| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259508
Identifier: 148259508
GI number: 148259508
Start: 547074
End: 547769
Strand: Reverse
Name: 148259508
Synonym: Acry_0492
Alternate gene names: NA
Gene position: 547769-547074 (Counterclockwise)
Preceding gene: 148259510
Following gene: 148259507
Centisome position: 16.16
GC content: 68.97
Gene sequence:
>696_bases ATGTCCCCACCGCCATTTCGTATCCTCTTCGCCGTCTATCCGGGCATGACCCAGCTCGATTTCACGGGTCCGCACCAGTT CTTCATCCGCGCGCCGGGATGCGAGGTCATCGTCGCCAGTCGCGATGGCGGCGATGTGCCGAGCGACGGCCTCGTCTTCG CCCGCACCGCCCGCCTTGCGGACGTTCCCGGCTGTGACCTTCTCTGCGTGCCGGGCGGCACAAACGCGCTCGACGCGGCG CTGGACGACGGCTTTATCTCCGAACTCCGCCGACTTGCCGCCGATGCACGCTACATCACCTCGGTCTGCACCGGTTCGCT GATCCTCGGCGCCGCCGGGCTGTTGCGGGGGCGGCGCGCCGCGTGCCACTGGGCGTGGCGAGACCTGCTGAAGCCGTTCG GCGCAATTCCGGATGACGGCCGCGTGGTGCGCGATGGCAACGTCATCACCGGCGGCGGTGTGACCGCGGGAATTGATTTC GCGCTCGTGGTCCTCGCCGAGATTGCCGGTCCGCAGGTGGCGCAAACCCTCCAGCTGGGCTTCGAATACGCTCCCGCCCC ACCCTTCGAGGCTGGGCGCCCGGAACACGCGCCGCCTGACATCCTCGCGGTCTGCCGGCAGGGTCTCGCTCGGCTGGCTG CGACCCGCGAGGCCCAAACCCGCGAAGCAGCATCCCGCCTCGCCACGCAACATTGA
Upstream 100 bases:
>100_bases GGATGCCGATATGCCGGGCCATGGCCTGAAATGAGGGATCATGGTCATTTCGTCAATCGTGCCGTCATGGGACACTCGGT CGCATCATCGGAGATACCCC
Downstream 100 bases:
>100_bases CTCCGCTGAGGGTGTGAAGCTGTCGATCCTGATGACAACACCAGGCTAGCGGTGGCGCGTTGAACCAGGCCGAGAGACCG CGCAGGCAAGCGGCCTCCCG
Product: ThiJ/PfpI domain-containing protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; Transcriptional Regulator; AraC Family Transcriptional Regulator; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Hydratase; Cyclohexyl-Isocyanide Hydratase; ThiH/PfpI Family Amidotransferase; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; AraC Family Transcription Regulator Protein; Transcriptional Regulator ThiJ/PfpI Family Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLADVPGCDLLCVPGGTNALDAA LDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRAACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDF ALVVLAEIAGPQVAQTLQLGFEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH
Sequences:
>Translated_231_residues MSPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLADVPGCDLLCVPGGTNALDAA LDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRAACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDF ALVVLAEIAGPQVAQTLQLGFEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH >Mature_230_residues SPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLADVPGCDLLCVPGGTNALDAAL DDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRAACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDFA LVVLAEIAGPQVAQTLQLGFEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24340; Mature: 24209
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLA CCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHC DVPGCDLLCVPGGTNALDAALDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRA CCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDFALVVLAEIAGPQVAQTLQLG HHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHC FEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLA CCCCEEEEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHC DVPGCDLLCVPGGTNALDAALDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRA CCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDFALVVLAEIAGPQVAQTLQLG HHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHC FEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA