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The map label for this gene is rpsU

Identifier: 148259390

GI number: 148259390

Start: 426210

End: 426413

Strand: Reverse

Name: rpsU

Synonym: Acry_0373

Alternate gene names: 148259390

Gene position: 426413-426210 (Counterclockwise)

Preceding gene: 148259393

Following gene: 148259388

Centisome position: 12.58

GC content: 62.75

Gene sequence:

>204_bases
GTGCAAGTTCTCGTTCGTGACAACAATGTCGATCAGGCGCTGAAGGCGCTCAAGAAGAAGCTTCAGCGTGAAGGCGTGTT
CCGCGAGATGAAGTTGCGCCGGCACTACGAAAAGCCCTCCGAGCGCCGTGCCCGCGAGGCGGCCGAAGCCGTTCGCCGCG
CCCGCAAGATGGAGCGCAAGCGGATCGAGCGCGAAGGGTTCTGA

Upstream 100 bases:

>100_bases
CCGGCATGGGCGACGGCTGCGCCGGAAATGGTGCGGCTTTTTGGCGTTCATCTGCTAGACTAAACGCAAACCGTTCAACC
GTTCTGGAGTATCTGGCCAA

Downstream 100 bases:

>100_bases
TCGCTCCACGTGAGCGCGACGAGTCGGGGCGCGGCCTTTACGGGCACGCGCCCTTTGTCGTTTCAGCGCCGGTCCAGCGA
GAAGCGCCCCGGTCCGGCGG

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MQVLVRDNNVDQALKALKKKLQREGVFREMKLRRHYEKPSERRAREAAEAVRRARKMERKRIEREGF

Sequences:

>Translated_67_residues
MQVLVRDNNVDQALKALKKKLQREGVFREMKLRRHYEKPSERRAREAAEAVRRARKMERKRIEREGF
>Mature_67_residues
MQVLVRDNNVDQALKALKKKLQREGVFREMKLRRHYEKPSERRAREAAEAVRRARKMERKRIEREGF

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS21_ACICJ (A5FVG6)

Other databases:

- EMBL:   CP000697
- RefSeq:   YP_001233517.1
- ProteinModelPortal:   A5FVG6
- SMR:   A5FVG6
- STRING:   A5FVG6
- GeneID:   5159922
- GenomeReviews:   CP000697_GR
- KEGG:   acr:Acry_0373
- eggNOG:   COG0828
- HOGENOM:   HBG708268
- OMA:   EMKLRRH
- ProtClustDB:   PRK00270
- BioCyc:   ACRY349163:ACRY_0373-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00358
- InterPro:   IPR001911
- InterPro:   IPR018278
- PRINTS:   PR00976
- ProDom:   PD005521
- TIGRFAMs:   TIGR00030

Pfam domain/function: PF01165 Ribosomal_S21

EC number: NA

Molecular weight: Translated: 8194; Mature: 8194

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: PS01181 RIBOSOMAL_S21

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLVRDNNVDQALKALKKKLQREGVFREMKLRRHYEKPSERRAREAAEAVRRARKMERK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RIEREGF
HHHHCCC
>Mature Secondary Structure
MQVLVRDNNVDQALKALKKKLQREGVFREMKLRRHYEKPSERRAREAAEAVRRARKMERK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RIEREGF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA