| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is dinG [H]
Identifier: 148259542
GI number: 148259542
Start: 585656
End: 588436
Strand: Reverse
Name: dinG [H]
Synonym: Acry_0526
Alternate gene names: 148259542
Gene position: 588436-585656 (Counterclockwise)
Preceding gene: 148259543
Following gene: 148259541
Centisome position: 17.36
GC content: 70.62
Gene sequence:
>2781_bases ATGGACACCCCGTCGCGCCTGATTCTTCCCGCCGCGCCGTCGCTGGTGACGGCGCATGGCCGGGCGGCTCTCCTCGATCC CGACGGCGAACTGCGACATCTGACCGTGGCCGAGGCACGCGCCGCGCTGCGCGATCTGCCGCCGCCCCTGGTCGTGCATG AGGCGGCGACATTGCAGCGGCTCGACCTGTCGATCCCCGTCCTCGACCTGCTCGACCTCTTCGCTTTCGTCATGCCGGCG GTGACGGCGGCACCAACACCCTCCGGCCTCGCCCGCGCGCTCGATTTCGACCCGCCGGCAACGATCGAGGCCGCCGCCGC CCTGCTGCCGGACATCGCCATCGCCCTGCTCGGCCGGCTCGACCAGAGCGCCTCGCTGCCGATGAATCGCCGGGCCGCCG GGCTCGCCGCACTGATGGGCGAGGCCGGCTGGCCCTGGGCGAAGCCTGTGGCAGCAGCGCTCGGACAGCCGGCAGCAAGG CCGGATCGCGCGGCGTTGCGTCTTGGCATGATCCTGCCCGAATGGCAGGAGGAGGCGCCCCGGCCGCCGCCCTCTTCCTA TCCGGTGCCGCAGGATGCGGCCCGGGGGCGGCTGGCCGACCTGCTCGGCGGCGGCGCAGAACAACGGCCGGCCCAATCCG ATTATGCCTCGGCGGCCACCGCCGCCTTTGCGCCGCCCGCCGCCGAGGGCGTGCCGCATTGCGTGCTTGCCGAGGCGGGC ACCGGCACGGGCAAGACGCTCGGCTATCTCGCCCCGGCCTCGCTCTGGGCGGAGCGCAACCAGGGAAGCGTGTGGATCTC CACCTATACCCGCCACCTTCAGCGGCAGATCGAGCAGGAGTCGGCGCGGCTGGAACCCGATCCGGCGCGGCGACGGCGGC GGGTCGTGCTTCGCAAGGGGCGGGAGAATTATCTCTGCTTGCTGAATTTCGAGGACGCCGCCGCCGGAGCGCGCGGTTAC AATCTGGTTGCCCTCGGGCTGATCGCACGCTGGGCGCTCGCCTCGAGCGATCACGACATCGCTGGAGGTGACCTGCCCGG CTGGTTCGCCGAACTGTTCGGCTCGGGGCTGCTGCCGCAGATTGCCGACCGGCGCGGCGAGTGCATCCATTCAGCCTGCC CGCACTGGAAGCGTTGCACGATCGAACACGTGATCCGCCGCGCCCGCGGTGCCGATCTGGTGATCGCGAACCATGCGCTG GTCATGGCGCAGGCGGTCTGGGGCGGGCTGGACGATTCCAGCGTGCCAACGCGGTATGTGTTCGACGAGGGGCACCACCT GTTCGATGCCGCCGATTCCGCCTTCGCGGCGGAACTCTCCGGCGCGAGCATGGCCGAGTTGCGCCGCTGGCTGCTCGGCG CCGAAGGCGGCCGGTCTCGCGCGCGCGGCCTTGCCCGGCGGCTCGAAGATCTGGTCGCCGCCGATGAACGGCTTGCGGCA CCGCTCGACGCGCTGCGCGCGGCGGCACGGGTGCTGCCGGGAGCGACCATGCTGGCACGACTGGGCGAGCCGACCGCAGC GCTCGACCAGATCGGCCCCGGTGCCGCCGAAGCGTTTCTCACCGCCCTCGCCGCTCAGGCCCGCGCCCGTGCGACCGCAG CCGAGCGCGAGTCGAATCTTGATATCGAGGCGGATCTCTATCCGGCCGAGCCGGAACTGGCCGCCGCCGCATCCGATCTC GCGCGGGATCTCGCCAGACTGGAAGCGCCGCTGACCTCGCTGCGCGAGCGGCTCGCGGCGCGACTCGACGAAGAGGCCGG CACCATCGACAGTACTGAACGGCAGCGCATCGAGGCGGCGATTCGCAGCCTGAAGCGCCGCGCCCTCGATCCGGTGGCGA GCTGGCGGCGCATGCTCGCCGCCGTCAACGAAGCGCCACCCGAGCCTGGCGAGCGGCCGTTCCACGTGCTGTTCATCCGC CAGGGGCGCGACATTGCCCTGCTTTCGCATCTGCTCGACCCGACCGAAGCCTTCGCCGACGCGGTGGCGAGTCGGGCGCA CGGGCTGCTGATCACTTCCGCGACCCTGCGCGACCGCACCACAGCGATGGATGACGTGGAGCAGGATGCCGAATGGCAAC GCGCCGAGTCGCGCACCGGCGCGACCCATCTCGCAGCGCCGGCGATCCGCGCCGCCTTCGCCTCGCCCTTCGACTATCCC GCGCAGACCCGCATCTTCATCGTCCGCGACAATCTGCGCGAGACGCCGGAGGCGCTGGCCTCCGCCTTCCGCGCCCTTTT