| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yjeP [C]
Identifier: 148259255
GI number: 148259255
Start: 272229
End: 273335
Strand: Reverse
Name: yjeP [C]
Synonym: Acry_0235
Alternate gene names: 148259255
Gene position: 273335-272229 (Counterclockwise)
Preceding gene: 148259256
Following gene: 148259250
Centisome position: 8.06
GC content: 68.56
Gene sequence:
>1107_bases ATGACCCGATCCGCGCCCGGCAACCCCATCGCGCACGCCGCCGGCAACCTTACAATCGTGCTGCACGGCTGGCCGCCTTT GGTCACCACGGCAATCCTGGCCGCCGCCGCGATCCTGGTCGCGATCGTGTTCCACGCGATGCTGTTCCGGCTGCTCCCCC GCCCGTTGCGCGACCGCGGCAGGGCCACGGGGGCGCTGGTCGCCCGCGTGCGGGCCATCGTGCTGGCCTTCCTGATCGTG CTGATGCTGACCACGGTGGTGCCGCAGGCGCCGCTCGGACCGGGCCTGCGCTTCGGCGTGCTGCACGCGCTGAGCGCGGG CCTCGTGATCCTGATCGGCTGGGCCGTGCTGCTCGCGATCGACATCTACACGACGCGCCAGCTTTCCCACCGTCCCGACA ACATCCAGGCCGACGCCATCGCCCGCAAGCACGTGACTCAATGGCAGGTGCTGCGCCGGGCCAGCCATGTGCTGACCATC ATCATCACCACGGCCGCCGCGCTGATGGTGTTTCCAGCGGTGCGGGATTACGGGGTGTCGCTGCTCGCCTCCGCCGGCGC GGCCGGGCTCGTCGTCGGCCTCGCGGCGCGGCCGGTGCTCTCCAATCTCATCGCCGGCATCCAGATCGCCATCACCCAGC CGCTGCGCGTCGAGGATGCGGTGGTGATCAACGGCCAGTGGGGCTGGGTGGAGGAAATTACCTCGACCTACGTGGTGGTG CGGATCTGGAACTGGCAGCGCATGGTCGTCCCCCTGGCCTGGCTGCTCGAACAGCCGTTCCAGAACTGGACACGCGACTC GTCAGAACTGATCGGCGAGGTGCACTGGAGCCTCGACTATACCGTGCCGATGGACGTGCTGCGCCGCAAGCTCGACGAGA TCGTGCACGCGACGCCGCTCTGGAGCGGCAAGGTGGTGGTGCTGCAGGTCACCCACGCGCTGGAGACCACGCTGACACTG CGCGCCCTGGTCTCGGCGCGCAATTCGGGCGAGGCCTGGGATCTGCGCTGCTTCGTGCGCGAGCAGATGATCACGTTCCT GCAGAAGGAATATCCATACGCGCTGCCGCGCCGGCGCGTCGACCTCGAACGGACGGAAGTCGCCTGA
Upstream 100 bases:
>100_bases CGAAGGTTGTATCGCCGGCACGGCGGTCTACCTCCTCACTGAGCCCGGCGGCCGCGATCCCTTGCGGGGGACGCGGCGCG CCACCAGAGGAGGAGGCCGC
Downstream 100 bases:
>100_bases CGCTTGTGCTCGGGCCTACGACGAAACGGACGGCAACGGGCCGGCGACGAGCACGAGGTCGTCGCGGTGGATCAGCTCAT CCCGACCGCGCCAGCCGAGC
Product: mechanosensitive ion channel MscS
Products: NA
Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel MscS; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Domain-Containing Protein; Mechanosensitive Ion Channel Protein; MscS Mechanosensitive Ion Channel Protein; Transporter MscS Family; MscS Family Transporter; Small-Conductance Mechanosensitive Channel-Like Protein; Mechanosensitive Channel Protein
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRGRATGALVARVRAIVLAFLIV LMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAIDIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTI IITTAAALMVFPAVRDYGVSLLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPLWSGKVVVLQVTHALETTLTL RALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRVDLERTEVA
Sequences:
>Translated_368_residues MTRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRGRATGALVARVRAIVLAFLIV LMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAIDIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTI IITTAAALMVFPAVRDYGVSLLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPLWSGKVVVLQVTHALETTLTL RALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRVDLERTEVA >Mature_367_residues TRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRGRATGALVARVRAIVLAFLIVL MLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAIDIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTII ITTAAALMVFPAVRDYGVSLLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVVR IWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPLWSGKVVVLQVTHALETTLTLR ALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRVDLERTEVA
Specific function: Unknown
COG id: COG0668
COG function: function code M; Small-conductance mechanosensitive channel
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40632; Mature: 40501
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRG CCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC RATGALVARVRAIVLAFLIVLMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTIIITTAAALMVFPAVRDYGVS HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV HHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCEEEECCCCCHHHHHHCCEEEE RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPL EEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCC WSGKVVVLQVTHALETTLTLRALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRV CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC DLERTEVA CCHHHCCC >Mature Secondary Structure TRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRG CCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC RATGALVARVRAIVLAFLIVLMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTIIITTAAALMVFPAVRDYGVS HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV HHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCEEEECCCCCHHHHHHCCEEEE RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPL EEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCC WSGKVVVLQVTHALETTLTLRALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRV CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC DLERTEVA CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA