| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148259801
Identifier: 148259801
GI number: 148259801
Start: 877365
End: 878573
Strand: Reverse
Name: 148259801
Synonym: Acry_0790
Alternate gene names: NA
Gene position: 878573-877365 (Counterclockwise)
Preceding gene: 148259808
Following gene: 148259800
Centisome position: 25.92
GC content: 62.45
Gene sequence:
>1209_bases ATGACCGAAGATAGATTACCACTGGCTGAGCTACTGGCCAAAGCCGGGGACGGCGATTTTCTGCGCAGCGTTGCGGAGGC GGTGGTTCAACTGCTGATGGAGACGGATGTGGATGGGCTGATCGGCGCCAGCCGCTACGAGCGCAGCGGCGAGCGCGCGA CCTATCGCAACGGCTACCGGGAACGCGCATTGGACACGCGGCTTGGCAGCTTGCAGCTTCGGATCCCGAAGCTGCGGCAG GGGAGCTACTTCCCGCCGTTCCTGGAAGCTCGCCGGACCTCGGAGAAGGCGCTGGCCGCGGTCATCCAGGAAGCCTGGAT TGGCGGCGTCTCGACCCGGCGGGTAGACGAGCTGGTGCAGGCCATGGGGCTGACGGGGATCAGCAAGAGCACGGTCTCGA AACTGTGCAAGGACATCGATGAGAGGGTGAACGCCTTCCTCGACCGGCCACTCGCCGGCGAGTGGCCGTATCTGTGGTTG GATGCGACCTATCTCAAGCAGCGCGAAGGTGGGCGGATCGTCTCAGTTGCGGCGATAATCGCAGTGGCGGTGAACACCGA CGGTCGGCGCGAGATCGTCGGCCTGCACATCGGCCCGTCCGAGGCGGAGACCTTCTGGTCGACCTTTCTCAAGAGCTTGG TCCGCCGTGGGTTGCGTGAGGTGAAACTGGTGATCTCCGATGCTCATGAAGGGTTGAAGGCGGCGATCCGCCGGGTGATG GGGGCATCCTGGCAAAGATGCCGCGTTCACTGGATGCGCAACGCCTTGTCCTATGTGCCGAAGGGGCAGCAGAGCATGGT GTCTGCAGCGTTGCGTCAGGCGTTTATCCAGCCGGATCGCGTCAGTGCCAGCCAGACCCTGCGCCATGTGGCCGACCAGC TCCGGGGCAAATGGCCAAAACTTGGCGCGTTCATCGACGACAGTGAAACCGACGTGCTGGCGCACATGGACTTTCCCGCC CAGCACCGAACCAAAATTCACTCGACGAATCCGCTCGAACGCCTGAACAAGGAGGTCAAGCGCCGCGCCGATGTCGTCGG CATCTTTCCCAATGAAGGTTCGATCATCCGCCTGATCGGGGCCGTGCTGCTCGAGGCCAACGACGAATGGCAAACACAGA ACCGCTATATGCAGATCGAGGGAATGGTCGAACTCATGGCACCCGCCATCGATGCCGATACACCACGAATTTCCACCGTC GCCGCGTGA
Upstream 100 bases:
>100_bases GTGGACTTTTGGGCCCTGTAACGGTGTAGTTTGAGGTGGCCATCGGATCAGTCGGCTATGGTGGAGTTGCGAGACTTCAA CCTGAAGCCTGGAGAACCCG
Downstream 100 bases:
>100_bases CCATTGGCCGCTTCAGCTACACCAGAATTTCCACCACATTGACGGACGCTATCGGCCGTTCCACCCCAACACTTCTCAGT GGAAAGCAACAACGGGACCC
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYRERALDTRLGSLQLRIPKLRQ GSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQAMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWL DATYLKQREGGRIVSVAAIIAVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPKLGAFIDDSETDVLAHMDFPA QHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIGAVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTV AA
Sequences:
>Translated_402_residues MTEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYRERALDTRLGSLQLRIPKLRQ GSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQAMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWL DATYLKQREGGRIVSVAAIIAVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPKLGAFIDDSETDVLAHMDFPA QHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIGAVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTV AA >Mature_401_residues TEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYRERALDTRLGSLQLRIPKLRQG SYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQAMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWLD ATYLKQREGGRIVSVAAIIAVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVMG ASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPKLGAFIDDSETDVLAHMDFPAQ HRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIGAVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTVA A
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 44924; Mature: 44793
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYR CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHCCHH ERALDTRLGSLQLRIPKLRQGSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQ HHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWLDATYLKQREGGRIVSVAAII HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHH AVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM HHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPK CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC LGAFIDDSETDVLAHMDFPAQHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIG CCCEECCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHH AVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTVAA HHHHCCCCCHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYR CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHCCHH ERALDTRLGSLQLRIPKLRQGSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQ HHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWLDATYLKQREGGRIVSVAAII HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHH AVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM HHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPK CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC LGAFIDDSETDVLAHMDFPAQHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIG CCCEECCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHH AVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTVAA HHHHCCCCCHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]