| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259320
Identifier: 148259320
GI number: 148259320
Start: 347592
End: 349955
Strand: Reverse
Name: 148259320
Synonym: Acry_0301
Alternate gene names: NA
Gene position: 349955-347592 (Counterclockwise)
Preceding gene: 148259321
Following gene: 148259319
Centisome position: 10.33
GC content: 71.53
Gene sequence:
>2364_bases GTGTCGAGCCTCGACCGCAAGCTGCTGCGCGATCTGTGGCGGCTGCGCCTGCAGGCGCTGGCGATCGCGCTGGTGATCGC CTCCGGCGTCGCGCTGATGGTGATGGCGCTGACCACGACCGAATCGCTGGAGGCGACGACCAGCGCCTATTACGAGCGCG CGCGCTTCGCCGATGTGTTCGCCCGGCTGAAGCGCGCGCCGGACTCGCTGGAGGCGCGGATCGCCGCGATTCCGGGCGTG CGGGTGGTGGAGACGCGAATCGTCGAGTCCGGTCTGCTGGATGTCGCGGGGTATCGCGAGCCGGTGGTGGCGACTCTGGT CTCGCTGCCGAAATCCGGCCCGCAGCGGCTCAACGCGCTGGTCCTGCGCGCGGGCCGGCTGCCGGCGCCTGGCCGGCTGC GCGAGGCGGTGGTCGGCGAACCCTTCGCCGAGGCGCATCACCTGCGGCCGGGCGATACGATCGGCGCGGTGCTGCGCGGC CGGCGCGTGGCGCTGCGCATCGTCGGCACCGCGCTCAGCCCGGAATTCGTCTATGCGATTCCGCCCGGCGGGCTGATGCC GGATGACCGGCGGTTCGGCGTGATCTGGATGGGGCGCGACGAGCTTGCCGCCGCCTTCGGCCTGAAGGGCGCGTTCGACG ATGTCTCGCTCGCGCTCTCTCCCGGCCAGCGCCCGCAGCCGGTGATCGCCCGGCTCGACGCGCTGCTCGCCCGTTATGGC GGCACCGGCGCCTATGACCGCGCCGAACAGGTCTCGAACTGGTTCCTGAGCAACGAGATCGCGCAGCAGAAGAACATGTC GCGGCTGATGCCGGCGATCTTTCTCGGCGTCGCCGCCTTCCTCACCAACATGGTGATGGCGCGGCTGGTCGCGACCGAGC GGCGGGAGATCGGCCTGCTCAAGGCGTTCGGCTATGGCGGCGGGGCGATCTTCTGGCATTACGCGAAGCTGGTGCTCGCC ATCGCCGCCGGCGGCATCGTGCTGGGCGCGGTGCTCGGCGCCGCGCTCGGCAACTGGAACACCAGGCTCTATCGCGAGTT CTTCCGCTTTCCGTTCCTGCTCTACCAGCCGGGGCCACGGAGTTTCGCGATCGCCGCCGCGGTGAGCCTGGCCACCTCGC TCGCCGGCGGCATGGGGGCGGTGGGCCGCGCCGCGCGGCTGCCGCCGGCGATCGCGATGCAGCCGGCGCCGCCGGCGGTC TATCGGCGGTCTCGCCTCGGCCCGGCGGCGCTGGGGCGGTTCCTCGACGGGCCGAGCCGGATGATCGTCCGCCGCCTGCT GCGCTGGCCGCTGCGCGCCTTCCTGGCGAGCGCCGGCCTCGCGCTCTCGGTCGGCGTGCTGATCCTCGCGCTGCAATGGG TCGATGCGGTGAACGCGCTGGTCGAGACGCATTACGAGCGCGGCCAGCGGCAGGACGCGACGATCACCTTCAACGACCTG CGGCCGCGCGGCGTTCTCGACGATATCCGGCATCTGCCGGGCGTGCTGGCGGCGGAGCCGTTCCGCATCGTGCCGGCGCG GCTCGCGCGCGGCCGGGCCGAACAGCGCGAACCGGTGATCGGCGTGCCGGCCGGCGCGCGCCTCGCCCCGGTGCACGACG TGGCGCGGGGGCCGATCGACATGCCGGCGGACGGGCTGGTGCTGTCGCGCCAGCTGGCGGGGCTGCTGCATGCCGGCATC GGCGATCCGGTCCGCGTGCAGTTGCTCGAAGGGCGGCGCGCGGTGCTGATGGTTCCGGTCGTCCGGCTGTTCGACACCTA TATCGGCAAGCCGGCCTACATGAACCTTGCCGCGCTCAACCGGCGGATGGGCGATGGCAGCGTGCTGTCCGGCGTTCATG TCACGCTCGATGAACCACGGCGCGCGGCGTTTCTCGCCCGGCTGCGGACCCTGCCGGGGATTGCCGCGATCCAGTTCCGC CGGGCGGCGATCGACACGTTCCACCGGACGATGGGCGAGACCATCGACATCTTCCTTGGTTTCTTCATCGGGTTCGCCTC GGCGCTGTCGGTCGGGGTGATCGTCAACGCGATCCGCATCGCGCTGTCGGAGCGCGAGCGCGAACTGGCGACGCTGCGGG TGCTCGGCTTCAGCCGCGCCGAGGTGGCCTATATCCTGCTCGGCGAGATCGAGCTGCTGGTCTGGATCGCCATTCCGCTC GGCTGCGGGGCGGGGACGCTGCTCGCCTGGTATTTCGGCAAGGCGTTCGAGACCGAGCTGTTCCGGGTGCCGCCGGTGAT CTACCCGTCGACCTACGGCACCGCGGCGCTGATCATGATCGCGACGGCGGCGATTGTCGCCGCCTGGCTGCGGCGGCACC TCGACCGGCTGGACATGATCGCCGTGCTGAAGACGCGGGAGTAG
Upstream 100 bases:
>100_bases CATCGCCGACCGCGTGCTGAGCTTTGCCGACGGGCGGATCGTCGGCACGCGGGTCAACCCGGTCCGGCACAGCCCGGCCG GGCTGGTGTGGTAGCGCTCG
Downstream 100 bases:
>100_bases GAACCCATGCGCCCCTTCGTCCGGCGGATCGTGATCTGGGGCGTGCTGGCCGCGGCGGTCGGCGCCGGGATCGTCTACAG TTTCCGCCCGCGGCCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Efflux ABC Transporter Permease Protein; Permease; Peptide ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; Permease Domain-Containing Protein; ABC-Type Antimicrobial Peptide Transport System Protein; ABC-Type Transporter; ABC-Type Transport System Permease; ABC Transporter Permease; ABC Transporter; Permease Of ABC Transporter System
Number of amino acids: Translated: 787; Mature: 786
Protein sequence:
>787_residues MSSLDRKLLRDLWRLRLQALAIALVIASGVALMVMALTTTESLEATTSAYYERARFADVFARLKRAPDSLEARIAAIPGV RVVETRIVESGLLDVAGYREPVVATLVSLPKSGPQRLNALVLRAGRLPAPGRLREAVVGEPFAEAHHLRPGDTIGAVLRG RRVALRIVGTALSPEFVYAIPPGGLMPDDRRFGVIWMGRDELAAAFGLKGAFDDVSLALSPGQRPQPVIARLDALLARYG GTGAYDRAEQVSNWFLSNEIAQQKNMSRLMPAIFLGVAAFLTNMVMARLVATERREIGLLKAFGYGGGAIFWHYAKLVLA IAAGGIVLGAVLGAALGNWNTRLYREFFRFPFLLYQPGPRSFAIAAAVSLATSLAGGMGAVGRAARLPPAIAMQPAPPAV YRRSRLGPAALGRFLDGPSRMIVRRLLRWPLRAFLASAGLALSVGVLILALQWVDAVNALVETHYERGQRQDATITFNDL RPRGVLDDIRHLPGVLAAEPFRIVPARLARGRAEQREPVIGVPAGARLAPVHDVARGPIDMPADGLVLSRQLAGLLHAGI GDPVRVQLLEGRRAVLMVPVVRLFDTYIGKPAYMNLAALNRRMGDGSVLSGVHVTLDEPRRAAFLARLRTLPGIAAIQFR RAAIDTFHRTMGETIDIFLGFFIGFASALSVGVIVNAIRIALSERERELATLRVLGFSRAEVAYILLGEIELLVWIAIPL GCGAGTLLAWYFGKAFETELFRVPPVIYPSTYGTAALIMIATAAIVAAWLRRHLDRLDMIAVLKTRE
Sequences:
>Translated_787_residues MSSLDRKLLRDLWRLRLQALAIALVIASGVALMVMALTTTESLEATTSAYYERARFADVFARLKRAPDSLEARIAAIPGV RVVETRIVESGLLDVAGYREPVVATLVSLPKSGPQRLNALVLRAGRLPAPGRLREAVVGEPFAEAHHLRPGDTIGAVLRG RRVALRIVGTALSPEFVYAIPPGGLMPDDRRFGVIWMGRDELAAAFGLKGAFDDVSLALSPGQRPQPVIARLDALLARYG GTGAYDRAEQVSNWFLSNEIAQQKNMSRLMPAIFLGVAAFLTNMVMARLVATERREIGLLKAFGYGGGAIFWHYAKLVLA IAAGGIVLGAVLGAALGNWNTRLYREFFRFPFLLYQPGPRSFAIAAAVSLATSLAGGMGAVGRAARLPPAIAMQPAPPAV YRRSRLGPAALGRFLDGPSRMIVRRLLRWPLRAFLASAGLALSVGVLILALQWVDAVNALVETHYERGQRQDATITFNDL RPRGVLDDIRHLPGVLAAEPFRIVPARLARGRAEQREPVIGVPAGARLAPVHDVARGPIDMPADGLVLSRQLAGLLHAGI GDPVRVQLLEGRRAVLMVPVVRLFDTYIGKPAYMNLAALNRRMGDGSVLSGVHVTLDEPRRAAFLARLRTLPGIAAIQFR RAAIDTFHRTMGETIDIFLGFFIGFASALSVGVIVNAIRIALSERERELATLRVLGFSRAEVAYILLGEIELLVWIAIPL GCGAGTLLAWYFGKAFETELFRVPPVIYPSTYGTAALIMIATAAIVAAWLRRHLDRLDMIAVLKTRE >Mature_786_residues SSLDRKLLRDLWRLRLQALAIALVIASGVALMVMALTTTESLEATTSAYYERARFADVFARLKRAPDSLEARIAAIPGVR VVETRIVESGLLDVAGYREPVVATLVSLPKSGPQRLNALVLRAGRLPAPGRLREAVVGEPFAEAHHLRPGDTIGAVLRGR RVALRIVGTALSPEFVYAIPPGGLMPDDRRFGVIWMGRDELAAAFGLKGAFDDVSLALSPGQRPQPVIARLDALLARYGG TGAYDRAEQVSNWFLSNEIAQQKNMSRLMPAIFLGVAAFLTNMVMARLVATERREIGLLKAFGYGGGAIFWHYAKLVLAI AAGGIVLGAVLGAALGNWNTRLYREFFRFPFLLYQPGPRSFAIAAAVSLATSLAGGMGAVGRAARLPPAIAMQPAPPAVY RRSRLGPAALGRFLDGPSRMIVRRLLRWPLRAFLASAGLALSVGVLILALQWVDAVNALVETHYERGQRQDATITFNDLR PRGVLDDIRHLPGVLAAEPFRIVPARLARGRAEQREPVIGVPAGARLAPVHDVARGPIDMPADGLVLSRQLAGLLHAGIG DPVRVQLLEGRRAVLMVPVVRLFDTYIGKPAYMNLAALNRRMGDGSVLSGVHVTLDEPRRAAFLARLRTLPGIAAIQFRR AAIDTFHRTMGETIDIFLGFFIGFASALSVGVIVNAIRIALSERERELATLRVLGFSRAEVAYILLGEIELLVWIAIPLG CGAGTLLAWYFGKAFETELFRVPPVIYPSTYGTAALIMIATAAIVAAWLRRHLDRLDMIAVLKTRE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85317; Mature: 85185
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLDRKLLRDLWRLRLQALAIALVIASGVALMVMALTTTESLEATTSAYYERARFADVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ARLKRAPDSLEARIAAIPGVRVVETRIVESGLLDVAGYREPVVATLVSLPKSGPQRLNAL HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCHHHHHHH VLRAGRLPAPGRLREAVVGEPFAEAHHLRPGDTIGAVLRGRRVALRIVGTALSPEFVYAI HHHCCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCEEEEEEEECCCCCCEEEEE PPGGLMPDDRRFGVIWMGRDELAAAFGLKGAFDDVSLALSPGQRPQPVIARLDALLARYG CCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC GTGAYDRAEQVSNWFLSNEIAQQKNMSRLMPAIFLGVAAFLTNMVMARLVATERREIGLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH KAFGYGGGAIFWHYAKLVLAIAAGGIVLGAVLGAALGNWNTRLYREFFRFPFLLYQPGPR EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCC SFAIAAAVSLATSLAGGMGAVGRAARLPPAIAMQPAPPAVYRRSRLGPAALGRFLDGPSR CHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHH MIVRRLLRWPLRAFLASAGLALSVGVLILALQWVDAVNALVETHYERGQRQDATITFNDL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC RPRGVLDDIRHLPGVLAAEPFRIVPARLARGRAEQREPVIGVPAGARLAPVHDVARGPID CCCCHHHHHHHCCCHHCCCCHHHHHHHHHCCCCHHCCCEEECCCCCCCCCHHHHHCCCCC MPADGLVLSRQLAGLLHAGIGDPVRVQLLEGRRAVLMVPVVRLFDTYIGKPAYMNLAALN CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHH RRMGDGSVLSGVHVTLDEPRRAAFLARLRTLPGIAAIQFRRAAIDTFHRTMGETIDIFLG CCCCCCCEECCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFIGFASALSVGVIVNAIRIALSERERELATLRVLGFSRAEVAYILLGEIELLVWIAIPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHC GCGAGTLLAWYFGKAFETELFRVPPVIYPSTYGTAALIMIATAAIVAAWLRRHLDRLDMI CCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLKTRE HHHCCCC >Mature Secondary Structure SSLDRKLLRDLWRLRLQALAIALVIASGVALMVMALTTTESLEATTSAYYERARFADVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ARLKRAPDSLEARIAAIPGVRVVETRIVESGLLDVAGYREPVVATLVSLPKSGPQRLNAL HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCHHHHHHH VLRAGRLPAPGRLREAVVGEPFAEAHHLRPGDTIGAVLRGRRVALRIVGTALSPEFVYAI HHHCCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCEEEEEEEECCCCCCEEEEE PPGGLMPDDRRFGVIWMGRDELAAAFGLKGAFDDVSLALSPGQRPQPVIARLDALLARYG CCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC GTGAYDRAEQVSNWFLSNEIAQQKNMSRLMPAIFLGVAAFLTNMVMARLVATERREIGLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH KAFGYGGGAIFWHYAKLVLAIAAGGIVLGAVLGAALGNWNTRLYREFFRFPFLLYQPGPR EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCC SFAIAAAVSLATSLAGGMGAVGRAARLPPAIAMQPAPPAVYRRSRLGPAALGRFLDGPSR CHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHH MIVRRLLRWPLRAFLASAGLALSVGVLILALQWVDAVNALVETHYERGQRQDATITFNDL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC RPRGVLDDIRHLPGVLAAEPFRIVPARLARGRAEQREPVIGVPAGARLAPVHDVARGPID CCCCHHHHHHHCCCHHCCCCHHHHHHHHHCCCCHHCCCEEECCCCCCCCCHHHHHCCCCC MPADGLVLSRQLAGLLHAGIGDPVRVQLLEGRRAVLMVPVVRLFDTYIGKPAYMNLAALN CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHH RRMGDGSVLSGVHVTLDEPRRAAFLARLRTLPGIAAIQFRRAAIDTFHRTMGETIDIFLG CCCCCCCEECCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFIGFASALSVGVIVNAIRIALSERERELATLRVLGFSRAEVAYILLGEIELLVWIAIPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHC GCGAGTLLAWYFGKAFETELFRVPPVIYPSTYGTAALIMIATAAIVAAWLRRHLDRLDMI CCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLKTRE HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA