| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259899
Identifier: 148259899
GI number: 148259899
Start: 979155
End: 980207
Strand: Reverse
Name: 148259899
Synonym: Acry_0888
Alternate gene names: NA
Gene position: 980207-979155 (Counterclockwise)
Preceding gene: 148259900
Following gene: 148259898
Centisome position: 28.92
GC content: 75.02
Gene sequence:
>1053_bases GTGACACGAAACCTTAATTTTCAATTTTTCTTGAGTCGCGTAACCAGAACATCAATGGATTTCCTTCATTGGTATATCGC AAGCCTGCGGTCGCTGGTGCCTGGCGCGCTGCGGCGTCCGGCCGGGCAGGATGCGGCGATGACCGTCACCGCCGCCGCCG GCGCGCCCCCGGAAGCCGCCGAGATCACGCAGGAAGGGCGCGGCGGCGCCCGCGCGCTCGGCCGGCTGGGGCAGATGCGG CGGAGCGCGGTCATCCGGCCGGTGGTGTTGCGGCTGCGCGGCGCCGGCGCGCTGATCCGCCGCGTCACCCTCCCCGCCGC CGCGCGGCGCGACCTCGCGGCCGCACTCGCCTTCGAGATCGACCGCCTGACCCCCTTCACCGCCGACGAGGTGCTGGTCA CCCACGAGATCCTCGCGCGCGACAACGCGCAGGGCCTGCTCCATGTCCGGCTCGCCGTGCTGCCCCGTGCCTGGATCGCC GGCCTCCTCGCCGCACTGGGCGAGGCCGGGCTCGCCGCCGTGCGGATCGAGGCCGCCAGCGCCGAGGACGAGGCCGTCTT CGCGCTGCCTGGCGCCCGGCGGCAAAGCCGCGTCCCCCCGGCGCTCGCCCTGCTCGCCGCCGGCCTCGCCGCGCTGTGCC TCGCCATTCCGCCGGCGCGCCAGGCGCTCGCCCTGCACCGGCTCGATGCCGCGCGCGCCGCGCTCGCCCCGCGGCTCCGC CTTGCCGAGGCTCTGCGCGCCCGCCTCGCCGCCGAAGACCGCTTCCGCGCCGCGCTCGGCGCCGAGGCAGCGCGCGAGGG CGACACGCTGCTGATGCTCGCCGCCCTCACCCGCGCCCTGCCGGACCGCAGCTACCTTACCGATCTCTCCCTGCGCGACC GGGTGGCGACGCTCGACGGCGAATCCCCCAACGCCGCCGGCCTCGTCGCCCGGCTCGCCGCCGATCCGCATTTCGCCGAT CCGGCCTTCGCCGCCCCGGTCACGCGGTCGCTCAACGGCGGCGGCGATGTGTTCTCGATCCGGGTGCGGCTGCGCGACGA TGAAGCGGGCTGA
Upstream 100 bases:
>100_bases CCAGACCTGATCGCCGCCCCCTGGCGCGCCCCCTTCGCCGCCGGCGGATAGGCGCGCGGCCGCGCGCCGCGGCGGCACGC GCCGGCAGCGCCAGGATCGA
Downstream 100 bases:
>100_bases CGCGATGGCACAGCTCCCGCGCGACCTGCCGGACGGCCGCGCCGGCCAGGCGCTCGCGCTCGCGATCTCGGCGGCGCTGC TCGCCCTTGTCGGCTTCGGC
Product: fimbrial assembly family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTRNLNFQFFLSRVTRTSMDFLHWYIASLRSLVPGALRRPAGQDAAMTVTAAAGAPPEAAEITQEGRGGARALGRLGQMR RSAVIRPVVLRLRGAGALIRRVTLPAAARRDLAAALAFEIDRLTPFTADEVLVTHEILARDNAQGLLHVRLAVLPRAWIA GLLAALGEAGLAAVRIEAASAEDEAVFALPGARRQSRVPPALALLAAGLAALCLAIPPARQALALHRLDAARAALAPRLR LAEALRARLAAEDRFRAALGAEAAREGDTLLMLAALTRALPDRSYLTDLSLRDRVATLDGESPNAAGLVARLAADPHFAD PAFAAPVTRSLNGGGDVFSIRVRLRDDEAG
Sequences:
>Translated_350_residues MTRNLNFQFFLSRVTRTSMDFLHWYIASLRSLVPGALRRPAGQDAAMTVTAAAGAPPEAAEITQEGRGGARALGRLGQMR RSAVIRPVVLRLRGAGALIRRVTLPAAARRDLAAALAFEIDRLTPFTADEVLVTHEILARDNAQGLLHVRLAVLPRAWIA GLLAALGEAGLAAVRIEAASAEDEAVFALPGARRQSRVPPALALLAAGLAALCLAIPPARQALALHRLDAARAALAPRLR LAEALRARLAAEDRFRAALGAEAAREGDTLLMLAALTRALPDRSYLTDLSLRDRVATLDGESPNAAGLVARLAADPHFAD PAFAAPVTRSLNGGGDVFSIRVRLRDDEAG >Mature_349_residues TRNLNFQFFLSRVTRTSMDFLHWYIASLRSLVPGALRRPAGQDAAMTVTAAAGAPPEAAEITQEGRGGARALGRLGQMRR SAVIRPVVLRLRGAGALIRRVTLPAAARRDLAAALAFEIDRLTPFTADEVLVTHEILARDNAQGLLHVRLAVLPRAWIAG LLAALGEAGLAAVRIEAASAEDEAVFALPGARRQSRVPPALALLAAGLAALCLAIPPARQALALHRLDAARAALAPRLRL AEALRARLAAEDRFRAALGAEAAREGDTLLMLAALTRALPDRSYLTDLSLRDRVATLDGESPNAAGLVARLAADPHFADP AFAAPVTRSLNGGGDVFSIRVRLRDDEAG
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37046; Mature: 36915
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRNLNFQFFLSRVTRTSMDFLHWYIASLRSLVPGALRRPAGQDAAMTVTAAAGAPPEAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCHHH EITQEGRGGARALGRLGQMRRSAVIRPVVLRLRGAGALIRRVTLPAAARRDLAAALAFEI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH DRLTPFTADEVLVTHEILARDNAQGLLHVRLAVLPRAWIAGLLAALGEAGLAAVRIEAAS HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC AEDEAVFALPGARRQSRVPPALALLAAGLAALCLAIPPARQALALHRLDAARAALAPRLR CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LAEALRARLAAEDRFRAALGAEAAREGDTLLMLAALTRALPDRSYLTDLSLRDRVATLDG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCC ESPNAAGLVARLAADPHFADPAFAAPVTRSLNGGGDVFSIRVRLRDDEAG CCCCHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure TRNLNFQFFLSRVTRTSMDFLHWYIASLRSLVPGALRRPAGQDAAMTVTAAAGAPPEAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCHHH EITQEGRGGARALGRLGQMRRSAVIRPVVLRLRGAGALIRRVTLPAAARRDLAAALAFEI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH DRLTPFTADEVLVTHEILARDNAQGLLHVRLAVLPRAWIAGLLAALGEAGLAAVRIEAAS HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC AEDEAVFALPGARRQSRVPPALALLAAGLAALCLAIPPARQALALHRLDAARAALAPRLR CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LAEALRARLAAEDRFRAALGAEAAREGDTLLMLAALTRALPDRSYLTDLSLRDRVATLDG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCC ESPNAAGLVARLAADPHFADPAFAAPVTRSLNGGGDVFSIRVRLRDDEAG CCCCHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA