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The map label for this gene is 148259138

Identifier: 148259138

GI number: 148259138

Start: 130596

End: 131468

Strand: Reverse

Name: 148259138

Synonym: Acry_0118

Alternate gene names: NA

Gene position: 131468-130596 (Counterclockwise)

Preceding gene: 148259139

Following gene: 148259137

Centisome position: 3.88

GC content: 69.07

Gene sequence:

>873_bases
ATGTTCATTCCCGCCAACGCCGCGCGCTTCGCCGATGACGCCGCAACCGTCGCCGCCGCGACGCGCGCCGCCGGCACGTC
CTTCTATCGCGGCATGAGTGTTCTCCCTGCGCCGCGCCGCACCGCGATGTATGCAATCTACACGTTCTGCCGGATCGTGG
ACGATATCGCCGACGAAGAGGCGCCGCTTGCGGCGAAGCGCGAAGGGCTCGATGCCTGGCGCCGGCGGATCGACGCGCTG
CCCGAAGGCGGTGATGACCCGGTCACCCGCCTGCTGCGCGATGCCTCGCTGCGCTACGCGTTGCGGCGGGAGGATTTCCA
CGCGATCATCGACGGGATGGAGATGGATGCCGGCGCGCCGATCATCGCGCCGGACATGGCCACGCTCGATCTTTATTGCG
ACCGTGTGGCCTCGGCAGTGGGCCGGCTGTCGATCCGGGTGTTCGGCGAGGTTTCGGCACAGGGCGACAGGGTGGCACAT
CATCTCGGCCGGGCGTTGCAACTCACCAACATCCTGCGCGATGTCGGCGAGGATGCGGCGCGGGGGCGAATATATCTCCC
GCGCGAGGCGCTGGAGGCTGCCGATGCTGCTGCCAATCCGGCAACGCTGCTGGCCGATCCGGGACTGAAGCGGGCAATGG
CCGAGATCGCCGGGCTGGCCGAGCAACATTTCGCTGAGGCCGCTGCCGCGATGCGCGGCTGCGACCGCCGCGCCGTGCTG
CCGGCACGAATGATGGCGGATGCCTATCGGCCGTTGCTGGGGGTGATGCGCGCGGCGGGTTTCGCCCATCCCGAGCGCCG
GCTCAGCCTGCCAGCCTGGCGCAAGCTGCGCCTTGCCGCCGAGCTTCTCATCCGGACTGACCGGCACCGATGA

Upstream 100 bases:

>100_bases
ACCGCCGCCTACTGCGGGAGGATCCGCTGGCCGGGCGCGTGAAGCTGCGCCGTAACGACGCCATCAGCGCCGTACTCGCC
GGCCTTCCACGCCTGCTCTG

Downstream 100 bases:

>100_bases
CCCGCGTCCATGTGATCGGCGCCGGCATGGCCGGGCTGTCCGCGGCGACAACCCTCGCCGCGCGGGGGTGCCGGGTGGTG
CTGTACGAGGCGGCGAAATG

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MFIPANAARFADDAATVAAATRAAGTSFYRGMSVLPAPRRTAMYAIYTFCRIVDDIADEEAPLAAKREGLDAWRRRIDAL
PEGGDDPVTRLLRDASLRYALRREDFHAIIDGMEMDAGAPIIAPDMATLDLYCDRVASAVGRLSIRVFGEVSAQGDRVAH
HLGRALQLTNILRDVGEDAARGRIYLPREALEAADAAANPATLLADPGLKRAMAEIAGLAEQHFAEAAAAMRGCDRRAVL
PARMMADAYRPLLGVMRAAGFAHPERRLSLPAWRKLRLAAELLIRTDRHR

Sequences:

>Translated_290_residues
MFIPANAARFADDAATVAAATRAAGTSFYRGMSVLPAPRRTAMYAIYTFCRIVDDIADEEAPLAAKREGLDAWRRRIDAL
PEGGDDPVTRLLRDASLRYALRREDFHAIIDGMEMDAGAPIIAPDMATLDLYCDRVASAVGRLSIRVFGEVSAQGDRVAH
HLGRALQLTNILRDVGEDAARGRIYLPREALEAADAAANPATLLADPGLKRAMAEIAGLAEQHFAEAAAAMRGCDRRAVL
PARMMADAYRPLLGVMRAAGFAHPERRLSLPAWRKLRLAAELLIRTDRHR
>Mature_290_residues
MFIPANAARFADDAATVAAATRAAGTSFYRGMSVLPAPRRTAMYAIYTFCRIVDDIADEEAPLAAKREGLDAWRRRIDAL
PEGGDDPVTRLLRDASLRYALRREDFHAIIDGMEMDAGAPIIAPDMATLDLYCDRVASAVGRLSIRVFGEVSAQGDRVAH
HLGRALQLTNILRDVGEDAARGRIYLPREALEAADAAANPATLLADPGLKRAMAEIAGLAEQHFAEAAAAMRGCDRRAVL
PARMMADAYRPLLGVMRAAGFAHPERRLSLPAWRKLRLAAELLIRTDRHR

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017828
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 31640; Mature: 31640

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIPANAARFADDAATVAAATRAAGTSFYRGMSVLPAPRRTAMYAIYTFCRIVDDIADEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
APLAAKREGLDAWRRRIDALPEGGDDPVTRLLRDASLRYALRREDFHAIIDGMEMDAGAP
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IIAPDMATLDLYCDRVASAVGRLSIRVFGEVSAQGDRVAHHLGRALQLTNILRDVGEDAA
EECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
RGRIYLPREALEAADAAANPATLLADPGLKRAMAEIAGLAEQHFAEAAAAMRGCDRRAVL
CCEEECCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
PARMMADAYRPLLGVMRAAGFAHPERRLSLPAWRKLRLAAELLIRTDRHR
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFIPANAARFADDAATVAAATRAAGTSFYRGMSVLPAPRRTAMYAIYTFCRIVDDIADEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
APLAAKREGLDAWRRRIDALPEGGDDPVTRLLRDASLRYALRREDFHAIIDGMEMDAGAP
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IIAPDMATLDLYCDRVASAVGRLSIRVFGEVSAQGDRVAHHLGRALQLTNILRDVGEDAA
EECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
RGRIYLPREALEAADAAANPATLLADPGLKRAMAEIAGLAEQHFAEAAAAMRGCDRRAVL
CCEEECCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
PARMMADAYRPLLGVMRAAGFAHPERRLSLPAWRKLRLAAELLIRTDRHR
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]