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The map label for this gene is 148259139

Identifier: 148259139

GI number: 148259139

Start: 131468

End: 132304

Strand: Reverse

Name: 148259139

Synonym: Acry_0119

Alternate gene names: NA

Gene position: 132304-131468 (Counterclockwise)

Preceding gene: 148259140

Following gene: 148259138

Centisome position: 3.9

GC content: 66.67

Gene sequence:

>837_bases
ATGAGTGCCGCCGCGAGCATCGAACACGCTTCTGGCAAGGACCGCGGTGACGAGAATTTCCCGGTCGGCTCTTGGCTGAT
TCGCGCCGGGCTGCGCCGGCACGTGCATGCCTATTACGCGTTCGCGCGCAATGCCGACGACATCGCCGATCATCCCGATC
TTGCTCCGGCGGAAAAGATCGCCCGCCTCGATGCAATGGAAGCGGTGCTGGACGGCGACGATCCGACGCGTTCGCCTTCG
GCGGCACGGCTTCGCGAGAGCCTGGCGGAGACCAACGTCGATCCGGTCCATGCGCGCGAATTGCTCGTTGCCTTCCGGCA
GGATGCGACCAAGACACGCTATGCGAGTTGGGACGAGTTGATGCGCTATTGTCGCTATTCGGCGGCGCCGGTCGGACGTT
ACGTGCTCGATCTGCACGGCGAGAGCCGCCAGAGTTGGCCTGCCTCCGACGCGCTGTGCGCCAGCCTGCAGGTGCTCAAC
CACCTTCAGGATTGCGCGAAGGATTTCGACACCCTCGACCGGTCCTACATCCCCGGTGACTGGTTGCAGGCGGTCGGGCT
CGGGCCGGACGCCGTCACCGCGAAGGCGACTCCCCCGGCACTGCGCTCGGTGTTCGATGCGATGCTGAAAAGGACGGCGG
AGTTAAACGCGAAGGCGGCGCGTCTTCCGGGATTCGTGGTCGCCCGCGGGTTGCGGGTGGAGACGGCGATCATCGTTGGC
CTCGCCCGCCGGCTGCACCGCCGCCTACTGCGGGAGGATCCGCTGGCCGGGCGCGTGAAGCTGCGCCGTAACGACGCCAT
CAGCGCCGTACTCGCCGGCCTTCCACGCCTGCTCTGA

Upstream 100 bases:

>100_bases
TGATCGCGCTTGTCTATATGGAGGCGACGTTGGCCTCCGCACTGCGCTATTGGCGTGGCACGGGGGCTGCCTGGAAAAGC
CGCGATTATGGAGCCGACGC

Downstream 100 bases:

>100_bases
TGTTCATTCCCGCCAACGCCGCGCGCTTCGCCGATGACGCCGCAACCGTCGCCGCCGCGACGCGCGCCGCCGGCACGTCC
TTCTATCGCGGCATGAGTGT

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSAAASIEHASGKDRGDENFPVGSWLIRAGLRRHVHAYYAFARNADDIADHPDLAPAEKIARLDAMEAVLDGDDPTRSPS
AARLRESLAETNVDPVHARELLVAFRQDATKTRYASWDELMRYCRYSAAPVGRYVLDLHGESRQSWPASDALCASLQVLN
HLQDCAKDFDTLDRSYIPGDWLQAVGLGPDAVTAKATPPALRSVFDAMLKRTAELNAKAARLPGFVVARGLRVETAIIVG
LARRLHRRLLREDPLAGRVKLRRNDAISAVLAGLPRLL

Sequences:

>Translated_278_residues
MSAAASIEHASGKDRGDENFPVGSWLIRAGLRRHVHAYYAFARNADDIADHPDLAPAEKIARLDAMEAVLDGDDPTRSPS
AARLRESLAETNVDPVHARELLVAFRQDATKTRYASWDELMRYCRYSAAPVGRYVLDLHGESRQSWPASDALCASLQVLN
HLQDCAKDFDTLDRSYIPGDWLQAVGLGPDAVTAKATPPALRSVFDAMLKRTAELNAKAARLPGFVVARGLRVETAIIVG
LARRLHRRLLREDPLAGRVKLRRNDAISAVLAGLPRLL
>Mature_277_residues
SAAASIEHASGKDRGDENFPVGSWLIRAGLRRHVHAYYAFARNADDIADHPDLAPAEKIARLDAMEAVLDGDDPTRSPSA
ARLRESLAETNVDPVHARELLVAFRQDATKTRYASWDELMRYCRYSAAPVGRYVLDLHGESRQSWPASDALCASLQVLNH
LQDCAKDFDTLDRSYIPGDWLQAVGLGPDAVTAKATPPALRSVFDAMLKRTAELNAKAARLPGFVVARGLRVETAIIVGL
ARRLHRRLLREDPLAGRVKLRRNDAISAVLAGLPRLL

Specific function: Probably part of the operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017827
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: NA

Molecular weight: Translated: 30575; Mature: 30444

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAASIEHASGKDRGDENFPVGSWLIRAGLRRHVHAYYAFARNADDIADHPDLAPAEKI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH
ARLDAMEAVLDGDDPTRSPSAARLRESLAETNVDPVHARELLVAFRQDATKTRYASWDEL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
MRYCRYSAAPVGRYVLDLHGESRQSWPASDALCASLQVLNHLQDCAKDFDTLDRSYIPGD
HHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
WLQAVGLGPDAVTAKATPPALRSVFDAMLKRTAELNAKAARLPGFVVARGLRVETAIIVG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCCHHHHHHHHH
LARRLHRRLLREDPLAGRVKLRRNDAISAVLAGLPRLL
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAAASIEHASGKDRGDENFPVGSWLIRAGLRRHVHAYYAFARNADDIADHPDLAPAEKI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH
ARLDAMEAVLDGDDPTRSPSAARLRESLAETNVDPVHARELLVAFRQDATKTRYASWDEL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
MRYCRYSAAPVGRYVLDLHGESRQSWPASDALCASLQVLNHLQDCAKDFDTLDRSYIPGD
HHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
WLQAVGLGPDAVTAKATPPALRSVFDAMLKRTAELNAKAARLPGFVVARGLRVETAIIVG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCCHHHHHHHHH
LARRLHRRLLREDPLAGRVKLRRNDAISAVLAGLPRLL
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]