| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148259127
Identifier: 148259127
GI number: 148259127
Start: 116241
End: 116639
Strand: Reverse
Name: 148259127
Synonym: Acry_0107
Alternate gene names: NA
Gene position: 116639-116241 (Counterclockwise)
Preceding gene: 148259128
Following gene: 148259125
Centisome position: 3.44
GC content: 55.89
Gene sequence:
>399_bases ATGTCGGTTCTGGTGCTGGAGCTTCGCCAAGGCGATATCATGATACTGAACGGCGCACCGATCCGGTTCCGCACGAAGTC ACGCATCGAGTTGACGGCGAAGGCACGCTTCATGTTCGGCAAACAAATACTGCGGCCAGACGAGGTCAACACGCCTGCGA AGCAGATCTATTTTGCTCTCCAGACGGCCTATATCGGAACGGACGAAGAACGCCAATCCGCGCTAGTCCGTGCCCGCGAA CTGATAGAGCAGTTCAAGGAAGCGACAACTTCGGCGCTCGCCCGCGAGATCCTCGACCGAGCGCTGGAATGTGCAAAATC GGATGATTGTTATGAAGCCCTTAAGCTTTCGCGGCGAATTATGCGCCACGAAGCAGCCGTTCTGCAGTCATGTCAGTGA
Upstream 100 bases:
>100_bases AGCCGTCGATCCTCACCAAGCTGATCTGATTCATCCGCCGTAACCCGGCCTGCTTCAATAGCAGGCCGGGCCTACTAGTC GCGTTACGAAGGATAAATAT
Downstream 100 bases:
>100_bases TCAAAAGGATCGTAAATGTCTCATTCAGCAAAGGCCTTCAAGGCCTATGAATCCGCCAATCAACTGCGAGGTCAGCGTGA GCAGGATGCCGAAGTGTTCC
Product: flagellar biosynthesis regulator FlbT-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSVLVLELRQGDIMILNGAPIRFRTKSRIELTAKARFMFGKQILRPDEVNTPAKQIYFALQTAYIGTDEERQSALVRARE LIEQFKEATTSALAREILDRALECAKSDDCYEALKLSRRIMRHEAAVLQSCQ
Sequences:
>Translated_132_residues MSVLVLELRQGDIMILNGAPIRFRTKSRIELTAKARFMFGKQILRPDEVNTPAKQIYFALQTAYIGTDEERQSALVRARE LIEQFKEATTSALAREILDRALECAKSDDCYEALKLSRRIMRHEAAVLQSCQ >Mature_131_residues SVLVLELRQGDIMILNGAPIRFRTKSRIELTAKARFMFGKQILRPDEVNTPAKQIYFALQTAYIGTDEERQSALVRAREL IEQFKEATTSALAREILDRALECAKSDDCYEALKLSRRIMRHEAAVLQSCQ
Specific function: Unknown
COG id: COG5443
COG function: function code N; Flagellar biosynthesis regulator FlbT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15091; Mature: 14960
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLVLELRQGDIMILNGAPIRFRTKSRIELTAKARFMFGKQILRPDEVNTPAKQIYFAL CCEEEEEECCCCEEEECCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH QTAYIGTDEERQSALVRARELIEQFKEATTSALAREILDRALECAKSDDCYEALKLSRRI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MRHEAAVLQSCQ HHHHHHHHHCCC >Mature Secondary Structure SVLVLELRQGDIMILNGAPIRFRTKSRIELTAKARFMFGKQILRPDEVNTPAKQIYFAL CEEEEEECCCCEEEECCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH QTAYIGTDEERQSALVRARELIEQFKEATTSALAREILDRALECAKSDDCYEALKLSRRI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MRHEAAVLQSCQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA