| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259031
Identifier: 148259031
GI number: 148259031
Start: 10874
End: 11788
Strand: Reverse
Name: 148259031
Synonym: Acry_0010
Alternate gene names: NA
Gene position: 11788-10874 (Counterclockwise)
Preceding gene: 148259050
Following gene: 148259030
Centisome position: 0.35
GC content: 69.07
Gene sequence:
>915_bases ATGGCGATTTCCCGACGCGCATTCACCCGGCTCGCGGGCGCGGCCGCGCTGGCGCCGGTCACCGGCCGCGCCGCGGGGCG CGCGGCAACCATCGCCTATGCGGGTTCGATGGGGCTGCTGATGGACCGGGCGCTCGGGCCCGCCTTCACGGCTGAGACCA GCGAGCGGTTTCACGGCATCGGGCGGGGCGCGTTCGGCCTCGCCCACCTCATCGCCGCGAAGACGCTGCAGGCTGACGCC TTCATTTCGATCACGAGCGGGCCGATCGAGGTGCTGCAAAAGGCCGGGCTGGTCGGGCATGCGGTGCCGGTGGCGAGCAC GGCGATGGTGCTGGCCTGGTCGCCCCACTCGCGCTTCCGCAAGGATTTCGAGGCGGCCGATGCCGGAGCGCACTGGTTCG ACATCCTCGAAAAGCCCGGCCTGCGCTTCGGCCGCACCGACCCGCGCACCGACCCGCAGGGCCGCAACGTGCTGTTCACC TTCGATCTCGCCCAGCGCTACTATCACAAGCCGGACCTGATCCGGCGCGTGCTCGGCAGGCCGGTGAACCCCGCGCAGAT CTTCCCCGAACCATCGCTTCTCTCGCGAATCGACAGCGGCGCGGTGGATGCCACGATCGGCTACGAAAGCGGCGTGAAGT CGCTCAAGCTGCCGTTCCTCGCACTGCCCCGGCAGATCAACCTCAGCGATCCGGCGATGGTGGCGGACTGGTATTCCCGC GCCGCGATCTCGCTGACGGTAAAGGGCCGCAGGCAGACCTTGCACACGCAGCCACTCGTCTTCTATGCGTGCGTGCCGCG CAACGCCCGGAACCCGGAGGCGGGACGGGCCTTCGTTTCACTGCTGCAAAGCCGCAAGGGACAGGAACTGTTCGCACGAT ACGGCTACAACCCGCCGCTGGGCGGGCCGGTCTGA
Upstream 100 bases:
>100_bases ACGAAAACTGCCGCGTGCCGATATGGCGGATTGACGATATCGCTTAATGAACATATCGATAGTCCGAATTCTGGAATTAC GTCCCCGAAGGAAGCAGCAC
Downstream 100 bases:
>100_bases CCGGAGCACGCCTCGGGGCCCTGCTGCGCGGCTTGGTGCTGCTGCTGCTCGCTTGCCCCTTCGCTGGTCTGTTCATCATG ACCGACTGGCGCAAATTCGC
Product: ABC-type molybdate transport system periplasmic component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAISRRAFTRLAGAAALAPVTGRAAGRAATIAYAGSMGLLMDRALGPAFTAETSERFHGIGRGAFGLAHLIAAKTLQADA FISITSGPIEVLQKAGLVGHAVPVASTAMVLAWSPHSRFRKDFEAADAGAHWFDILEKPGLRFGRTDPRTDPQGRNVLFT FDLAQRYYHKPDLIRRVLGRPVNPAQIFPEPSLLSRIDSGAVDATIGYESGVKSLKLPFLALPRQINLSDPAMVADWYSR AAISLTVKGRRQTLHTQPLVFYACVPRNARNPEAGRAFVSLLQSRKGQELFARYGYNPPLGGPV
Sequences:
>Translated_304_residues MAISRRAFTRLAGAAALAPVTGRAAGRAATIAYAGSMGLLMDRALGPAFTAETSERFHGIGRGAFGLAHLIAAKTLQADA FISITSGPIEVLQKAGLVGHAVPVASTAMVLAWSPHSRFRKDFEAADAGAHWFDILEKPGLRFGRTDPRTDPQGRNVLFT FDLAQRYYHKPDLIRRVLGRPVNPAQIFPEPSLLSRIDSGAVDATIGYESGVKSLKLPFLALPRQINLSDPAMVADWYSR AAISLTVKGRRQTLHTQPLVFYACVPRNARNPEAGRAFVSLLQSRKGQELFARYGYNPPLGGPV >Mature_303_residues AISRRAFTRLAGAAALAPVTGRAAGRAATIAYAGSMGLLMDRALGPAFTAETSERFHGIGRGAFGLAHLIAAKTLQADAF ISITSGPIEVLQKAGLVGHAVPVASTAMVLAWSPHSRFRKDFEAADAGAHWFDILEKPGLRFGRTDPRTDPQGRNVLFTF DLAQRYYHKPDLIRRVLGRPVNPAQIFPEPSLLSRIDSGAVDATIGYESGVKSLKLPFLALPRQINLSDPAMVADWYSRA AISLTVKGRRQTLHTQPLVFYACVPRNARNPEAGRAFVSLLQSRKGQELFARYGYNPPLGGPV
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family. WtpA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022498 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 32844; Mature: 32713
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISRRAFTRLAGAAALAPVTGRAAGRAATIAYAGSMGLLMDRALGPAFTAETSERFHGI CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHCC GRGAFGLAHLIAAKTLQADAFISITSGPIEVLQKAGLVGHAVPVASTAMVLAWSPHSRFR CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCHHHHHCEEEEEEECCHHHHH KDFEAADAGAHWFDILEKPGLRFGRTDPRTDPQGRNVLFTFDLAQRYYHKPDLIRRVLGR HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHCC PVNPAQIFPEPSLLSRIDSGAVDATIGYESGVKSLKLPFLALPRQINLSDPAMVADWYSR CCCHHHCCCCHHHHHHHCCCCCEEEECHHHCCHHHCCCHHHCCCCCCCCCCHHHHHHHCC AAISLTVKGRRQTLHTQPLVFYACVPRNARNPEAGRAFVSLLQSRKGQELFARYGYNPPL EEEEEEECCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCC GGPV CCCC >Mature Secondary Structure AISRRAFTRLAGAAALAPVTGRAAGRAATIAYAGSMGLLMDRALGPAFTAETSERFHGI CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHCC GRGAFGLAHLIAAKTLQADAFISITSGPIEVLQKAGLVGHAVPVASTAMVLAWSPHSRFR CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCHHHHHCEEEEEEECCHHHHH KDFEAADAGAHWFDILEKPGLRFGRTDPRTDPQGRNVLFTFDLAQRYYHKPDLIRRVLGR HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHCC PVNPAQIFPEPSLLSRIDSGAVDATIGYESGVKSLKLPFLALPRQINLSDPAMVADWYSR CCCHHHCCCCHHHHHHHCCCCCEEEECHHHCCHHHCCCHHHCCCCCCCCCCHHHHHHHCC AAISLTVKGRRQTLHTQPLVFYACVPRNARNPEAGRAFVSLLQSRKGQELFARYGYNPPL EEEEEEECCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCC GGPV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA