| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is fabG2 [H]
Identifier: 148259231
GI number: 148259231
Start: 243647
End: 244348
Strand: Reverse
Name: fabG2 [H]
Synonym: Acry_0211
Alternate gene names: 148259231
Gene position: 244348-243647 (Counterclockwise)
Preceding gene: 148259232
Following gene: 148259222
Centisome position: 7.21
GC content: 72.51
Gene sequence:
>702_bases ATGGCCAAGGAACGGGTGCTGGTCACGGGCGGGGCTGCGGGCATCGGCGCGGCGAGCGTCGCGCGCTGCCGCGAGGAGGG CTACGAGGTCGTGGTGATCGACCGGATCGGCGATGGCATCGTCGCCGACCTGTCGGACCCGGCGGCGACCGAGGCCGCCC TAGCCGAGGCGCTGCGCGGCGGGCCGATCACCCGGCTGGTCAACAATGTCGGCACTGTCCGCCCCGCCCCGGTCGAGGCG CAGACCGTGGCCGATCTCGACGCCGTGGTCTCGCTCAACCTGCGCTGCAGCCTGCAATGCGTGCAGGCGCTGCTGCCCGG CATGAAGGCGGCCGGGTTCGGCCGCATCGTCAACATCGCCTCGCGCGCCGCCCTCGGCAAGGAAGACCGCACCGCCTACG CCGCGACCAAGGCCGGGCTGATCGGCATGGCGAAGGTCTGGGCGCTGGAACTCGGCCGCTTCGGCATCACCGCCAACGCC ATCGGCCCCGGCCCGATCCGCACCGAGCTGTTCGACCGGGTAAACCCGCCGGACGATCCGCGCACCACGGCGATCATCGA GGGCATCCCGGTCCGCCGGATCGGCACCCCGGCGGACGTGGCGCACGCAATCGCCTATCTGCTCGACCAGCGCAGCGGCT TCGTCACCGGCCAGGTGCTCTATGTCTGCGGCGGCATGACCGTCGGCGCCGCCGGGGCCTAA
Upstream 100 bases:
>100_bases CGCACCCGCGCCGCCCCTTGACGGGGGCGGCGGCATGACGGCTTGAAGAGAGGCCGGCGCCGGATCCACGGCGCCGGCCT TTTGTCTGTCGGGAGGAACA
Downstream 100 bases:
>100_bases TCCGCAGCGGCGAGCGCCAGCTCCGCCTCGCCGGCAAGTGCTCGATGCGGCGCCGGCCGGCCGATCGCGTGATGGTCGAG CCCCGCCGCGCGCATCGCCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase 2 [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAKERVLVTGGAAGIGAASVARCREEGYEVVVIDRIGDGIVADLSDPAATEAALAEALRGGPITRLVNNVGTVRPAPVEA QTVADLDAVVSLNLRCSLQCVQALLPGMKAAGFGRIVNIASRAALGKEDRTAYAATKAGLIGMAKVWALELGRFGITANA IGPGPIRTELFDRVNPPDDPRTTAIIEGIPVRRIGTPADVAHAIAYLLDQRSGFVTGQVLYVCGGMTVGAAGA
Sequences:
>Translated_233_residues MAKERVLVTGGAAGIGAASVARCREEGYEVVVIDRIGDGIVADLSDPAATEAALAEALRGGPITRLVNNVGTVRPAPVEA QTVADLDAVVSLNLRCSLQCVQALLPGMKAAGFGRIVNIASRAALGKEDRTAYAATKAGLIGMAKVWALELGRFGITANA IGPGPIRTELFDRVNPPDDPRTTAIIEGIPVRRIGTPADVAHAIAYLLDQRSGFVTGQVLYVCGGMTVGAAGA >Mature_232_residues AKERVLVTGGAAGIGAASVARCREEGYEVVVIDRIGDGIVADLSDPAATEAALAEALRGGPITRLVNNVGTVRPAPVEAQ TVADLDAVVSLNLRCSLQCVQALLPGMKAAGFGRIVNIASRAALGKEDRTAYAATKAGLIGMAKVWALELGRFGITANAI GPGPIRTELFDRVNPPDDPRTTAIIEGIPVRRIGTPADVAHAIAYLLDQRSGFVTGQVLYVCGGMTVGAAGA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=32.3651452282158, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=31.6, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=30.1255230125523, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=28.0487804878049, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI59889578, Length=197, Percent_Identity=31.4720812182741, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI19923817, Length=248, Percent_Identity=28.2258064516129, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI66933014, Length=218, Percent_Identity=26.1467889908257, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4503301, Length=201, Percent_Identity=29.3532338308458, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI7657478, Length=246, Percent_Identity=30.4878048780488, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=237, Percent_Identity=31.2236286919831, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI87082100, Length=246, Percent_Identity=32.520325203252, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=27.9352226720648, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=29.9180327868852, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1789208, Length=181, Percent_Identity=33.1491712707182, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786701, Length=187, Percent_Identity=31.5508021390374, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787905, Length=166, Percent_Identity=33.7349397590361, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788459, Length=173, Percent_Identity=33.5260115606936, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=31.5573770491803, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=29.4605809128631, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=23.7154150197628, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786812, Length=246, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=28.1746031746032, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=30.1652892561983, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=31.8367346938775, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560676, Length=224, Percent_Identity=28.125, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562910, Length=257, Percent_Identity=28.7937743190661, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=26.7175572519084, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=26.9076305220884, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17561402, Length=246, Percent_Identity=28.8617886178862, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=27.6422764227642, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=24.8091603053435, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=26.5625, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=202, Percent_Identity=27.7227722772277, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=31.6666666666667, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=31.5352697095436, Blast_Score=94, Evalue=8e-20, Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=27.3469387755102, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=27.5720164609054, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571526, Length=244, Percent_Identity=29.0983606557377, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356301, Length=208, Percent_Identity=30.2884615384615, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI18859837, Length=203, Percent_Identity=30.5418719211823, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=27.6422764227642, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=28.7449392712551, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 23912; Mature: 23781
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKERVLVTGGAAGIGAASVARCREEGYEVVVIDRIGDGIVADLSDPAATEAALAEALRG CCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHCC GPITRLVNNVGTVRPAPVEAQTVADLDAVVSLNLRCSLQCVQALLPGMKAAGFGRIVNIA CHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCHHHHHHH SRAALGKEDRTAYAATKAGLIGMAKVWALELGRFGITANAIGPGPIRTELFDRVNPPDDP HHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCC RTTAIIEGIPVRRIGTPADVAHAIAYLLDQRSGFVTGQVLYVCGGMTVGAAGA CCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCC >Mature Secondary Structure AKERVLVTGGAAGIGAASVARCREEGYEVVVIDRIGDGIVADLSDPAATEAALAEALRG CCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHCC GPITRLVNNVGTVRPAPVEAQTVADLDAVVSLNLRCSLQCVQALLPGMKAAGFGRIVNIA CHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCHHHHHHH SRAALGKEDRTAYAATKAGLIGMAKVWALELGRFGITANAIGPGPIRTELFDRVNPPDDP HHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCC RTTAIIEGIPVRRIGTPADVAHAIAYLLDQRSGFVTGQVLYVCGGMTVGAAGA CCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]