| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is paaK [H]
Identifier: 148259493
GI number: 148259493
Start: 530343
End: 531626
Strand: Reverse
Name: paaK [H]
Synonym: Acry_0477
Alternate gene names: 148259493
Gene position: 531626-530343 (Counterclockwise)
Preceding gene: 148259494
Following gene: 148259485
Centisome position: 15.69
GC content: 68.54
Gene sequence:
>1284_bases ATGGAGCGGGACGTCGAATTCGCCTCGCGTGACGAGGTTGTCGCGCTGCAGACGAGGCGGCTGAGGGAGGCGCTGCGCCA TGCCTATGAGCGCGTGCCATTCTATCGCTCGGCGTTCGATGCGGCGGGGGTGCGGCCGGAGGATTTGCAGCGGCCGGAGG ATCTGGCGCGGTTTCCGTTCACGGTGAAGGACGATCTGCGGCAGACCTATCCGTTCGGCATGTTCGCGGTGCCGCGCGGC GAGGTGTTGCGGCTGCACGCCTCGTCCGGGACAACGGGACGGCCGATCGTGGTGGGCTATACGCGGGCGGATCTCGATGT CTGGGCCGGGCTGGTCGCGCGGTCGATCCGGGCGGCGGGCGGACGGGCGGGCATGATGGTGCATGTCGCCTACGGCTATG GGCTGTTCACCGGCGGGCTCGGCGCGCATGCGGGCGCGGAGCGGCTCGGCTGCACGGTGGTGCCGGCCTCGGGCGGGATG ACCGAGCGGCAGGTGCAGTTGATCGCGGATTTCGGGCCCGAGATCATCATGGTGACGCCGAGCTACGCGCTCGCGATCCT CGACGAGTTCCGCCGCCAGGGGCGCGATCCGCGGGCGACAGCACTGCAATACGGAATTTTCGGCGCGGAACCCTGGACCA ATGCGATGCGCGCCGAGATCGAATCGGCGTTCGGCATCGAGGCGACCGATATCTACGGGCTTTCGGAGCTGATGGGGCCG GGGGTGGCGCAGGAATGCGTCGAGACCAAGGACGGGCTGCATCTCTGGGAGGACCATTTCTACCCCGAGATCATCGATCC GGCGACCGGCGCGGTGCTGCCGGATGGGAAGACCGGCGAGCTGGTGCTGACTGCGCTGAGCCACGAGGCGATGCCGATCA TCCGCTACCGGACACGCGACCTCACGCGGCTGCTGCCTGGTACGGCGCGGCCGGGGATGCGGCGGATGGAGAAGATCGGC GGGCGGGCGGACGACATGATCATTCTCCGCGGCGTGAACCTGTTTCCGAGCCAGATCGAGGAATTGCTGCTCGCCAACGA ATGGGGCAGCGGGCATTTCGTGATCGAGCTGACGCGGCCGCAGCGGCTGGACGAGATGACGGTGCGGGCCGAGTGCCGCC CCGAGCACTGGGACGGCGCCGGGCTCGCCGGCGAGGCCGCCGCCTTTGCGCATCACATCAAGGCGACGATCGGCGTCACA GCGCATGTGGTCATCGAACCGCCTGGGACTCTCGAGCGGTCGGTCGGCAAGGCAAAGCGGGTGCGCGACCTGCGGCCGAA ATGA
Upstream 100 bases:
>100_bases GATGTTTCGGTCAGCAACGATGACGGAATCGTCGCGGCGTTCCGCGGACAGTCGCGCACGATCGGCGGCTCGTGGCTCGA TGACAACGGAAGGTAGCGGG
Downstream 100 bases:
>100_bases TCAGGCGACGAGGTTGGCGGGGCTCCGCCCTGCCAGTACCTCCTCGATCCCGTCGAGCGCCAGCATGCCCATCGCAGTGC GGGTCTCGCGCGTGGCGCTG
Product: phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MERDVEFASRDEVVALQTRRLREALRHAYERVPFYRSAFDAAGVRPEDLQRPEDLARFPFTVKDDLRQTYPFGMFAVPRG EVLRLHASSGTTGRPIVVGYTRADLDVWAGLVARSIRAAGGRAGMMVHVAYGYGLFTGGLGAHAGAERLGCTVVPASGGM TERQVQLIADFGPEIIMVTPSYALAILDEFRRQGRDPRATALQYGIFGAEPWTNAMRAEIESAFGIEATDIYGLSELMGP GVAQECVETKDGLHLWEDHFYPEIIDPATGAVLPDGKTGELVLTALSHEAMPIIRYRTRDLTRLLPGTARPGMRRMEKIG GRADDMIILRGVNLFPSQIEELLLANEWGSGHFVIELTRPQRLDEMTVRAECRPEHWDGAGLAGEAAAFAHHIKATIGVT AHVVIEPPGTLERSVGKAKRVRDLRPK
Sequences:
>Translated_427_residues MERDVEFASRDEVVALQTRRLREALRHAYERVPFYRSAFDAAGVRPEDLQRPEDLARFPFTVKDDLRQTYPFGMFAVPRG EVLRLHASSGTTGRPIVVGYTRADLDVWAGLVARSIRAAGGRAGMMVHVAYGYGLFTGGLGAHAGAERLGCTVVPASGGM TERQVQLIADFGPEIIMVTPSYALAILDEFRRQGRDPRATALQYGIFGAEPWTNAMRAEIESAFGIEATDIYGLSELMGP GVAQECVETKDGLHLWEDHFYPEIIDPATGAVLPDGKTGELVLTALSHEAMPIIRYRTRDLTRLLPGTARPGMRRMEKIG GRADDMIILRGVNLFPSQIEELLLANEWGSGHFVIELTRPQRLDEMTVRAECRPEHWDGAGLAGEAAAFAHHIKATIGVT AHVVIEPPGTLERSVGKAKRVRDLRPK >Mature_427_residues MERDVEFASRDEVVALQTRRLREALRHAYERVPFYRSAFDAAGVRPEDLQRPEDLARFPFTVKDDLRQTYPFGMFAVPRG EVLRLHASSGTTGRPIVVGYTRADLDVWAGLVARSIRAAGGRAGMMVHVAYGYGLFTGGLGAHAGAERLGCTVVPASGGM TERQVQLIADFGPEIIMVTPSYALAILDEFRRQGRDPRATALQYGIFGAEPWTNAMRAEIESAFGIEATDIYGLSELMGP GVAQECVETKDGLHLWEDHFYPEIIDPATGAVLPDGKTGELVLTALSHEAMPIIRYRTRDLTRLLPGTARPGMRRMEKIG GRADDMIILRGVNLFPSQIEELLLANEWGSGHFVIELTRPQRLDEMTVRAECRPEHWDGAGLAGEAAAFAHHIKATIGVT AHVVIEPPGTLERSVGKAKRVRDLRPK
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=427, Percent_Identity=58.07962529274, Blast_Score=495, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 47006; Mature: 47006
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDVEFASRDEVVALQTRRLREALRHAYERVPFYRSAFDAAGVRPEDLQRPEDLARFPF CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCHHHHHCCC TVKDDLRQTYPFGMFAVPRGEVLRLHASSGTTGRPIVVGYTRADLDVWAGLVARSIRAAG CHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC GRAGMMVHVAYGYGLFTGGLGAHAGAERLGCTVVPASGGMTERQVQLIADFGPEIIMVTP CCCCEEEEEEECCHHHCCCCCCCCCHHHCCEEEEECCCCCCHHHHHHHCCCCCCEEEECC SYALAILDEFRRQGRDPRATALQYGIFGAEPWTNAMRAEIESAFGIEATDIYGLSELMGP HHHHHHHHHHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCC GVAQECVETKDGLHLWEDHFYPEIIDPATGAVLPDGKTGELVLTALSHEAMPIIRYRTRD CHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH LTRLLPGTARPGMRRMEKIGGRADDMIILRGVNLFPSQIEELLLANEWGSGHFVIELTRP HHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCC QRLDEMTVRAECRPEHWDGAGLAGEAAAFAHHIKATIGVTAHVVIEPPGTLERSVGKAKR CCCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHEECEEEEEEECCCCHHHHHHHHHHH VRDLRPK HHCCCCC >Mature Secondary Structure MERDVEFASRDEVVALQTRRLREALRHAYERVPFYRSAFDAAGVRPEDLQRPEDLARFPF CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCHHHHHCCC TVKDDLRQTYPFGMFAVPRGEVLRLHASSGTTGRPIVVGYTRADLDVWAGLVARSIRAAG CHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC GRAGMMVHVAYGYGLFTGGLGAHAGAERLGCTVVPASGGMTERQVQLIADFGPEIIMVTP CCCCEEEEEEECCHHHCCCCCCCCCHHHCCEEEEECCCCCCHHHHHHHCCCCCCEEEECC SYALAILDEFRRQGRDPRATALQYGIFGAEPWTNAMRAEIESAFGIEATDIYGLSELMGP HHHHHHHHHHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCC GVAQECVETKDGLHLWEDHFYPEIIDPATGAVLPDGKTGELVLTALSHEAMPIIRYRTRD CHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH LTRLLPGTARPGMRRMEKIGGRADDMIILRGVNLFPSQIEELLLANEWGSGHFVIELTRP HHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCC QRLDEMTVRAECRPEHWDGAGLAGEAAAFAHHIKATIGVTAHVVIEPPGTLERSVGKAKR CCCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHEECEEEEEEECCCCHHHHHHHHHHH VRDLRPK HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]