| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yfgL [C]
Identifier: 148259763
GI number: 148259763
Start: 841295
End: 842656
Strand: Reverse
Name: yfgL [C]
Synonym: Acry_0751
Alternate gene names: 148259763
Gene position: 842656-841295 (Counterclockwise)
Preceding gene: 148259764
Following gene: 148259762
Centisome position: 24.86
GC content: 71.59
Gene sequence:
>1362_bases ATGACAAGCCGCACCATGACCGACCTTCGCGCCCTTTCCACTCTCGGGCGGCGCGGCGCGCTGCTCTCCTCGATGGCGCT GCTCACCGGATGCAGCCTGTTTTCGAAGGCAGTGAAGCCGCCGGTTCCCGGCCGCAAAATCCCGGTCCTGCCGCCGCACA ATCCGCTTTCCGTCTCCAGCGGCGCGCCCGCGGTGACGCTGCCGGCGCCGCGCAGCCACGCGGTCTGGGGACAGGCGGGC GCCAATGCCGCGCATGATGCCGGCGTCAGCGCCCTGCCCGCGCGGCTGACCATGGCATGGCGCCGGGATGTCGGCGCCGG AGCCACCTATCGCCGCACGCTGCACGCCGCCCCGGTCGCCGCCGGCGGGCGCGTGTTCACGATGGATGCGCTTGGCGTGG TCGAAGCCCATTCGATCGCCAGCGGCCAGCGGCTCTGGCGCCACCCCATGCGCCCGAAGCACGACAACAGCTTCGCCTAT GGCGGCGGGCTGGCGGCGGACGGCACCACGCTCTACGTCGCGTCCGGCTTCAGCCAGCTCCTGGCCCTCGATCCGGCCAG CGGCAAGCCGCGCTGGACCAAGACGCTCGACCAGCCGTTCCGCTCGGCGCCAGGCCTTGGCGGCGGGCTGATCTTCGTCA TCATGCTCGACGACACGCTGCAGGCCTTCGATGCGAAGACCGGCGACTTTGCCTGGCGCTTCCCCACCGGCAACGGCTCG GGCGGCTCGATGTTCGGCGCCGGCACGCCGGCCTATCAGGATGGCATCGTCGTCGCCGGTTTCGGCTCGGGCGTGTTCGC CGGCGTGAACGCGACCGGCGGCTCCGCCGTCTGGGAGCAGAGCCTCGCGGCCGGGTATGACCAGACCAATCCGCTCGACG TGTCCAGCATCGTGGCGAGCCCTGTGATCGCCGGGGGTCTGGCGATCGCCACCGGCCTCGCGGGCACCACCGTCGCGTTC GACTTGCATTCGGGACGGCGCATCTGGGGGATCAGCGCGGGCGGCAGCGAGACCCCGGCCGTCGCCGGCGACTGGCTGTT CCTGCTGACGGAAAACCAGCGCCTCGCCGCGATCCATGTCGCTGACGGCGCCGTCGCGTGGGTGACCGAACTGCCGGCCT ATGGCGATCCGAAGCGGCACAAGCAGCCGATTTCGTGGCATGGCCCGCTCGCCGCCGGCGCCGGCCTGGTCCTGACCGGT TCCGACAAGCGGATGATCGTGGTCGATGCCGCGACGGGCCGGCTGACCACTCCGCTCGCCGCCGGCCTCGCGCTCGACGG AGAGGCCGATCTTGCCCCGATCGCCGCCGCGGGAACGCTGTTCGCGCTGACCCGCAACGCGGTGCTGACCGCCTATCGAT GA
Upstream 100 bases:
>100_bases CGAAGTCGGCGCATGGCCTGCTCGAAGAGGTGAGCGCCGATCCCGCCTCGCCGCCCAACCTGCGGAACCTCGCCCAGGGC CTGATCGCGAAACTGAACGG
Downstream 100 bases:
>100_bases CCACCTCCCCTGCCCGCACCCCGCGGGTCGCGATCTGCGGGCGGCCGAATGTCGGCAAATCCACCCTGTTCAACCGGTTG GCGGGCAAGCGTATCGCGCT
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSSGAPAVTLPAPRSHAVWGQAG ANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVAAGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAY GGGLAADGTTLYVASGFSQLLALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVASPVIAGGLAIATGLAGTTVAF DLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHVADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTG SDKRMIVVDAATGRLTTPLAAGLALDGEADLAPIAAAGTLFALTRNAVLTAYR
Sequences:
>Translated_453_residues MTSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSSGAPAVTLPAPRSHAVWGQAG ANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVAAGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAY GGGLAADGTTLYVASGFSQLLALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVASPVIAGGLAIATGLAGTTVAF DLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHVADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTG SDKRMIVVDAATGRLTTPLAAGLALDGEADLAPIAAAGTLFALTRNAVLTAYR >Mature_452_residues TSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSSGAPAVTLPAPRSHAVWGQAGA NAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVAAGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAYG GGLAADGTTLYVASGFSQLLALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGSG GSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVASPVIAGGLAIATGLAGTTVAFD LHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHVADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTGS DKRMIVVDAATGRLTTPLAAGLALDGEADLAPIAAAGTLFALTRNAVLTAYR
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788859, Length=362, Percent_Identity=26.2430939226519, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 [H]
Pfam domain/function: PF01011 PQQ [H]
EC number: NA
Molecular weight: Translated: 46378; Mature: 46247
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECC GAPAVTLPAPRSHAVWGQAGANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVA CCCEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCC AGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAYGGGLAADGTTLYVASGFSQL CCCEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCEECCCCEEEEECCCHHH LALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS EEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCCCEEEEECCCCCC GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVAS CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH PVIAGGLAIATGLAGTTVAFDLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHV HHHHCHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEE ADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTGSDKRMIVVDAATGRLTTPLA CCCCEEEEECCCCCCCHHHCCCCCCCCCCHHCCCCEEEECCCCEEEEEECCCCCCCCHHH AGLALDGEADLAPIAAAGTLFALTRNAVLTAYR HCEEECCCCCCCHHHHHHHEEEEECCEEEEECC >Mature Secondary Structure TSRTMTDLRALSTLGRRGALLSSMALLTGCSLFSKAVKPPVPGRKIPVLPPHNPLSVSS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECC GAPAVTLPAPRSHAVWGQAGANAAHDAGVSALPARLTMAWRRDVGAGATYRRTLHAAPVA CCCEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCC AGGRVFTMDALGVVEAHSIASGQRLWRHPMRPKHDNSFAYGGGLAADGTTLYVASGFSQL CCCEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCEECCCCEEEEECCCHHH LALDPASGKPRWTKTLDQPFRSAPGLGGGLIFVIMLDDTLQAFDAKTGDFAWRFPTGNGS EEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCCCEEEEECCCCCC GGSMFGAGTPAYQDGIVVAGFGSGVFAGVNATGGSAVWEQSLAAGYDQTNPLDVSSIVAS CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH PVIAGGLAIATGLAGTTVAFDLHSGRRIWGISAGGSETPAVAGDWLFLLTENQRLAAIHV HHHHCHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEE ADGAVAWVTELPAYGDPKRHKQPISWHGPLAAGAGLVLTGSDKRMIVVDAATGRLTTPLA CCCCEEEEECCCCCCCHHHCCCCCCCCCCHHCCCCEEEECCCCEEEEEECCCCCCCCHHH AGLALDGEADLAPIAAAGTLFALTRNAVLTAYR HCEEECCCCCCCHHHHHHHEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]