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The map label for this gene is ybjY [C]

Identifier: 148259319

GI number: 148259319

Start: 346362

End: 347585

Strand: Reverse

Name: ybjY [C]

Synonym: Acry_0300

Alternate gene names: 148259319

Gene position: 347585-346362 (Counterclockwise)

Preceding gene: 148259320

Following gene: 148259313

Centisome position: 10.26

GC content: 75.9

Gene sequence:

>1224_bases
ATGCGCCCCTTCGTCCGGCGGATCGTGATCTGGGGCGTGCTGGCCGCGGCGGTCGGCGCCGGGATCGTCTACAGTTTCCG
CCCGCGGCCGGTGGCGGTGGATGTCGCCACCGTTGCCAGAGGCATGCTGCGCGTGACCATCGACGATGACGGCGAGACCA
GGGTGCGCCACGTCTACACGCTGCAGGCGCCGCTGACCGGGGATCTCGACCGGATCACCGCCGATCCGGGCGACCCGGTG
ACCGCGGGACGGACGGTGCTGGCGCGGATCGTGCCGGCGCCGCCCTCGATGCTCGATACCCGCACGATGGCGGAGCGGGA
GGCCGCGGTGGGCGCGGCGCTGGCGGCGAAGGCGCAGGCGGCGGCCGAGCGGGACCGGGCGGAGACGACGCTGGTCTTCG
CCCGCACCGAGCGCGACCGCGCCCGGCGGCTGCTGCCGCGGCGGGCGATTTCGCAGCGCGAGGCGGACGATGCCGAGCGG
GCCTTCCGCGCGGCGGAGGCCGGCCTCGCCGCGGCGCGGGCGGCGCTCGAACTGCGCGACCAGGAACTCGCCGCCGCCCG
CGCGCGCCTGCTGCCCCGCGACGCCGCGCGCCGCGCGGCGCCGGCCGGCGAGGTGGTGCGGGTGACGGCGCCGGTCAGCG
GCGTGGTGCTGCGGGTGATCCGGCGCAGCGCCGGCATCGTCGCGGCGGGGGCGGCGCTGCTCGATATCGGCGATCCGCAC
CAGCTCGAGATCGTCATCGATCCGCTCTCGGAGGATGCGGTGAGGATGCGCCAGGGCGAGGCGGCGATCGTCACCGGCTG
GGGTGGGTCGGACCTGCACGCGGTGATCCGCCGGATCGATCCGGTCGGGCGGATGAAGGTCTCGGCGCTGGGGATCGAGG
AGCAGCGCGTCGATGTCGTGCTCGACCTCACCGATCCGCCCGCGCGCTGGCAGGCGCTCGGCGACGGGTATCGGGTCGAT
GTGCACGTGATCACGTTCCAGGGCGATGTGCTGCGGGTGCCGCTCGGCGCGCTGGTGCGGATGGGGGATGGCTGGGCGGT
GTACGTCGATGACCGTGGCGTGGCGCGGCGGCGGGCGGTGACGGTCGGCGCGCGCGGCGGGCTTGAGGCCGAGATCCGCG
CGGGGCTCGCGCCGGGGCAGCGCGTGGTGCTCTATCCGGGTGAGCGGATCCGCGACGGCACGCGCATCGCAATCCGCCCC
GCCGGCGCGGAGGACGGGTCGTGA

Upstream 100 bases:

>100_bases
GATCATGATCGCGACGGCGGCGATTGTCGCCGCCTGGCTGCGGCGGCACCTCGACCGGCTGGACATGATCGCCGTGCTGA
AGACGCGGGAGTAGGAACCC

Downstream 100 bases:

>100_bases
CTATCCGCTGAACGGAAACAGGTGCAGCCGGTCGGCCGCGACACGCAGGGCGACGGCGCCGCGCGGCGGCGGGGCCGCGC
ACTGAACCGGAACCGGCGCG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane Fusion Protein AcrA; Membrane Fusion Protein

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRPFVRRIVIWGVLAAAVGAGIVYSFRPRPVAVDVATVARGMLRVTIDDDGETRVRHVYTLQAPLTGDLDRITADPGDPV
TAGRTVLARIVPAPPSMLDTRTMAEREAAVGAALAAKAQAAAERDRAETTLVFARTERDRARRLLPRRAISQREADDAER
AFRAAEAGLAAARAALELRDQELAAARARLLPRDAARRAAPAGEVVRVTAPVSGVVLRVIRRSAGIVAAGAALLDIGDPH
QLEIVIDPLSEDAVRMRQGEAAIVTGWGGSDLHAVIRRIDPVGRMKVSALGIEEQRVDVVLDLTDPPARWQALGDGYRVD
VHVITFQGDVLRVPLGALVRMGDGWAVYVDDRGVARRRAVTVGARGGLEAEIRAGLAPGQRVVLYPGERIRDGTRIAIRP
AGAEDGS

Sequences:

>Translated_407_residues
MRPFVRRIVIWGVLAAAVGAGIVYSFRPRPVAVDVATVARGMLRVTIDDDGETRVRHVYTLQAPLTGDLDRITADPGDPV
TAGRTVLARIVPAPPSMLDTRTMAEREAAVGAALAAKAQAAAERDRAETTLVFARTERDRARRLLPRRAISQREADDAER
AFRAAEAGLAAARAALELRDQELAAARARLLPRDAARRAAPAGEVVRVTAPVSGVVLRVIRRSAGIVAAGAALLDIGDPH
QLEIVIDPLSEDAVRMRQGEAAIVTGWGGSDLHAVIRRIDPVGRMKVSALGIEEQRVDVVLDLTDPPARWQALGDGYRVD
VHVITFQGDVLRVPLGALVRMGDGWAVYVDDRGVARRRAVTVGARGGLEAEIRAGLAPGQRVVLYPGERIRDGTRIAIRP
AGAEDGS
>Mature_407_residues
MRPFVRRIVIWGVLAAAVGAGIVYSFRPRPVAVDVATVARGMLRVTIDDDGETRVRHVYTLQAPLTGDLDRITADPGDPV
TAGRTVLARIVPAPPSMLDTRTMAEREAAVGAALAAKAQAAAERDRAETTLVFARTERDRARRLLPRRAISQREADDAER
AFRAAEAGLAAARAALELRDQELAAARARLLPRDAARRAAPAGEVVRVTAPVSGVVLRVIRRSAGIVAAGAALLDIGDPH
QLEIVIDPLSEDAVRMRQGEAAIVTGWGGSDLHAVIRRIDPVGRMKVSALGIEEQRVDVVLDLTDPPARWQALGDGYRVD
VHVITFQGDVLRVPLGALVRMGDGWAVYVDDRGVARRRAVTVGARGGLEAEIRAGLAPGQRVVLYPGERIRDGTRIAIRP
AGAEDGS

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43542; Mature: 43542

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFVRRIVIWGVLAAAVGAGIVYSFRPRPVAVDVATVARGMLRVTIDDDGETRVRHVYT
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHCCCEEEEEECCCCCCEEEEEEE
LQAPLTGDLDRITADPGDPVTAGRTVLARIVPAPPSMLDTRTMAEREAAVGAALAAKAQA
EECCCCCCCHHCCCCCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAERDRAETTLVFARTERDRARRLLPRRAISQREADDAERAFRAAEAGLAAARAALELRD
HHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QELAAARARLLPRDAARRAAPAGEVVRVTAPVSGVVLRVIRRSAGIVAAGAALLDIGDPH
HHHHHHHHHHCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCEEEECEEEEECCCCC
QLEIVIDPLSEDAVRMRQGEAAIVTGWGGSDLHAVIRRIDPVGRMKVSALGIEEQRVDVV
EEEEEEECCCCHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEE
LDLTDPPARWQALGDGYRVDVHVITFQGDVLRVPLGALVRMGDGWAVYVDDRGVARRRAV
EECCCCCHHHHHCCCCEEEEEEEEEEECCEEEECHHHHEEECCCEEEEECCCCCCCCEEE
TVGARGGLEAEIRAGLAPGQRVVLYPGERIRDGTRIAIRPAGAEDGS
EEECCCCCCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRPFVRRIVIWGVLAAAVGAGIVYSFRPRPVAVDVATVARGMLRVTIDDDGETRVRHVYT
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHCCCEEEEEECCCCCCEEEEEEE
LQAPLTGDLDRITADPGDPVTAGRTVLARIVPAPPSMLDTRTMAEREAAVGAALAAKAQA
EECCCCCCCHHCCCCCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAERDRAETTLVFARTERDRARRLLPRRAISQREADDAERAFRAAEAGLAAARAALELRD
HHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QELAAARARLLPRDAARRAAPAGEVVRVTAPVSGVVLRVIRRSAGIVAAGAALLDIGDPH
HHHHHHHHHHCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCEEEECEEEEECCCCC
QLEIVIDPLSEDAVRMRQGEAAIVTGWGGSDLHAVIRRIDPVGRMKVSALGIEEQRVDVV
EEEEEEECCCCHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEE
LDLTDPPARWQALGDGYRVDVHVITFQGDVLRVPLGALVRMGDGWAVYVDDRGVARRRAV
EECCCCCHHHHHCCCCEEEEEEEEEEECCEEEECHHHHEEECCCEEEEECCCCCCCCEEE
TVGARGGLEAEIRAGLAPGQRVVLYPGERIRDGTRIAIRPAGAEDGS
EEECCCCCCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA