| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259985
Identifier: 148259985
GI number: 148259985
Start: 1079578
End: 1080210
Strand: Reverse
Name: 148259985
Synonym: Acry_0975
Alternate gene names: NA
Gene position: 1080210-1079578 (Counterclockwise)
Preceding gene: 148259986
Following gene: 148259983
Centisome position: 31.87
GC content: 72.99
Gene sequence:
>633_bases GTGATCCGCCTCGCCCGGCCGGCGCTGCTGGCGGGAGGGCTGCTGGGCGCGGCGCTGGTGCTGCACCTGCATCCGTTCGG CGCGCTGTTCGCGCCGCATCCCGGCCACGGCTGGCGTGACGCGCTGGCACTCGGCGCGCTGGGGGCGCTGGCCTGCGCGG TCGGGATGCCGAGGCAGGTGATCGGCTTTGCGGCGGGCTTCGCCTGGGGCGTGATTCCGGGCACGGCGCTGGCGCTTGCA TCCCAGCTGGCCGGCTGCGCCGCCGATCTGCTCTGGGCGCGGCTGGTCGGCCGAGCCTTCGTGCGTTCCCGGCTCGGCCA TCGGGCGGCCCGGATCGACCGCGCTCTCGCGGCGCGCCCGTTCACCGCCACGCTCACGCTGCGCCTGATGCCGCTGGGCA GCAATCTCGCGCTGAACCTGCTCGCCGGCGTCTCCAGCGTGAAGGTATTTCCGTTCCTCGCCGGATCGGCGCTGGGCTTC GTGCCGCAGACCGTGATCTTCGCCCTGATCGGCGCGGGCGGACGTGTGGGGCGGGATGTTGAACTTGCCGTGGGTGTCGT GCTGTTCGTGATCTCGATCGTGCTGGCATTCGGGCTGCGCCGCCGGATTGCGCCGGAACTCGCCGGCGTCTGA
Upstream 100 bases:
>100_bases ACCTCGCGGGCGTGGCCTGGTTGCAGCGGCGGGCCTGCCGGCCGGTTCTGGGCGCCGGCGGAGCCGATGCCGGGTCGCCG GCCTCGCTGGAGGTGGCTCG
Downstream 100 bases:
>100_bases CTCGGATCAGCGGCAGATGGCGCCCGACGAACAGGCGATGCGCGCGGCGGGCGGCGGGCTGATCCGGCGGATGACGATTT CGGAGCCGGCGCGCCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: SNARE Associated Golgi Protein-Like Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIRLARPALLAGGLLGAALVLHLHPFGALFAPHPGHGWRDALALGALGALACAVGMPRQVIGFAAGFAWGVIPGTALALA SQLAGCAADLLWARLVGRAFVRSRLGHRAARIDRALAARPFTATLTLRLMPLGSNLALNLLAGVSSVKVFPFLAGSALGF VPQTVIFALIGAGGRVGRDVELAVGVVLFVISIVLAFGLRRRIAPELAGV
Sequences:
>Translated_210_residues MIRLARPALLAGGLLGAALVLHLHPFGALFAPHPGHGWRDALALGALGALACAVGMPRQVIGFAAGFAWGVIPGTALALA SQLAGCAADLLWARLVGRAFVRSRLGHRAARIDRALAARPFTATLTLRLMPLGSNLALNLLAGVSSVKVFPFLAGSALGF VPQTVIFALIGAGGRVGRDVELAVGVVLFVISIVLAFGLRRRIAPELAGV >Mature_210_residues MIRLARPALLAGGLLGAALVLHLHPFGALFAPHPGHGWRDALALGALGALACAVGMPRQVIGFAAGFAWGVIPGTALALA SQLAGCAADLLWARLVGRAFVRSRLGHRAARIDRALAARPFTATLTLRLMPLGSNLALNLLAGVSSVKVFPFLAGSALGF VPQTVIFALIGAGGRVGRDVELAVGVVLFVISIVLAFGLRRRIAPELAGV
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21555; Mature: 21555
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLARPALLAGGLLGAALVLHLHPFGALFAPHPGHGWRDALALGALGALACAVGMPRQV CCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH IGFAAGFAWGVIPGTALALASQLAGCAADLLWARLVGRAFVRSRLGHRAARIDRALAARP HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FTATLTLRLMPLGSNLALNLLAGVSSVKVFPFLAGSALGFVPQTVIFALIGAGGRVGRDV CEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH ELAVGVVLFVISIVLAFGLRRRIAPELAGV HHHHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure MIRLARPALLAGGLLGAALVLHLHPFGALFAPHPGHGWRDALALGALGALACAVGMPRQV CCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH IGFAAGFAWGVIPGTALALASQLAGCAADLLWARLVGRAFVRSRLGHRAARIDRALAARP HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FTATLTLRLMPLGSNLALNLLAGVSSVKVFPFLAGSALGFVPQTVIFALIGAGGRVGRDV CEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH ELAVGVVLFVISIVLAFGLRRRIAPELAGV HHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA