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The map label for this gene is oxyR [H]

Identifier: 148259853

GI number: 148259853

Start: 930712

End: 931611

Strand: Reverse

Name: oxyR [H]

Synonym: Acry_0842

Alternate gene names: 148259853

Gene position: 931611-930712 (Counterclockwise)

Preceding gene: 148259854

Following gene: 148259852

Centisome position: 27.49

GC content: 69.44

Gene sequence:

>900_bases
GTGATCGACAAGCTCGAATACCTGCTCGCGCTGGCGCGGGAGGAGCATTTCGGCCGCGGCGCCGAAAGCTGCGGCGTGAC
CCAGCCCACCTTCTCGGCGGGCATCCGCTCGCTCGAGGAGGCGCTGGGGATGCCGCTGGTCGAGCGCTCGTCGCGGTTCC
AGGGGTTCACTCCGGAAGGCGAGCGGGTGCTCGAATGGGCGCGGCGGATCGTCGGCGACATGCATGCCATGCGCGCCGAT
ATCCGCGCCCTCAAGCGCGGGCTCAACGGGCTGCTGCGGATCGCCGCGATTCCGACCGCGCTCGCCACCATCACGGAACT
GACCACGCCGTATCGCCGGCAGCACGAGGCGGTGCGGTTCTCGATCCAGTCCTGCACGTCGAACGAGGTGCTGCGACGGC
TCGACAATTTCGAGGTCGATGCGGGGGTGACCTATATCGACAACGAGCCGATCGGGAAGAACCGGGTGGTGCCGCTCTAT
GACGAGCGCTACCGGCTGCTGACCGCGGCGGACGCGCCGCTCGGCCGGCGCGAGCAGGTGAGCTGGGCGGAGGTCGGCCA
GATTCCGCTCTGCCTGCTGACGCCGGACATGCAGAACCGGCGGATCCTCGACCGGCTGCTGCGCAATGCCGGGACCGAGC
TGCGGCCGACGCTGGAGAGCAACTCGATCGTCGTGCTGGTCAGCCATGTGCAGACCGGGCGCTGGGCCTGCGTGCTGCCG
GAGAAGCTGGCGCAGATCTTCGGGCTGACGCCAAGGCTGCGGGCGATTCCGATCGTGGAGCCGGAGGAGGTTCACGCGGT
CGGGCTGGTGCTGCCGAACCGCGAGCCCGTGTCGCCGCTGGTGGCGGCGCTGGTGAACGTCGCGGAAGGACTGGCGCGGG
GTCAAGCCGCCCTTGCTTGA

Upstream 100 bases:

>100_bases
TGCAGATCGAGACCGTGCCGCAGCGCGAGGCGGACGCGGCGATCCACCGGCTCAAGGCCGGGGATGTGACCGGGCGGCTG
GTGCTGGTGGCCGACGGCGC

Downstream 100 bases:

>100_bases
TAGACGCGCTCTATCAAACAATCCGGGTTTTGGCTTGTTTGCGGGAAGATCATGTGGATAATGCACACGAAAGATTAACC
TGCCCGATTTAAGCAGGAGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MIDKLEYLLALAREEHFGRGAESCGVTQPTFSAGIRSLEEALGMPLVERSSRFQGFTPEGERVLEWARRIVGDMHAMRAD
IRALKRGLNGLLRIAAIPTALATITELTTPYRRQHEAVRFSIQSCTSNEVLRRLDNFEVDAGVTYIDNEPIGKNRVVPLY
DERYRLLTAADAPLGRREQVSWAEVGQIPLCLLTPDMQNRRILDRLLRNAGTELRPTLESNSIVVLVSHVQTGRWACVLP
EKLAQIFGLTPRLRAIPIVEPEEVHAVGLVLPNREPVSPLVAALVNVAEGLARGQAALA

Sequences:

>Translated_299_residues
MIDKLEYLLALAREEHFGRGAESCGVTQPTFSAGIRSLEEALGMPLVERSSRFQGFTPEGERVLEWARRIVGDMHAMRAD
IRALKRGLNGLLRIAAIPTALATITELTTPYRRQHEAVRFSIQSCTSNEVLRRLDNFEVDAGVTYIDNEPIGKNRVVPLY
DERYRLLTAADAPLGRREQVSWAEVGQIPLCLLTPDMQNRRILDRLLRNAGTELRPTLESNSIVVLVSHVQTGRWACVLP
EKLAQIFGLTPRLRAIPIVEPEEVHAVGLVLPNREPVSPLVAALVNVAEGLARGQAALA
>Mature_299_residues
MIDKLEYLLALAREEHFGRGAESCGVTQPTFSAGIRSLEEALGMPLVERSSRFQGFTPEGERVLEWARRIVGDMHAMRAD
IRALKRGLNGLLRIAAIPTALATITELTTPYRRQHEAVRFSIQSCTSNEVLRRLDNFEVDAGVTYIDNEPIGKNRVVPLY
DERYRLLTAADAPLGRREQVSWAEVGQIPLCLLTPDMQNRRILDRLLRNAGTELRPTLESNSIVVLVSHVQTGRWACVLP
EKLAQIFGLTPRLRAIPIVEPEEVHAVGLVLPNREPVSPLVAALVNVAEGLARGQAALA

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI157672245, Length=261, Percent_Identity=28.735632183908, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1790399, Length=296, Percent_Identity=28.3783783783784, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787879, Length=280, Percent_Identity=25.3571428571429, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI145693105, Length=291, Percent_Identity=23.3676975945017, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788748, Length=240, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081904, Length=216, Percent_Identity=25.9259259259259, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786401, Length=173, Percent_Identity=27.7456647398844, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI2367136, Length=147, Percent_Identity=29.9319727891156, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33163; Mature: 33163

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKLEYLLALAREEHFGRGAESCGVTQPTFSAGIRSLEEALGMPLVERSSRFQGFTPEG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCH
ERVLEWARRIVGDMHAMRADIRALKRGLNGLLRIAAIPTALATITELTTPYRRQHEAVRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SIQSCTSNEVLRRLDNFEVDAGVTYIDNEPIGKNRVVPLYDERYRLLTAADAPLGRREQV
HHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC
SWAEVGQIPLCLLTPDMQNRRILDRLLRNAGTELRPTLESNSIVVLVSHVQTGRWACVLP
CHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECH
EKLAQIFGLTPRLRAIPIVEPEEVHAVGLVLPNREPVSPLVAALVNVAEGLARGQAALA
HHHHHHHCCCCCCCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MIDKLEYLLALAREEHFGRGAESCGVTQPTFSAGIRSLEEALGMPLVERSSRFQGFTPEG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCH
ERVLEWARRIVGDMHAMRADIRALKRGLNGLLRIAAIPTALATITELTTPYRRQHEAVRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SIQSCTSNEVLRRLDNFEVDAGVTYIDNEPIGKNRVVPLYDERYRLLTAADAPLGRREQV
HHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC
SWAEVGQIPLCLLTPDMQNRRILDRLLRNAGTELRPTLESNSIVVLVSHVQTGRWACVLP
CHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECH
EKLAQIFGLTPRLRAIPIVEPEEVHAVGLVLPNREPVSPLVAALVNVAEGLARGQAALA
HHHHHHHCCCCCCCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA