| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148259278
Identifier: 148259278
GI number: 148259278
Start: 297444
End: 299324
Strand: Reverse
Name: 148259278
Synonym: Acry_0258
Alternate gene names: NA
Gene position: 299324-297444 (Counterclockwise)
Preceding gene: 148259281
Following gene: 148259277
Centisome position: 8.83
GC content: 75.23
Gene sequence:
>1881_bases ATGAGCGCCGCATCGCCCTCTCCGGCTCCCCGCCCCGATCCCGCTCCGTGTGCCTGCGGGTCCGGGCTGCGGGCGCGGCG GTGCTGCGCGCTCGATGGCGGCGGACCGCCGGACCCCGCCCATCACGCACTGGTCGCGCCGCAAGTGGAGCAGGCGCGCG CGGCGCGGACCGCCGGGCGCAACCGCGAGGCCGAACGCCTGCTGCTGCAGGTGCTCGATCTCGCCCCGCTGCATCGCGAG GCGCTGCGCCTGCTCTACGAGATTCGCCACGCCGAGCGGCGGATTCCGGCGGCCATCGCCCTCGTTGCGCGCATCGCCGC GCTGCCGCCGGAGACGCCGGCGGCGCACGTCCAGCACGCCCAGCTCCTGATCGGGCAGGGCCGCCACGCCGAGGCCGAGG CGCCGGCGCGACGCGCACTGCTGCTCGCCCCGCGCGACCCGTCGGTGCATCACCTGCTCGGCATGATCCAGACCGAAACC GGCCGCCCGACCTCCGGCGAGCGGCATTACCGCATGGCCGAGGCGCTGATCGAGGCGCCGAACCCGACGCTGCTTGGCAA TCTCGCCTGGAATCTGCGCCAGCAGGGCCGGCTCGACGAGGCGGCGGCGGTCTACGGGCAGGCGTTGTCCGGCCCTGCCC GGCCGGTGCGCGCTCTGGCCGGGCTGGCGCAGGTCGAGGCCGGGCGCGGCCGTTTCGACGCGGCGGAAGCGCTGCTGGCC GAAGCCGGGACGTCCGCCGCCGCCCCGGGCGACCGCATGGTCGCGGCCCTGATCGCGCTGTCCCGGCTGCGTGCGGGCGA TGCCGAGGCCGCGCTCGACCGCATCGCCGCCACCGAGGCGGCAATCGCGCCGCAACCGCTGCTCACCACCGAACTGGCGA TGCGCGGCCGCGCGCTGGAACGCCTCGGCCGCCACGACGAGGCCTGGGCCGCCTATCTTGCCGGCCGCGACTTCCAGCGC GAACGCGCCCGCCGCCGGTTCGATCCCGCGCCGATCGAGGCCCGGCTCGCCGGCATCCGCGAAACGTTCAGGGCCGACCG TCTGGCAGGGCTGCCGCGGCCGGCGCCAGTGGCGAACGCGCCGGTGCCGGTCTTTCTGCTCGGCACGCCGCGCTCCGGAT CGTCCCTGCTGGAACACCTGCTGGCCCAGGCGGCGGAGATCGACCCCGCGGACAACCGCGCGCCACTGCCCGGCCTCGGG CGGCTGCTGCCCAGGCTGGTCGAGGGGTTTGGCGGGCCGACGCTCGACTTTCCGGCCGCCCTCGAGGGCACGGTGGCCGG CGAGGCGCAGGACATTCCGGCCATTCTCGCCAGCCGCTATGTCGCCCTGATCCGCGCCGCCGGCATTGTCGGGCCGCAGG CGCGGTTCGTGACCGACCGCCATCCCGAACTGCCCTGGCTGCTCGGCCTCGCCAACACGCTGTTCCCGGGGGCGCCGGTG ATCCATGTGCTGCGCCACCCCCTCGACGTGGTACTGTCCGGCTTCGCGCAGGACCGGCTTTACGAGGGCAATGCCGGCGT GACGCTGGCCAGCCTCGCCCGGCTCTACGACGCGCAGATGAACGCCATCGCCCATGTCCGCGGACAGACCACCATGCGCT ACCTGCCCGTCCGCTACGAGGATCTCGTCACCGACACGGAGGCGACGCTGCGCCGCGTGCTCGACTTCATCGGCCTGGCC GCCGACCCCGCCGCGATGATCGCCGCCCCGCCGCGCGCCGTCCCGCGCGTTCCGGCCTATCGCGCCGAGCTGGAGCCGCC GCATCGCCGGGGTGTGTTCCGCCACCGCCGCTTCGGCGACGTCTTCGGCGAGGCGATGCCGGTTCTCGCCCCCTGGATCG AGCGCCTCGGCTATGCCGCCACGCCGGAGGGCGCGGCATGA
Upstream 100 bases:
>100_bases TCAAGGTCCTTGTTTTACTTGAGATTTATTTGCAATTGAGGGTGTCCGGCCGAGGCGGCCCGGCCCTTGCGCGGGACCGC AAACCCTGCATGATCCGCCC
Downstream 100 bases:
>100_bases GCGCCGCGCCGCAACCGACGGCGAAGATCACGGTCGGCGAGGTGCTGGCCGAGATCACCGCGCTCGAACGGGACGGCAGG CTGGAGGACGCCGAATCGCT
Product: sulfotransferase
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Sulfotransferase Domain Family Protein; Flp Pilus Assembly Protein; TPR/Sulfotransferase Domain-Containing Protein
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MSAASPSPAPRPDPAPCACGSGLRARRCCALDGGGPPDPAHHALVAPQVEQARAARTAGRNREAERLLLQVLDLAPLHRE ALRLLYEIRHAERRIPAAIALVARIAALPPETPAAHVQHAQLLIGQGRHAEAEAPARRALLLAPRDPSVHHLLGMIQTET GRPTSGERHYRMAEALIEAPNPTLLGNLAWNLRQQGRLDEAAAVYGQALSGPARPVRALAGLAQVEAGRGRFDAAEALLA EAGTSAAAPGDRMVAALIALSRLRAGDAEAALDRIAATEAAIAPQPLLTTELAMRGRALERLGRHDEAWAAYLAGRDFQR ERARRRFDPAPIEARLAGIRETFRADRLAGLPRPAPVANAPVPVFLLGTPRSGSSLLEHLLAQAAEIDPADNRAPLPGLG RLLPRLVEGFGGPTLDFPAALEGTVAGEAQDIPAILASRYVALIRAAGIVGPQARFVTDRHPELPWLLGLANTLFPGAPV IHVLRHPLDVVLSGFAQDRLYEGNAGVTLASLARLYDAQMNAIAHVRGQTTMRYLPVRYEDLVTDTEATLRRVLDFIGLA ADPAAMIAAPPRAVPRVPAYRAELEPPHRRGVFRHRRFGDVFGEAMPVLAPWIERLGYAATPEGAA
Sequences:
>Translated_626_residues MSAASPSPAPRPDPAPCACGSGLRARRCCALDGGGPPDPAHHALVAPQVEQARAARTAGRNREAERLLLQVLDLAPLHRE ALRLLYEIRHAERRIPAAIALVARIAALPPETPAAHVQHAQLLIGQGRHAEAEAPARRALLLAPRDPSVHHLLGMIQTET GRPTSGERHYRMAEALIEAPNPTLLGNLAWNLRQQGRLDEAAAVYGQALSGPARPVRALAGLAQVEAGRGRFDAAEALLA EAGTSAAAPGDRMVAALIALSRLRAGDAEAALDRIAATEAAIAPQPLLTTELAMRGRALERLGRHDEAWAAYLAGRDFQR ERARRRFDPAPIEARLAGIRETFRADRLAGLPRPAPVANAPVPVFLLGTPRSGSSLLEHLLAQAAEIDPADNRAPLPGLG RLLPRLVEGFGGPTLDFPAALEGTVAGEAQDIPAILASRYVALIRAAGIVGPQARFVTDRHPELPWLLGLANTLFPGAPV IHVLRHPLDVVLSGFAQDRLYEGNAGVTLASLARLYDAQMNAIAHVRGQTTMRYLPVRYEDLVTDTEATLRRVLDFIGLA ADPAAMIAAPPRAVPRVPAYRAELEPPHRRGVFRHRRFGDVFGEAMPVLAPWIERLGYAATPEGAA >Mature_625_residues SAASPSPAPRPDPAPCACGSGLRARRCCALDGGGPPDPAHHALVAPQVEQARAARTAGRNREAERLLLQVLDLAPLHREA LRLLYEIRHAERRIPAAIALVARIAALPPETPAAHVQHAQLLIGQGRHAEAEAPARRALLLAPRDPSVHHLLGMIQTETG RPTSGERHYRMAEALIEAPNPTLLGNLAWNLRQQGRLDEAAAVYGQALSGPARPVRALAGLAQVEAGRGRFDAAEALLAE AGTSAAAPGDRMVAALIALSRLRAGDAEAALDRIAATEAAIAPQPLLTTELAMRGRALERLGRHDEAWAAYLAGRDFQRE RARRRFDPAPIEARLAGIRETFRADRLAGLPRPAPVANAPVPVFLLGTPRSGSSLLEHLLAQAAEIDPADNRAPLPGLGR LLPRLVEGFGGPTLDFPAALEGTVAGEAQDIPAILASRYVALIRAAGIVGPQARFVTDRHPELPWLLGLANTLFPGAPVI HVLRHPLDVVLSGFAQDRLYEGNAGVTLASLARLYDAQMNAIAHVRGQTTMRYLPVRYEDLVTDTEATLRRVLDFIGLAA DPAAMIAAPPRAVPRVPAYRAELEPPHRRGVFRHRRFGDVFGEAMPVLAPWIERLGYAATPEGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66906; Mature: 66774
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASPSPAPRPDPAPCACGSGLRARRCCALDGGGPPDPAHHALVAPQVEQARAARTAGR CCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCEECCCHHHHHHHHHHCC NREAERLLLQVLDLAPLHREALRLLYEIRHAERRIPAAIALVARIAALPPETPAAHVQHA CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH QLLIGQGRHAEAEAPARRALLLAPRDPSVHHLLGMIQTETGRPTSGERHYRMAEALIEAP HHHHCCCCCCCCCCCHHCEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC NPTLLGNLAWNLRQQGRLDEAAAVYGQALSGPARPVRALAGLAQVEAGRGRFDAAEALLA CCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH EAGTSAAAPGDRMVAALIALSRLRAGDAEAALDRIAATEAAIAPQPLLTTELAMRGRALE HCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RLGRHDEAWAAYLAGRDFQRERARRRFDPAPIEARLAGIRETFRADRLAGLPRPAPVANA HHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PVPVFLLGTPRSGSSLLEHLLAQAAEIDPADNRAPLPGLGRLLPRLVEGFGGPTLDFPAA CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH LEGTVAGEAQDIPAILASRYVALIRAAGIVGPQARFVTDRHPELPWLLGLANTLFPGAPV HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHH IHVLRHPLDVVLSGFAQDRLYEGNAGVTLASLARLYDAQMNAIAHVRGQTTMRYLPVRYE HHHHHCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHH DLVTDTEATLRRVLDFIGLAADPAAMIAAPPRAVPRVPAYRAELEPPHRRGVFRHRRFGD HHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHH VFGEAMPVLAPWIERLGYAATPEGAA HHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SAASPSPAPRPDPAPCACGSGLRARRCCALDGGGPPDPAHHALVAPQVEQARAARTAGR CCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCEECCCHHHHHHHHHHCC NREAERLLLQVLDLAPLHREALRLLYEIRHAERRIPAAIALVARIAALPPETPAAHVQHA CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH QLLIGQGRHAEAEAPARRALLLAPRDPSVHHLLGMIQTETGRPTSGERHYRMAEALIEAP HHHHCCCCCCCCCCCHHCEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC NPTLLGNLAWNLRQQGRLDEAAAVYGQALSGPARPVRALAGLAQVEAGRGRFDAAEALLA CCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH EAGTSAAAPGDRMVAALIALSRLRAGDAEAALDRIAATEAAIAPQPLLTTELAMRGRALE HCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RLGRHDEAWAAYLAGRDFQRERARRRFDPAPIEARLAGIRETFRADRLAGLPRPAPVANA HHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PVPVFLLGTPRSGSSLLEHLLAQAAEIDPADNRAPLPGLGRLLPRLVEGFGGPTLDFPAA CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH LEGTVAGEAQDIPAILASRYVALIRAAGIVGPQARFVTDRHPELPWLLGLANTLFPGAPV HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHH IHVLRHPLDVVLSGFAQDRLYEGNAGVTLASLARLYDAQMNAIAHVRGQTTMRYLPVRYE HHHHHCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHH DLVTDTEATLRRVLDFIGLAADPAAMIAAPPRAVPRVPAYRAELEPPHRRGVFRHRRFGD HHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHH VFGEAMPVLAPWIERLGYAATPEGAA HHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA