| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259587
Identifier: 148259587
GI number: 148259587
Start: 642316
End: 643050
Strand: Reverse
Name: 148259587
Synonym: Acry_0571
Alternate gene names: NA
Gene position: 643050-642316 (Counterclockwise)
Preceding gene: 148259588
Following gene: 148259586
Centisome position: 18.97
GC content: 65.85
Gene sequence:
>735_bases ATGAAATCCGCAAGTTTGCGCCGCACCGCGCGGCGCGCGACCAGGGCCGGGATCGTCACCTGCATCTCGACCATCGCGAT CACCGCAACCGCGCGGGCCGCCCCGCACACGAACCTGTTCATCGCCGGCGGCCAGTATGCCAACTCGTCGCAGAGCGCGT ATCTCGGCGCGATCCTGCCATTGCCGGGCGGAACGCTGGGCAAGGGGTTCTTCGTCTCGCCGTTCGCCGGCTGGAACCGC TACACCTTCCAGAAGAACGGGCAGAGCTTCACCGGAAGCGAGCCGTCCGCGAGTGTCGCCATTGGCCACGCCTGGGACGA GCCGGATTTCAACCTGAGCCTTTCGGTAGCCGGCGGGTATTCGAATACCACAGTGACGCCCTATGCGCCGAAGGGATCGT TCCACGGCGGCCAGTGGTTCGCGGAGCCGGAAATCTATGCCCAGCTCAAGCTTCCGGCCGGGGCCACGGCAACCGTGAAC GGCGGCTACCTGACCGGCATGCGGAGCTACTGGAGCAGCGCCTACCTGCTGGTGCCGGTTTCGCCCTCGATCGCGATCGG GCCCGAGGCCGATTTCGGCGGCGGCATCAACTATCGTTCCCGCACCTTCGCGCTGCGCGTTGCCGACAAGCTGACCAGTT CCCTCGATGTCGATCTGTCCGCCGGCGCGACGACGAACCTTCCGGGTCCGTATCACCCGTATGTCGCCCTGAATCTCAGC GTGCCGTTCCGGTAA
Upstream 100 bases:
>100_bases CCGTGCTTGGCACGCTGGTGATCCTGATCCTGCTGGTCCGGACCTTCGTGACGCTCAGGCGGCGGCGGCTGCACCCCTCA GTAAAAGGAGTCGACGAGCG
Downstream 100 bases:
>100_bases TCGCATGACCGACATGGCGAGACGCAATTTTCTCGGTCTTCTCGGCGCGGCCGCGCTCACGGGCGGCCCGGTGATGATGG CGCGGGAGCTGTGGCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKSASLRRTARRATRAGIVTCISTIAITATARAAPHTNLFIAGGQYANSSQSAYLGAILPLPGGTLGKGFFVSPFAGWNR YTFQKNGQSFTGSEPSASVAIGHAWDEPDFNLSLSVAGGYSNTTVTPYAPKGSFHGGQWFAEPEIYAQLKLPAGATATVN GGYLTGMRSYWSSAYLLVPVSPSIAIGPEADFGGGINYRSRTFALRVADKLTSSLDVDLSAGATTNLPGPYHPYVALNLS VPFR
Sequences:
>Translated_244_residues MKSASLRRTARRATRAGIVTCISTIAITATARAAPHTNLFIAGGQYANSSQSAYLGAILPLPGGTLGKGFFVSPFAGWNR YTFQKNGQSFTGSEPSASVAIGHAWDEPDFNLSLSVAGGYSNTTVTPYAPKGSFHGGQWFAEPEIYAQLKLPAGATATVN GGYLTGMRSYWSSAYLLVPVSPSIAIGPEADFGGGINYRSRTFALRVADKLTSSLDVDLSAGATTNLPGPYHPYVALNLS VPFR >Mature_244_residues MKSASLRRTARRATRAGIVTCISTIAITATARAAPHTNLFIAGGQYANSSQSAYLGAILPLPGGTLGKGFFVSPFAGWNR YTFQKNGQSFTGSEPSASVAIGHAWDEPDFNLSLSVAGGYSNTTVTPYAPKGSFHGGQWFAEPEIYAQLKLPAGATATVN GGYLTGMRSYWSSAYLLVPVSPSIAIGPEADFGGGINYRSRTFALRVADKLTSSLDVDLSAGATTNLPGPYHPYVALNLS VPFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25653; Mature: 25653
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSASLRRTARRATRAGIVTCISTIAITATARAAPHTNLFIAGGQYANSSQSAYLGAILP CCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEEE LPGGTLGKGFFVSPFAGWNRYTFQKNGQSFTGSEPSASVAIGHAWDEPDFNLSLSVAGGY CCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCC SNTTVTPYAPKGSFHGGQWFAEPEIYAQLKLPAGATATVNGGYLTGMRSYWSSAYLLVPV CCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCEEECHHHHHCCEEEEEEC SPSIAIGPEADFGGGINYRSRTFALRVADKLTSSLDVDLSAGATTNLPGPYHPYVALNLS CCCEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEE VPFR CCCC >Mature Secondary Structure MKSASLRRTARRATRAGIVTCISTIAITATARAAPHTNLFIAGGQYANSSQSAYLGAILP CCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEEE LPGGTLGKGFFVSPFAGWNRYTFQKNGQSFTGSEPSASVAIGHAWDEPDFNLSLSVAGGY CCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCC SNTTVTPYAPKGSFHGGQWFAEPEIYAQLKLPAGATATVNGGYLTGMRSYWSSAYLLVPV CCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCEEECHHHHHCCEEEEEEC SPSIAIGPEADFGGGINYRSRTFALRVADKLTSSLDVDLSAGATTNLPGPYHPYVALNLS CCCEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEE VPFR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA