAACGATACGTTTGATACGGTCACGCGACGCC GGATCGTCCTCGGCGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPDCEYLCRQRTLPHREAAEQSRRPNMRARPRSGWRIIAGLLLAAPLAAPGLAAAQTTTPHRGAPSGDVYPRAAAWCSNF RLGALSAKTRMDAANLQRLRAAQEELAPGFTAGGARTGLDLLAGYQEQLERRHPDIGLASTYLAMVSTVPVTTDALRRVN ALLCVSTTRATAAQIAATAEAARLDLAR
Sequences:
>Translated_188_residues MPDCEYLCRQRTLPHREAAEQSRRPNMRARPRSGWRIIAGLLLAAPLAAPGLAAAQTTTPHRGAPSGDVYPRAAAWCSNF RLGALSAKTRMDAANLQRLRAAQEELAPGFTAGGARTGLDLLAGYQEQLERRHPDIGLASTYLAMVSTVPVTTDALRRVN ALLCVSTTRATAAQIAATAEAARLDLAR >Mature_187_residues PDCEYLCRQRTLPHREAAEQSRRPNMRARPRSGWRIIAGLLLAAPLAAPGLAAAQTTTPHRGAPSGDVYPRAAAWCSNFR LGALSAKTRMDAANLQRLRAAQEELAPGFTAGGARTGLDLLAGYQEQLERRHPDIGLASTYLAMVSTVPVTTDALRRVNA LLCVSTTRATAAQIAATAEAARLDLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20141; Mature: 20010
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDCEYLCRQRTLPHREAAEQSRRPNMRARPRSGWRIIAGLLLAAPLAAPGLAAAQTTTP CCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCC HRGAPSGDVYPRAAAWCSNFRLGALSAKTRMDAANLQRLRAAQEELAPGFTAGGARTGLD CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LLAGYQEQLERRHPDIGLASTYLAMVSTVPVTTDALRRVNALLCVSTTRATAAQIAATAE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AARLDLAR HHHHCCCC >Mature Secondary Structure PDCEYLCRQRTLPHREAAEQSRRPNMRARPRSGWRIIAGLLLAAPLAAPGLAAAQTTTP CCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCC HRGAPSGDVYPRAAAWCSNFRLGALSAKTRMDAANLQRLRAAQEELAPGFTAGGARTGLD CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LLAGYQEQLERRHPDIGLASTYLAMVSTVPVTTDALRRVNALLCVSTTRATAAQIAATAE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AARLDLAR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA