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The map label for this gene is ygdK [C]

Identifier: 148259738

GI number: 148259738

Start: 810525

End: 810962

Strand: Reverse

Name: ygdK [C]

Synonym: Acry_0725

Alternate gene names: 148259738

Gene position: 810962-810525 (Counterclockwise)

Preceding gene: 148259739

Following gene: 148259736

Centisome position: 23.93

GC content: 68.72

Gene sequence:

>438_bases
ATGAGCGCGCCGCCCTTCGTCACCCCCGCGCAGGAGAGCGCCGCCGCGGCGATCGCCGCCCTGCACGACGAGCTGTTCCT
GTTCGATGACTGGATGGACCGCTACCAGTTCATCATCGAACTCGGCCAGTCGCTGCCCACCTTCCCCGAGGCGCTGAAGA
CCGACGACCGGCTGGTGCCCGGCTGCCAGAGCCGGGTCTGGCTGGAGCCGAAGCTGGAAGGCGGGAAACTCTATTTCGCC
GGCGCGTCGGACGCCGCCATCGTCAGCGGCCTCGTCGCCATGCTGCTGCAGGTCTATTCCGGCCGCACGCCCGCGGAAAT
CCGCGAAACACCGCCGGCCTTCCTCAAGGAATGGGGGCTGATCGGCGCCCTGTCCGGCAATCGCGGCAACGGCGTCGCGG
CGATGGCCGAACGCATCCAGCGCTTCGCCGCCTCATAA

Upstream 100 bases:

>100_bases
CGATCGCCGACGAGGCGCACACGATCACCCTCGCCGACGTGATCGACGGCGCGGCCAAGCTCTCGGCCGGCAAGAAGCAC
CACCGCCTGGTGCGCCCGGC

Downstream 100 bases:

>100_bases
GTCCGGCGCGCTGCCGCCGCTGATCTCGCGCACGATATAGAGCGGCCGCTGCTTGCTCTCCTCGTAGAGCCGGCCGAGAT
ATTCGCCGATCATCCCGAGG

Product: Fe-S metabolism associated SufE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSAPPFVTPAQESAAAAIAALHDELFLFDDWMDRYQFIIELGQSLPTFPEALKTDDRLVPGCQSRVWLEPKLEGGKLYFA
GASDAAIVSGLVAMLLQVYSGRTPAEIRETPPAFLKEWGLIGALSGNRGNGVAAMAERIQRFAAS

Sequences:

>Translated_145_residues
MSAPPFVTPAQESAAAAIAALHDELFLFDDWMDRYQFIIELGQSLPTFPEALKTDDRLVPGCQSRVWLEPKLEGGKLYFA
GASDAAIVSGLVAMLLQVYSGRTPAEIRETPPAFLKEWGLIGALSGNRGNGVAAMAERIQRFAAS
>Mature_144_residues
SAPPFVTPAQESAAAAIAALHDELFLFDDWMDRYQFIIELGQSLPTFPEALKTDDRLVPGCQSRVWLEPKLEGGKLYFAG
ASDAAIVSGLVAMLLQVYSGRTPAEIRETPPAFLKEWGLIGALSGNRGNGVAAMAERIQRFAAS

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1789176, Length=114, Percent_Identity=40.3508771929825, Blast_Score=90, Evalue=6e-20,
Organism=Escherichia coli, GI1787969, Length=109, Percent_Identity=36.697247706422, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 15670; Mature: 15539

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPPFVTPAQESAAAAIAALHDELFLFDDWMDRYQFIIELGQSLPTFPEALKTDDRLVP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC
GCQSRVWLEPKLEGGKLYFAGASDAAIVSGLVAMLLQVYSGRTPAEIRETPPAFLKEWGL
CCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCC
IGALSGNRGNGVAAMAERIQRFAAS
EEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAPPFVTPAQESAAAAIAALHDELFLFDDWMDRYQFIIELGQSLPTFPEALKTDDRLVP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC
GCQSRVWLEPKLEGGKLYFAGASDAAIVSGLVAMLLQVYSGRTPAEIRETPPAFLKEWGL
CCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCC
IGALSGNRGNGVAAMAERIQRFAAS
EEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7756693; 11481430 [H]