| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259188
Identifier: 148259188
GI number: 148259188
Start: 195047
End: 195508
Strand: Reverse
Name: 148259188
Synonym: Acry_0168
Alternate gene names: NA
Gene position: 195508-195047 (Counterclockwise)
Preceding gene: 148259189
Following gene: 148259187
Centisome position: 5.77
GC content: 68.83
Gene sequence:
>462_bases ATGGATATACGCGCGCGCCTCGCCGAGAACGGCATAACCCTTCCGCCCGCGGCGAAGGCCGTGGCGAATTACGTGCCGGT GGTGGTCGCCGGTGGAATGGCGATCGTCAGCGGGCAGTTGCCGCTCGCGGGCGGCAAGCTCGCGGTGACGGGAAAGCTCG GCGACGGAGTGACGGTCGAGGACGGGACTGCGGCAGCGCGGGCCTGCTTTATCAACGTGCTCGCGCAGATCGAGGCGCAT GTCGAGGGCGGACTCGATGCCGTTGCCCAGGTGGTGCGGCTCGGCGGGTTCATTGCGGCGACGGCGGATTTCGCCGAGCA CGCGAAAGTGATGAACGGGGCATCGGACCTCGCGGTGGCGATTTTCGGCGAGGCGGGGCGGCATGCGCGCTCGACCGTGG GCGTCGCCTCGCTGCCGCTCAACGCGGCGGTCGAGGTCGAGGGGATGTTTTTGCTCCGCTGA
Upstream 100 bases:
>100_bases TGTCGATGCCGCCGCTCCGCTGCTGCCGCTGGACCTGCCGGAGACCGGAACCGGCCGGCCGAAGCGCCAGCGTCCCGTCC TGAAACTCGTGAGCTGATCC
Downstream 100 bases:
>100_bases TTGCGCCGGGCCGCCCTTGCGCGTATGCCCCGGTTGCACTGCAAAAGGGGAGATCAGATGAGCGCCATCGCCGATATCAC CGCACGGGAAATTCTCGACA
Product: endoribonuclease L-PSP
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Transcription Regulator; Transcriptional Regulator; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Endoribonuclease-L-PSP Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MDIRARLAENGITLPPAAKAVANYVPVVVAGGMAIVSGQLPLAGGKLAVTGKLGDGVTVEDGTAAARACFINVLAQIEAH VEGGLDAVAQVVRLGGFIAATADFAEHAKVMNGASDLAVAIFGEAGRHARSTVGVASLPLNAAVEVEGMFLLR
Sequences:
>Translated_153_residues MDIRARLAENGITLPPAAKAVANYVPVVVAGGMAIVSGQLPLAGGKLAVTGKLGDGVTVEDGTAAARACFINVLAQIEAH VEGGLDAVAQVVRLGGFIAATADFAEHAKVMNGASDLAVAIFGEAGRHARSTVGVASLPLNAAVEVEGMFLLR >Mature_153_residues MDIRARLAENGITLPPAAKAVANYVPVVVAGGMAIVSGQLPLAGGKLAVTGKLGDGVTVEDGTAAARACFINVLAQIEAH VEGGLDAVAQVVRLGGFIAATADFAEHAKVMNGASDLAVAIFGEAGRHARSTVGVASLPLNAAVEVEGMFLLR
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15328; Mature: 15328
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRARLAENGITLPPAAKAVANYVPVVVAGGMAIVSGQLPLAGGKLAVTGKLGDGVTVE CCCHHHHHCCCCCCCHHHHHHHHHCCCEEECCEEEEECCCCCCCCEEEEEEECCCCEEEC DGTAAARACFINVLAQIEAHVEGGLDAVAQVVRLGGFIAATADFAEHAKVMNGASDLAVA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCEEEE IFGEAGRHARSTVGVASLPLNAAVEVEGMFLLR EECCCCCCHHHHCCEEECCCCCEEEEEEEEEEC >Mature Secondary Structure MDIRARLAENGITLPPAAKAVANYVPVVVAGGMAIVSGQLPLAGGKLAVTGKLGDGVTVE CCCHHHHHCCCCCCCHHHHHHHHHCCCEEECCEEEEECCCCCCCCEEEEEEECCCCEEEC DGTAAARACFINVLAQIEAHVEGGLDAVAQVVRLGGFIAATADFAEHAKVMNGASDLAVA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCEEEE IFGEAGRHARSTVGVASLPLNAAVEVEGMFLLR EECCCCCCHHHHCCEEECCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA