| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is bcsZ [H]
Identifier: 148259586
GI number: 148259586
Start: 641181
End: 642311
Strand: Reverse
Name: bcsZ [H]
Synonym: Acry_0570
Alternate gene names: 148259586
Gene position: 642311-641181 (Counterclockwise)
Preceding gene: 148259587
Following gene: 148259585
Centisome position: 18.95
GC content: 68.44
Gene sequence:
>1131_bases ATGACCGACATGGCGAGACGCAATTTTCTCGGTCTTCTCGGCGCGGCCGCGCTCACGGGCGGCCCGGTGATGATGGCGCG GGAGCTGTGGCAATCGTCCTGGCGCGGCTACCGGCACGGATTCATCGACGGCCAGGGGCGGGTCATCGACTATTCCGCCA ACAAGGGATTCAGCACTTCGGAGGGGCAGTCCTATGGCATGTTCCTCAGTCTCGTCGCCGGCGACCGCGCGACGTTCCGC CGCATCCTGAACTGGACGAACACGAACATGGCGGGCGGGCGCCTCGGGGAGGTGCTCGCGGCGTGGAAATGGGGGCTGCA CGGCGGCAAATGGGGGGTGATCGGCGCCAACTCGGCGGCGGACGCGGATGCGTGGATGGCCTATTCGCTGCTCGAGGCCG CCCGGATCTGGAAGGATCACAATCTCGGCGCCGAGGGGCACAAGCTGGCGACGCGCATCGCCGATGACGAGAGCGTGGCG ATCAACGGATTTGGCCGGGTCCTGATACCCGGCGCCTCCGATTTTCCGGACACGCCGCCCGTCATCGTCGATCCGAGCTA TACGCCGCTGTTTCTGGCCCGCGGCATCGCGCGCGCGACCAACCTGCCGAAATGGCAGGCGATCGCGGCCACGCTGCCAC GGCTGATGACGACGATCTGCCGCAACGGATTCGCCCCCGACTGGGCCTGGGCGCCGCAAGCCCCCGCCTCGCCGCCGGCG GGCCTGCCGGAGACCGGCACCGGATCGTTCGATGCGATCCGGTGCTATCTCTGGGCGGGCCTGACCGCGCCGGAAACGGA GGGGAGCGCGACCGTTCTCGCCTCGCTGAAGGGCATGGCCCGATACTTGGCCACCCACCGCGCGCCGCCGCAGAGCGTCG ATCTCGCGAGCCAGGCGACGCACGGGACGGGCGGGATCGGGTTTTCCGCGGCGCTGCTGCCCTACCTCGCGGCACTCGGG CGCCACCGGCTGCTCCATCAGCAGCTCGGCCGCGTGCTGGCCCAGCGGGAGACCAGCGGCCTGTTCGGCCAGCCCGCCGA CTATTACTCGGAAAACCTGATCCTGTTCGGACTTGGCGGACTTTCGGGAAGCATCCGCTTCGACAAGCAAGGAGGTCTGA TCACGTCATGA
Upstream 100 bases:
>100_bases TCCCTCGATGTCGATCTGTCCGCCGGCGCGACGACGAACCTTCCGGGTCCGTATCACCCGTATGTCGCCCTGAATCTCAG CGTGCCGTTCCGGTAATCGC
Downstream 100 bases:
>100_bases TGCGCCATCTCCCCGCGTTGACCAATGGCCTCACCTTCATCGTCGCCGCAGCCGTGGGCTTCGTGCTCATCGCCGCCACG CTGCTGCCCACGACGGGGCC
Product: endo-1,4-D-glucanase
Products: NA
Alternate protein names: Carboxymethylcellulase; CMCase; Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTDMARRNFLGLLGAAALTGGPVMMARELWQSSWRGYRHGFIDGQGRVIDYSANKGFSTSEGQSYGMFLSLVAGDRATFR RILNWTNTNMAGGRLGEVLAAWKWGLHGGKWGVIGANSAADADAWMAYSLLEAARIWKDHNLGAEGHKLATRIADDESVA INGFGRVLIPGASDFPDTPPVIVDPSYTPLFLARGIARATNLPKWQAIAATLPRLMTTICRNGFAPDWAWAPQAPASPPA GLPETGTGSFDAIRCYLWAGLTAPETEGSATVLASLKGMARYLATHRAPPQSVDLASQATHGTGGIGFSAALLPYLAALG RHRLLHQQLGRVLAQRETSGLFGQPADYYSENLILFGLGGLSGSIRFDKQGGLITS
Sequences:
>Translated_376_residues MTDMARRNFLGLLGAAALTGGPVMMARELWQSSWRGYRHGFIDGQGRVIDYSANKGFSTSEGQSYGMFLSLVAGDRATFR RILNWTNTNMAGGRLGEVLAAWKWGLHGGKWGVIGANSAADADAWMAYSLLEAARIWKDHNLGAEGHKLATRIADDESVA INGFGRVLIPGASDFPDTPPVIVDPSYTPLFLARGIARATNLPKWQAIAATLPRLMTTICRNGFAPDWAWAPQAPASPPA GLPETGTGSFDAIRCYLWAGLTAPETEGSATVLASLKGMARYLATHRAPPQSVDLASQATHGTGGIGFSAALLPYLAALG RHRLLHQQLGRVLAQRETSGLFGQPADYYSENLILFGLGGLSGSIRFDKQGGLITS >Mature_375_residues TDMARRNFLGLLGAAALTGGPVMMARELWQSSWRGYRHGFIDGQGRVIDYSANKGFSTSEGQSYGMFLSLVAGDRATFRR ILNWTNTNMAGGRLGEVLAAWKWGLHGGKWGVIGANSAADADAWMAYSLLEAARIWKDHNLGAEGHKLATRIADDESVAI NGFGRVLIPGASDFPDTPPVIVDPSYTPLFLARGIARATNLPKWQAIAATLPRLMTTICRNGFAPDWAWAPQAPASPPAG LPETGTGSFDAIRCYLWAGLTAPETEGSATVLASLKGMARYLATHRAPPQSVDLASQATHGTGGIGFSAALLPYLAALGR HRLLHQQLGRVLAQRETSGLFGQPADYYSENLILFGLGGLSGSIRFDKQGGLITS
Specific function: Hydrolyzes carboxymethylcellulose [H]
COG id: COG3405
COG function: function code G; Endoglucanase Y
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]
Homologues:
Organism=Escherichia coli, GI1789951, Length=350, Percent_Identity=38, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR002037 - InterPro: IPR019834 [H]
Pfam domain/function: PF01270 Glyco_hydro_8 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 40130; Mature: 39999
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDMARRNFLGLLGAAALTGGPVMMARELWQSSWRGYRHGFIDGQGRVIDYSANKGFSTS CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCC EGQSYGMFLSLVAGDRATFRRILNWTNTNMAGGRLGEVLAAWKWGLHGGKWGVIGANSAA CCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC DADAWMAYSLLEAARIWKDHNLGAEGHKLATRIADDESVAINGFGRVLIPGASDFPDTPP CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCC VIVDPSYTPLFLARGIARATNLPKWQAIAATLPRLMTTICRNGFAPDWAWAPQAPASPPA EEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GLPETGTGSFDAIRCYLWAGLTAPETEGSATVLASLKGMARYLATHRAPPQSVDLASQAT CCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC HGTGGIGFSAALLPYLAALGRHRLLHQQLGRVLAQRETSGLFGQPADYYSENLILFGLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECC LSGSIRFDKQGGLITS CCCCEEECCCCCCCCC >Mature Secondary Structure TDMARRNFLGLLGAAALTGGPVMMARELWQSSWRGYRHGFIDGQGRVIDYSANKGFSTS CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCC EGQSYGMFLSLVAGDRATFRRILNWTNTNMAGGRLGEVLAAWKWGLHGGKWGVIGANSAA CCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC DADAWMAYSLLEAARIWKDHNLGAEGHKLATRIADDESVAINGFGRVLIPGASDFPDTPP CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCC VIVDPSYTPLFLARGIARATNLPKWQAIAATLPRLMTTICRNGFAPDWAWAPQAPASPPA EEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GLPETGTGSFDAIRCYLWAGLTAPETEGSATVLASLKGMARYLATHRAPPQSVDLASQAT CCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC HGTGGIGFSAALLPYLAALGRHRLLHQQLGRVLAQRETSGLFGQPADYYSENLILFGLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECC LSGSIRFDKQGGLITS CCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]