CCTTGCCTCTGGCGGTGGCGCGCTCGGCCTGTTCACCGCCATCGCGCGGCTGCGCGCCGTGCATGCGCGCATCGCGCCGG CGCTCGATGCCGCAAACATTCCGCTCTTTGCACAGCATGTGGACGCGATGAACAACGCCACGCTGGTCGACAGCTTTCGC GCCGAACAAAATGCCTGTCTTTTAGGCACGGATGCGATGCGGGACGGCGTGGATATTCCGGGCAATGCGCTGCGCCTCGT GGTGTTCGAGCGCACGCCCTGGCCACGGCCCGACATTCTACACCGCGTCCGCCGGACCCACCTCTCGCATGGCGATCCGA AGACCTATGATGACGCCATCGTGCGGCTCCGCCTCAGGCAGGGCTTTGGGCGGCTCATCCGTCGCGCCGGCGACAGAGGC GTATTCGTCCTGCTCGACCGCGCCTTTCCCTCGAGGCTCGAAAGCGCGTTTCCAACCGGCGTCACGGTCAGTCGGCAGGG CCTCGCCGAGACGGTCGCCGCGGTGCGCGAATTTTTTGCCGCAGATCGGGCTTCCGCCTGA
Upstream 100 bases:
>100_bases CGGCGATGTTCGAGGCTGTCGTCGGCGCGCTGCTCGCGCGGATCGCTGCCTGAGTGTCCGGCGCTTTGGCGAAACCGCCA CTGCGGGATAGACAAACCGC
Downstream 100 bases:
>100_bases CTGTAACCAATCTGCCACATTACCATCGAAACTGATTCCACTCCTGGAATGTGAGCGGTTGCGCAATCTTCTGGCATGCG GTTTGCGGCATAATCACGTT
Product: helicase c2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 926; Mature: 926
Protein sequence:
>926_residues MDTPSRLILPAAPSLVTAHGRAALLDPDGELRHLTVAEARAALRDLPPPLVVHEAATLQRLDLSIPVLDLLDLFAFVMPA VTAAPTPSGLARALDFDPPATIEAAAALLPDIAIALLGRLDQSASLPMNRRAAGLAALMGEAGWPWAKPVAAALGQPAAR PDRAALRLGMILPEWQEEAPRPPPSSYPVPQDAARGRLADLLGGGAEQRPAQSDYASAATAAFAPPAAEGVPHCVLAEAG TGTGKTLGYLAPASLWAERNQGSVWISTYTRHLQRQIEQESARLEPDPARRRRRVVLRKGRENYLCLLNFEDAAAGARGY NLVALGLIARWALASSDHDIAGGDLPGWFAELFGSGLLPQIADRRGECIHSACPHWKRCTIEHVIRRARGADLVIANHAL VMAQAVWGGLDDSSVPTRYVFDEGHHLFDAADSAFAAELSGASMAELRRWLLGAEGGRSRARGLARRLEDLVAADERLAA PLDALRAAARVLPGATMLARLGEPTAALDQIGPGAAEAFLTALAAQARARATAAERESNLDIEADLYPAEPELAAAASDL ARDLARLEAPLTSLRERLAARLDEEAGTIDSTERQRIEAAIRSLKRRALDPVASWRRMLAAVNEAPPEPGERPFHVLFIR QGRDIALLSHLLDPTEAFADAVASRAHGLLITSATLRDRTTAMDDVEQDAEWQRAESRTGATHLAAPAIRAAFASPFDYP AQTRIFIVRDNLRETPEALASAFRALFLASGGGALGLFTAIARLRAVHARIAPALDAANIPLFAQHVDAMNNATLVDSFR AEQNACLLGTDAMRDGVDIPGNALRLVVFERTPWPRPDILHRVRRTHLSHGDPKTYDDAIVRLRLRQGFGRLIRRAGDRG VFVLLDRAFPSRLESAFPTGVTVSRQGLAETVAAVREFFAADRASA
Sequences:
>Translated_926_residues MDTPSRLILPAAPSLVTAHGRAALLDPDGELRHLTVAEARAALRDLPPPLVVHEAATLQRLDLSIPVLDLLDLFAFVMPA VTAAPTPSGLARALDFDPPATIEAAAALLPDIAIALLGRLDQSASLPMNRRAAGLAALMGEAGWPWAKPVAAALGQPAAR PDRAALRLGMILPEWQEEAPRPPPSSYPVPQDAARGRLADLLGGGAEQRPAQSDYASAATAAFAPPAAEGVPHCVLAEAG TGTGKTLGYLAPASLWAERNQGSVWISTYTRHLQRQIEQESARLEPDPARRRRRVVLRKGRENYLCLLNFEDAAAGARGY NLVALGLIARWALASSDHDIAGGDLPGWFAELFGSGLLPQIADRRGECIHSACPHWKRCTIEHVIRRARGADLVIANHAL VMAQAVWGGLDDSSVPTRYVFDEGHHLFDAADSAFAAELSGASMAELRRWLLGAEGGRSRARGLARRLEDLVAADERLAA PLDALRAAARVLPGATMLARLGEPTAALDQIGPGAAEAFLTALAAQARARATAAERESNLDIEADLYPAEPELAAAASDL ARDLARLEAPLTSLRERLAARLDEEAGTIDSTERQRIEAAIRSLKRRALDPVASWRRMLAAVNEAPPEPGERPFHVLFIR QGRDIALLSHLLDPTEAFADAVASRAHGLLITSATLRDRTTAMDDVEQDAEWQRAESRTGATHLAAPAIRAAFASPFDYP AQTRIFIVRDNLRETPEALASAFRALFLASGGGALGLFTAIARLRAVHARIAPALDAANIPLFAQHVDAMNNATLVDSFR AEQNACLLGTDAMRDGVDIPGNALRLVVFERTPWPRPDILHRVRRTHLSHGDPKTYDDAIVRLRLRQGFGRLIRRAGDRG VFVLLDRAFPSRLESAFPTGVTVSRQGLAETVAAVREFFAADRASA >Mature_926_residues MDTPSRLILPAAPSLVTAHGRAALLDPDGELRHLTVAEARAALRDLPPPLVVHEAATLQRLDLSIPVLDLLDLFAFVMPA VTAAPTPSGLARALDFDPPATIEAAAALLPDIAIALLGRLDQSASLPMNRRAAGLAALMGEAGWPWAKPVAAALGQPAAR PDRAALRLGMILPEWQEEAPRPPPSSYPVPQDAARGRLADLLGGGAEQRPAQSDYASAATAAFAPPAAEGVPHCVLAEAG TGTGKTLGYLAPASLWAERNQGSVWISTYTRHLQRQIEQESARLEPDPARRRRRVVLRKGRENYLCLLNFEDAAAGARGY NLVALGLIARWALASSDHDIAGGDLPGWFAELFGSGLLPQIADRRGECIHSACPHWKRCTIEHVIRRARGADLVIANHAL VMAQAVWGGLDDSSVPTRYVFDEGHHLFDAADSAFAAELSGASMAELRRWLLGAEGGRSRARGLARRLEDLVAADERLAA PLDALRAAARVLPGATMLARLGEPTAALDQIGPGAAEAFLTALAAQARARATAAERESNLDIEADLYPAEPELAAAASDL ARDLARLEAPLTSLRERLAARLDEEAGTIDSTERQRIEAAIRSLKRRALDPVASWRRMLAAVNEAPPEPGERPFHVLFIR QGRDIALLSHLLDPTEAFADAVASRAHGLLITSATLRDRTTAMDDVEQDAEWQRAESRTGATHLAAPAIRAAFASPFDYP AQTRIFIVRDNLRETPEALASAFRALFLASGGGALGLFTAIARLRAVHARIAPALDAANIPLFAQHVDAMNNATLVDSFR AEQNACLLGTDAMRDGVDIPGNALRLVVFERTPWPRPDILHRVRRTHLSHGDPKTYDDAIVRLRLRQGFGRLIRRAGDRG VFVLLDRAFPSRLESAFPTGVTVSRQGLAETVAAVREFFAADRASA
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=261, Percent_Identity=32.183908045977, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR006054 - InterPro: IPR006310 - InterPro: IPR006055 - InterPro: IPR013520 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR006935 - InterPro: IPR012337 [H]
Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 99412; Mature: 99412
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTPSRLILPAAPSLVTAHGRAALLDPDGELRHLTVAEARAALRDLPPPLVVHEAATLQR CCCCCCEEECCCCCCEECCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEECHHHHHH LDLSIPVLDLLDLFAFVMPAVTAAPTPSGLARALDFDPPATIEAAAALLPDIAIALLGRL HCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC DQSASLPMNRRAAGLAALMGEAGWPWAKPVAAALGQPAARPDRAALRLGMILPEWQEEAP CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHCC RPPPSSYPVPQDAARGRLADLLGGGAEQRPAQSDYASAATAAFAPPAAEGVPHCVLAEAG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECC TGTGKTLGYLAPASLWAERNQGSVWISTYTRHLQRQIEQESARLEPDPARRRRRVVLRKG CCCCCCHHHHCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC RENYLCLLNFEDAAAGARGYNLVALGLIARWALASSDHDIAGGDLPGWFAELFGSGLLPQ CCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHH IADRRGECIHSACPHWKRCTIEHVIRRARGADLVIANHALVMAQAVWGGLDDSSVPTRYV HHHHCCHHHHHHCCCHHHCCHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEE FDEGHHLFDAADSAFAAELSGASMAELRRWLLGAEGGRSRARGLARRLEDLVAADERLAA ECCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC PLDALRAAARVLPGATMLARLGEPTAALDQIGPGAAEAFLTALAAQARARATAAERESNL HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DIEADLYPAEPELAAAASDLARDLARLEAPLTSLRERLAARLDEEAGTIDSTERQRIEAA CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IRSLKRRALDPVASWRRMLAAVNEAPPEPGERPFHVLFIRQGRDIALLSHLLDPTEAFAD HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHH AVASRAHGLLITSATLRDRTTAMDDVEQDAEWQRAESRTGATHLAAPAIRAAFASPFDYP HHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC AQTRIFIVRDNLRETPEALASAFRALFLASGGGALGLFTAIARLRAVHARIAPALDAANI CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PLFAQHVDAMNNATLVDSFRAEQNACLLGTDAMRDGVDIPGNALRLVVFERTPWPRPDIL CHHHHHHHHCCCCHHHHHHHCCCCCEEEECHHHHCCCCCCCCEEEEEEEECCCCCCHHHH HRVRRTHLSHGDPKTYDDAIVRLRLRQGFGRLIRRAGDRGVFVLLDRAFPSRLESAFPTG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCC VTVSRQGLAETVAAVREFFAADRASA CEECHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDTPSRLILPAAPSLVTAHGRAALLDPDGELRHLTVAEARAALRDLPPPLVVHEAATLQR CCCCCCEEECCCCCCEECCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEECHHHHHH LDLSIPVLDLLDLFAFVMPAVTAAPTPSGLARALDFDPPATIEAAAALLPDIAIALLGRL HCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC DQSASLPMNRRAAGLAALMGEAGWPWAKPVAAALGQPAARPDRAALRLGMILPEWQEEAP CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHCC RPPPSSYPVPQDAARGRLADLLGGGAEQRPAQSDYASAATAAFAPPAAEGVPHCVLAEAG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECC TGTGKTLGYLAPASLWAERNQGSVWISTYTRHLQRQIEQESARLEPDPARRRRRVVLRKG CCCCCCHHHHCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC RENYLCLLNFEDAAAGARGYNLVALGLIARWALASSDHDIAGGDLPGWFAELFGSGLLPQ CCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHH IADRRGECIHSACPHWKRCTIEHVIRRARGADLVIANHALVMAQAVWGGLDDSSVPTRYV HHHHCCHHHHHHCCCHHHCCHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEE FDEGHHLFDAADSAFAAELSGASMAELRRWLLGAEGGRSRARGLARRLEDLVAADERLAA ECCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC PLDALRAAARVLPGATMLARLGEPTAALDQIGPGAAEAFLTALAAQARARATAAERESNL HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DIEADLYPAEPELAAAASDLARDLARLEAPLTSLRERLAARLDEEAGTIDSTERQRIEAA CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IRSLKRRALDPVASWRRMLAAVNEAPPEPGERPFHVLFIRQGRDIALLSHLLDPTEAFAD HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHH AVASRAHGLLITSATLRDRTTAMDDVEQDAEWQRAESRTGATHLAAPAIRAAFASPFDYP HHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC AQTRIFIVRDNLRETPEALASAFRALFLASGGGALGLFTAIARLRAVHARIAPALDAANI CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PLFAQHVDAMNNATLVDSFRAEQNACLLGTDAMRDGVDIPGNALRLVVFERTPWPRPDIL CHHHHHHHHCCCCHHHHHHHCCCCCEEEECHHHHCCCCCCCCEEEEEEEECCCCCCHHHH HRVRRTHLSHGDPKTYDDAIVRLRLRQGFGRLIRRAGDRGVFVLLDRAFPSRLESAFPTG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCC VTVSRQGLAETVAAVREFFAADRASA CEECHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]