Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is yfgL [C]

Identifier: 148259763

GI number: 148259763

Start: 841295

End: 842656

Strand: Reverse

Name: yfgL [C]

Synonym: Acry_0751

Alternate gene names: 148259763

Gene position: 842656-841295 (Counterclockwise)

Preceding gene: 148259764

Following gene: 148259762

Centisome position: 24.86

GC content: 71.59

Gene sequence:

>1362_bases
ATGACAAGCCGCACCATGACCGACCTTCGCGCCCTTTCCACTCTCGGGCGGCGCGGCGCGCTGCTCTCCTCGATGGCGCT
GCTCACCGGATGCAGCCTGTTTTCGAAGGCAGTGAAGCCGCCGGTTCCCGGCCGCAAAATCCCGGTCCTGCCGCCGCACA
ATCCGCTTTCCGTCTCCAGCGGCGCGCCCGCGGTGACGCTGCCGGCGCCGCGCAGCCACGCGGTCTGGGGACAGGCGGGC
GCCAATGCCGCGCATGATGCCGGCGTCAGCGCCCTGCCCGCGCGGCTGACCATGGCATGGCGCCGGGATGTCGGCGCCGG
AGCCACCTATCGCCGCACGCTGCACGCCGCCCCGGTCGCCGCCGGCGGGCGCGTGTTCACGATGGATGCGCTTGGCGTGG
TCGAAGCCCATTCGATCGCCAGCGGCCAGCGGCTCTGGCGCCACCCCATGCGCCCGAAGCACGACAACAGCTTCGCCTAT
GGCGGCGGGCTGGCGGCGGACGGCACCACGCTCTACGTCGCGTCCGGCTTCAGCCAGCTCCTGGCCCTCGATCCGGCCAG
CGGCAAGCCGCGCTGGACCAAGACGCTCGACCAGCCGTTCCGCTCGGCGCCAGGCCTTGGCGGCGGGCTGATCTTCGTCA
TCATGCTCGACGACACGCTGCAGGCCTTCGATGCGAAGACCGGCGACTTTGCCTGGCGCTTCCCCACCGGCAACGGCTCG
GGCGGCTCGATGTTCGGCGCCGGCACGCCGGCCTATCAGGATGGCATCGTCGTCGCCGGTTTCGGCTCGGGCGTGTTCGC
CGGCGTGAACGCGACCGGCGGCTCCGCCGTCTGGGAGCAGAGCCTCGCGGCCGGGTATGACCAGACCAATCCGCTCGACG
TGTCCAGCATCGTGGCGAGCCCTGTGATCGCCGGGGGTCTGGCGATCGCCACCGGCCTCGCGGGCACCACCGTCGCGTTC
GACTTGCATTCGGGACGGCGCATCTGGGGGATCAGCGCGGGCGGCAGCGAGACCCCGGCCGTCGCCGGCGACTGGCTGTT
CCTGCTGACGGAAAACCAGCGCCTCGCCGCGATCCATGTCGCTGACGGCGCCGTCGCGTGGGTGACCGAACTGCCGGCCT
ATGGCGATCCGAAGCGGCACAAGCAGCCGATTTCGTGGCATGGCCCGCTCGCCGCCGGCGCCGGCCTGGTCCTGACCGGT
TCCGACAAGCGGATGATCGTGGTCGATGCCGCGACGGGCCGGCTGACCACTCCGCTCGCCGCCGGCCTCGCGCTCGACGG
AGAGGCCGATCTTGCCCCGATCGCCGCCGCGGGAACGCTGTTCGCGCTGACCCGCAACGCGGTGCTGACCGCCTATCGAT
GA

Upstream 100 bases:

>100_bases
CGAAGTCGGCGCATGGCCTGCTCGAAGAGGTGAGCGCCGATCCCGCCTCGCCGCCCAACCTGCGGAACCTCGCCCAGGGC
CTGATCGCGAAACTGAACGG

Downstream 100 bases:

>100_bases
CCACCTCCCCTGCCCGCACCCCGCGGGTCGCGATCTGCGGGCGGCCGAATGTCGGCAAATCCACCCTGTTCAACCGGTTG
GCGGGCAAGCGTATCGCGCT

Product: Pyrrolo-quinoline quinone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSSGAPAVTLPAPRSHAVWGQAG
ANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVAAGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAY
GGGLAADGTTLYVASGFSQLLALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS
GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVASPVIAGGLAIATGLAGTTVAF
DLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHVADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTG
SDKRMIVVDAATGRLTTPLAAGLALDGEADLAPIAAAGTLFALTRNAVLTAYR

Sequences:

>Translated_453_residues
MTSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSSGAPAVTLPAPRSHAVWGQAG
ANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVAAGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAY
GGGLAADGTTLYVASGFSQLLALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS
GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVASPVIAGGLAIATGLAGTTVAF
DLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHVADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTG
SDKRMIVVDAATGRLTTPLAAGLALDGEADLAPIAAAGTLFALTRNAVLTAYR
>Mature_452_residues
TSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSSGAPAVTLPAPRSHAVWGQAGA
NAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVAAGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAYG
GGLAADGTTLYVASGFSQLLALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGSG
GSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVASPVIAGGLAIATGLAGTTVAFD
LHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHVADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTGS
DKRMIVVDAATGRLTTPLAAGLALDGEADLAPIAAAGTLFALTRNAVLTAYR

Specific function: Unknown

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788859, Length=362, Percent_Identity=26.2430939226519, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 46378; Mature: 46247

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECC
GAPAVTLPAPRSHAVWGQAGANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVA
CCCEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCC
AGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAYGGGLAADGTTLYVASGFSQL
CCCEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCEECCCCEEEEECCCHHH
LALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS
EEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCCCEEEEECCCCCC
GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVAS
CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
PVIAGGLAIATGLAGTTVAFDLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHV
HHHHCHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEE
ADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTGSDKRMIVVDAATGRLTTPLA
CCCCEEEEECCCCCCCHHHCCCCCCCCCCHHCCCCEEEECCCCEEEEEECCCCCCCCHHH
AGLALDGEADLAPIAAAGTLFALTRNAVLTAYR
HCEEECCCCCCCHHHHHHHEEEEECCEEEEECC
>Mature Secondary Structure 
TSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECC
GAPAVTLPAPRSHAVWGQAGANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVA
CCCEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCC
AGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAYGGGLAADGTTLYVASGFSQL
CCCEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCEECCCCEEEEECCCHHH
LALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS
EEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCCCEEEEECCCCCC
GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVAS
CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
PVIAGGLAIATGLAGTTVAFDLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHV
HHHHCHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEE
ADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTGSDKRMIVVDAATGRLTTPLA
CCCCEEEEECCCCCCCHHHCCCCCCCCCCHHCCCCEEEECCCCEEEEEECCCCCCCCHHH
AGLALDGEADLAPIAAAGTLFALTRNAVLTAYR
HCEEECCCCCCCHHHHHHHEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]