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The map label for this gene is 148259563

Identifier: 148259563

GI number: 148259563

Start: 610910

End: 611998

Strand: Reverse

Name: 148259563

Synonym: Acry_0547

Alternate gene names: NA

Gene position: 611998-610910 (Counterclockwise)

Preceding gene: 148259564

Following gene: 148259558

Centisome position: 18.06

GC content: 69.79

Gene sequence:

>1089_bases
ATGGAAACGGTCATTCCCCGAAAGCTGCGGCCGGATGGTCGCGGCACAAGACTGGACCCGCCGAACCGGTTCGAGACGGT
GCGGCAGGACGCATTCGATGACGGTTGGGGCACGCTGGACGAAGCGCCGCCGCCACCGGCCACCGTGCTGATCCGCGATG
CGACGAAATCGGTCATCAGCCGGAACGACAGCCCGGATCTCGGCTTCGATCGCGGGCTGAATCCCTATCGGGGCTGCGAG
CATGGCTGCATCTATTGCTATGCGCGGCCGACCCATGCGTGGATCGGCATGTCGCCGGGGCTCGATTTCGAGACGAAGCT
GGTCTTCAAGCCGGAGGCGGCGACGCTTCTGGAACGGGAGCTTTCGCGCAAGGGCTACCAGGCGGCGCCGATCGTGCTCG
GATCGAACACCGACCCGTATCAGCCGGTGGAGCGGCAGCTGCGGCTGACCCGCGCGGTGCTGGAAGTTCTGGAGCGGTTC
GGGCATCCGGTGTCCATCGTCACCAAGTCGGCCGGGGTGCTGCGGGATGTCGACATTCTCGGGCGGATGGCAGCGCGCAA
CCTGGCCCGTGTGCACCTCTCGGTGACGACGCTGGACGCGCGACTCGCGCGGGCGATGGAGCCGCGCGCGGCGGCGCCGG
GGCGGCGGCTCGATGCGATCACCGGACTGAAGGCGGCGGGAATTCCGGTCGGCGTGCTGGCGGCGCCGATGATACCGGGG
GTGAACGACGCCGAGCTCGAGCGGATTCTCGAGGCGAGCGCCAAGGCCGGCGCGTCCTGCGCCAGCGCCATCCTGCTGCG
CCTGCCGCATGAACTCGGCGCATTGTTCGAGGACTGGCTGAAGCGCACCATGCCCGACCGTGCCGCGCATGTGCTGAGCC
TGATCCGCCAGACCCGCGGCGGCGCGCTCAACGATGCCGCGTTCGGCAGCCGGTTCCGCGGCACCGGCGCATATGCCGCG
CTGCTGCGCGCGCGCTTCCACCGGGCGGCGCGGCAGTTCGGGCTGAGCGACGCGCCGCCGCCGCTCGATTGCGGGCAGTT
CGCGAAGCCGCCGGCGAAGGCGGCATCCGCCCAGCTTTCGCTGTTCTGA

Upstream 100 bases:

>100_bases
GGGCGTAGCTGACGGGCGTAGCTGAAACAGTCCATGTTCCGTTTTTGTTCTTGACTTCGCGCCGGAATTCCGGTGTGTTG
ACCAAGAACGGAACGAGAAC

Downstream 100 bases:

>100_bases
CGTGGCGCCGGGTCAGGCGTTCTTCAGATAGGCGTCGTACTCGACGTCCGAGATCCGGCGACGGAACTCGGCGATTTCCT
GGCGCTTGCAGGCGGCGAAG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
METVIPRKLRPDGRGTRLDPPNRFETVRQDAFDDGWGTLDEAPPPPATVLIRDATKSVISRNDSPDLGFDRGLNPYRGCE
HGCIYCYARPTHAWIGMSPGLDFETKLVFKPEAATLLERELSRKGYQAAPIVLGSNTDPYQPVERQLRLTRAVLEVLERF
GHPVSIVTKSAGVLRDVDILGRMAARNLARVHLSVTTLDARLARAMEPRAAAPGRRLDAITGLKAAGIPVGVLAAPMIPG
VNDAELERILEASAKAGASCASAILLRLPHELGALFEDWLKRTMPDRAAHVLSLIRQTRGGALNDAAFGSRFRGTGAYAA
LLRARFHRAARQFGLSDAPPPLDCGQFAKPPAKAASAQLSLF

Sequences:

>Translated_362_residues
METVIPRKLRPDGRGTRLDPPNRFETVRQDAFDDGWGTLDEAPPPPATVLIRDATKSVISRNDSPDLGFDRGLNPYRGCE
HGCIYCYARPTHAWIGMSPGLDFETKLVFKPEAATLLERELSRKGYQAAPIVLGSNTDPYQPVERQLRLTRAVLEVLERF
GHPVSIVTKSAGVLRDVDILGRMAARNLARVHLSVTTLDARLARAMEPRAAAPGRRLDAITGLKAAGIPVGVLAAPMIPG
VNDAELERILEASAKAGASCASAILLRLPHELGALFEDWLKRTMPDRAAHVLSLIRQTRGGALNDAAFGSRFRGTGAYAA
LLRARFHRAARQFGLSDAPPPLDCGQFAKPPAKAASAQLSLF
>Mature_362_residues
METVIPRKLRPDGRGTRLDPPNRFETVRQDAFDDGWGTLDEAPPPPATVLIRDATKSVISRNDSPDLGFDRGLNPYRGCE
HGCIYCYARPTHAWIGMSPGLDFETKLVFKPEAATLLERELSRKGYQAAPIVLGSNTDPYQPVERQLRLTRAVLEVLERF
GHPVSIVTKSAGVLRDVDILGRMAARNLARVHLSVTTLDARLARAMEPRAAAPGRRLDAITGLKAAGIPVGVLAAPMIPG
VNDAELERILEASAKAGASCASAILLRLPHELGALFEDWLKRTMPDRAAHVLSLIRQTRGGALNDAAFGSRFRGTGAYAA
LLRARFHRAARQFGLSDAPPPLDCGQFAKPPAKAASAQLSLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39245; Mature: 39245

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVIPRKLRPDGRGTRLDPPNRFETVRQDAFDDGWGTLDEAPPPPATVLIRDATKSVIS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHC
RNDSPDLGFDRGLNPYRGCEHGCIYCYARPTHAWIGMSPGLDFETKLVFKPEAATLLERE
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEECCHHHHHHHHH
LSRKGYQAAPIVLGSNTDPYQPVERQLRLTRAVLEVLERFGHPVSIVTKSAGVLRDVDIL
HHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
GRMAARNLARVHLSVTTLDARLARAMEPRAAAPGRRLDAITGLKAAGIPVGVLAAPMIPG
HHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHCCCCHHHHHHCCCCC
VNDAELERILEASAKAGASCASAILLRLPHELGALFEDWLKRTMPDRAAHVLSLIRQTRG
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GALNDAAFGSRFRGTGAYAALLRARFHRAARQFGLSDAPPPLDCGQFAKPPAKAASAQLS
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC
LF
CC
>Mature Secondary Structure
METVIPRKLRPDGRGTRLDPPNRFETVRQDAFDDGWGTLDEAPPPPATVLIRDATKSVIS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHC
RNDSPDLGFDRGLNPYRGCEHGCIYCYARPTHAWIGMSPGLDFETKLVFKPEAATLLERE
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEECCHHHHHHHHH
LSRKGYQAAPIVLGSNTDPYQPVERQLRLTRAVLEVLERFGHPVSIVTKSAGVLRDVDIL
HHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
GRMAARNLARVHLSVTTLDARLARAMEPRAAAPGRRLDAITGLKAAGIPVGVLAAPMIPG
HHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHCCCCHHHHHHCCCCC
VNDAELERILEASAKAGASCASAILLRLPHELGALFEDWLKRTMPDRAAHVLSLIRQTRG
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GALNDAAFGSRFRGTGAYAALLRARFHRAARQFGLSDAPPPLDCGQFAKPPAKAASAQLS
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC
LF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]