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The map label for this gene is hoxK [H]

Identifier: 148259357

GI number: 148259357

Start: 387563

End: 388684

Strand: Reverse

Name: hoxK [H]

Synonym: Acry_0338

Alternate gene names: 148259357

Gene position: 388684-387563 (Counterclockwise)

Preceding gene: 148259360

Following gene: 148259356

Centisome position: 11.47

GC content: 66.76

Gene sequence:

>1122_bases
ATGCCGGACGAGTCGCGAACCTTCTATGAGCTGATGCGCGCGCAGGGAACCAGCCGCCGCTCGTTCCTGAAATTCTGCAG
CCTGACCGCCGCGGCACTCGGGCTCGACCCGATCTATGCGACGCGGATCGCGCATGCGATGGAGACCAAGCCGCGGATTC
CGGTGCTCTGGATGCATGGGCTGGAATGCACGTGCTGTTCGGAATCGTTCATCCGCTCGGGCCATCCGCTGGCGCGGGAT
GTGATCCTGAAGATGATCTCGCTCGATTACGACGACACGCTGATGGCGGCGGCCGGGCACCAGGCGGAGTCGATCCTCGA
TGAAATTCCGAGGAAGTACAAGGGCCGTTACATTCTGGCGGTGGAGGGCAACCCGCCGCTGAACGAGGACGGCATGTACT
GCATCGTCGGCGGCAAGCCCTTCGTCGAGAAGCTCAAGGCGGTGGCGGCGGATGCGATGGCGGTGATCGCCTGGGGGGCC
TGCGCCTCGTGGGGATGCGTGCAGGCGGCGCGGCCGAACCCGACCGCGGCGACGCCGATCGACAAGGTGATCACCGGCAA
GCCGATCATCAAGGTGCCGGGCTGCCCGCCGATCGCGGAGGTGATGACCGGCGTGATCACCTACATGGTGACGTTCGGGC
GGCTGCCGGAGCTGGACGCGCGGGGCCGGCCGCTGATGTTCTATGGTCAGCGGATCCACGACAAATGTTATCGGCGGCCG
CATTTCGACGCCGGCGAGTTCGTCGAGGCGTGGGACGACGAGGGGGCGCGCGAGGGCTATTGCCTCTACAAGATGGGCTG
CCGGGGGCCGACCACCTACAACGCCTGCTCGACGACGCGGTGGAATGGCGGCGTGTCGTTCCCGATCCAGTCCGGGCATG
GCTGCATCGGCTGCGCCGAGGACAATTTCTGGGATAATGGCCCGTTCTACCAGCGGCTTTCGCATATCGGCGCGGGATTC
GGCATCGAGGCGACGGCGGACGAGGTGGGCGCGGTGGTCGCGGGCGCCGCGGGGGCCGGCATTCTCGCGCATGCGGGGGC
GAGCGTGGTCAAGCACATGCGGGGCAAGCCGCCTTCCGACGATGCGGCACGACACAGCGGCGATGAAGGAGACAGGCCGT
GA

Upstream 100 bases:

>100_bases
AGGTTCGCTGTGCCGGCCGCAACATGACGTCATTATTGGGTCGAACAGAAAACACTTCGGCAGAACCAGCCCAGTGGCGC
CGGGGCGAGGAGGACCTGTC

Downstream 100 bases:

>100_bases
CCAGCGTCAGCACGCCGAACGGCTTCACGCTCGATGCGGGCGGCAAGCGCATGGTGGTCGATCCGGTGACGCGGATCGAG
GGGCACATGCGCTGCGAGGT

Product: hydrogenase (NiFe) small subunit HydA

Products: NA

Alternate protein names: Hydrogenlyase; Membrane-bound hydrogenase small subunit [H]

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPDESRTFYELMRAQGTSRRSFLKFCSLTAAALGLDPIYATRIAHAMETKPRIPVLWMHGLECTCCSESFIRSGHPLARD
VILKMISLDYDDTLMAAAGHQAESILDEIPRKYKGRYILAVEGNPPLNEDGMYCIVGGKPFVEKLKAVAADAMAVIAWGA
CASWGCVQAARPNPTAATPIDKVITGKPIIKVPGCPPIAEVMTGVITYMVTFGRLPELDARGRPLMFYGQRIHDKCYRRP
HFDAGEFVEAWDDEGAREGYCLYKMGCRGPTTYNACSTTRWNGGVSFPIQSGHGCIGCAEDNFWDNGPFYQRLSHIGAGF
GIEATADEVGAVVAGAAGAGILAHAGASVVKHMRGKPPSDDAARHSGDEGDRP

Sequences:

>Translated_373_residues
MPDESRTFYELMRAQGTSRRSFLKFCSLTAAALGLDPIYATRIAHAMETKPRIPVLWMHGLECTCCSESFIRSGHPLARD
VILKMISLDYDDTLMAAAGHQAESILDEIPRKYKGRYILAVEGNPPLNEDGMYCIVGGKPFVEKLKAVAADAMAVIAWGA
CASWGCVQAARPNPTAATPIDKVITGKPIIKVPGCPPIAEVMTGVITYMVTFGRLPELDARGRPLMFYGQRIHDKCYRRP
HFDAGEFVEAWDDEGAREGYCLYKMGCRGPTTYNACSTTRWNGGVSFPIQSGHGCIGCAEDNFWDNGPFYQRLSHIGAGF
GIEATADEVGAVVAGAAGAGILAHAGASVVKHMRGKPPSDDAARHSGDEGDRP
>Mature_372_residues
PDESRTFYELMRAQGTSRRSFLKFCSLTAAALGLDPIYATRIAHAMETKPRIPVLWMHGLECTCCSESFIRSGHPLARDV
ILKMISLDYDDTLMAAAGHQAESILDEIPRKYKGRYILAVEGNPPLNEDGMYCIVGGKPFVEKLKAVAADAMAVIAWGAC
ASWGCVQAARPNPTAATPIDKVITGKPIIKVPGCPPIAEVMTGVITYMVTFGRLPELDARGRPLMFYGQRIHDKCYRRPH
FDAGEFVEAWDDEGAREGYCLYKMGCRGPTTYNACSTTRWNGGVSFPIQSGHGCIGCAEDNFWDNGPFYQRLSHIGAGFG
IEATADEVGAVVAGAAGAGILAHAGASVVKHMRGKPPSDDAARHSGDEGDRP

Specific function: This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions [H]

COG id: COG1740

COG function: function code C; Ni,Fe-hydrogenase I small subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

Organism=Escherichia coli, GI1787206, Length=333, Percent_Identity=71.4714714714715, Blast_Score=504, Evalue=1e-144,
Organism=Escherichia coli, GI1789371, Length=293, Percent_Identity=44.0273037542662, Blast_Score=270, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137
- InterPro:   IPR001821
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: =1.12.99.6 [H]

Molecular weight: Translated: 40352; Mature: 40220

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDESRTFYELMRAQGTSRRSFLKFCSLTAAALGLDPIYATRIAHAMETKPRIPVLWMHG
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECC
LECTCCSESFIRSGHPLARDVILKMISLDYDDTLMAAAGHQAESILDEIPRKYKGRYILA
CCEEECCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEE
VEGNPPLNEDGMYCIVGGKPFVEKLKAVAADAMAVIAWGACASWGCVQAARPNPTAATPI
ECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
DKVITGKPIIKVPGCPPIAEVMTGVITYMVTFGRLPELDARGRPLMFYGQRIHDKCYRRP
HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHCCC
HFDAGEFVEAWDDEGAREGYCLYKMGCRGPTTYNACSTTRWNGGVSFPIQSGHGCIGCAE
CCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECEEECCCCEEEECC
DNFWDNGPFYQRLSHIGAGFGIEATADEVGAVVAGAAGAGILAHAGASVVKHMRGKPPSD
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
DAARHSGDEGDRP
HHHHCCCCCCCCC
>Mature Secondary Structure 
PDESRTFYELMRAQGTSRRSFLKFCSLTAAALGLDPIYATRIAHAMETKPRIPVLWMHG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECC
LECTCCSESFIRSGHPLARDVILKMISLDYDDTLMAAAGHQAESILDEIPRKYKGRYILA
CCEEECCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEE
VEGNPPLNEDGMYCIVGGKPFVEKLKAVAADAMAVIAWGACASWGCVQAARPNPTAATPI
ECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
DKVITGKPIIKVPGCPPIAEVMTGVITYMVTFGRLPELDARGRPLMFYGQRIHDKCYRRP
HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHCCC
HFDAGEFVEAWDDEGAREGYCLYKMGCRGPTTYNACSTTRWNGGVSFPIQSGHGCIGCAE
CCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECEEECCCCEEEECC
DNFWDNGPFYQRLSHIGAGFGIEATADEVGAVVAGAAGAGILAHAGASVVKHMRGKPPSD
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
DAARHSGDEGDRP
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488; 2493816 [H]