Click here to switch to the map view.

The map label for this gene is gidA

Identifier: 148243498

GI number: 148243498

Start: 2094556

End: 2096487

Strand: Direct

Name: gidA

Synonym: SynRCC307_2399

Alternate gene names: 148243498

Gene position: 2094556-2096487 (Clockwise)

Preceding gene: 148243497

Following gene: 148243499

Centisome position: 94.14

GC content: 65.01

Gene sequence:

>1932_bases
ATGGAGCCAGCTGCGCTGCCCACCGAATCCTTTGAGCTGATCGTTGTCGGCGGTGGTCATGCCGGCTGCGAAGCAGCGCT
CACCGCCGCGCGGCTGGGCATCTCCACGGCCCTGTTCAGCCTCAACCTTGATCGCATCGCCTGGCAGCCCTGCAACCCAG
CTGTGGGTGGGCCGGCCAAAAGCCAGCTGGTGCATGAAGTGGATGCCCTTGGCGGGGTGATCGGCCGCTTGGCCGATGCC
ACCGCCCTGCAAAAGCGGGTGCTCAATGCCAGCCGCGGCCCAGCGGTCTGGGCCCTGCGCGCCCAAACCGATAAACGCCA
ATACGCCCGCCAGATGCTGCAGCTGCTGCAGCACACCCCGAATCTGGCCCTCCGCGAAGCCATGGTCACGGGGCTGGAAA
CCAGCGGCAGCGCCGAGAGCGGTGATCTGCGCATCACCGGCGTGCGCACCTATTTCGGCAGCATCTACAACGCCCAAGCG
GTGGTGCTCACCACCGGCACTTTCCTGGGCGGACGCATCTGGGTGGGCAACCAATCGATGCCAGCAGGCCGGGCCGGAGA
GCAACCCGCTGAAGGCCTCACTGAAGCGCTGCAGGCCTTGGGTTTTGCCACCGATCGGCTCAAAACCGGCACCCCGGCGC
GGGTGGATCGCCGCAGCGTGGCGCTCGAGACCCTGGAGGAGCAGCCCAGCGATGCCCATGAGCGCTGGTTCTCCTTTGAC
CCAGAAGCCTGGGTGAGCAGTGAACCGATGAGCTGCCACATCACCCGCACGACCGCGGCCACCCATCAGCTGATCAAAGA
CAACCTGCACCTCACCCCGATCTACGGCGGCTTCATCGACAGCAAAGGGCCCCGCTATTGCCCCTCGATCGAAGACAAAA
TCGTGCGCTTTGCCGATAAGGACTCCCATCAAATTTTTCTGGAGCCAGAGGGGCGCGACACCCCTGAGCTCTACATCCAG
GGCTTCTCCACGGGCCTGCCGGAACGGCTGCAACTGAAGCTGCTGCGCACCCTGCCTGGGCTGGAGCAGTGCGTGATGCT
GCGCCCGGCCTACAACGTCGAATACGACTACCTGCCCGCCACCCAACTGCTGCCTTCGCTGCAAACCAAACGCGTGGCGG
GGCTGTTCAGCGCCGGGCAGCTCAATGGCACCACCGGCTATGAGGAAGCGGCGGCCCAGGGCTTGGTGGCTGGGCTCAAT
GCGGTGCGCTTGATCCGCGGCCAAACACCGGTGCACTTCCCCCGCGAAGGCAGCTACATCGGCACCTTGATTGATGATCT
GGTCACCAAGGATTTGCGTGAGCCCTACCGGGTGCTCACCAGCCGCAGTGAATACCGCCTGGTGCTGCGCGGCGACAACG
CCGACCGCCGGCTGACGCCATTAGCGCGCGAGCTGGGCCTGATCGATGCGCGGCGCTGGCAGATCTATGAGCGCAAACAA
GAGGGCATTGCGGCGGAAACCAAGCGCCTAGAAACCGTGCGGCTCAAAGTCAGCGATCCCGTTGCACCAGCGGTGGTGGA
GCAAACCGGCGCGGCGATCAAAGGATCCATCACCCTGGCTGATCTGCTGCGCCGGCCGGGCTTTCACAGCAACGATCTGG
TGCGCCACGGCCTCGCCGATGGCGAGCTGCCGGTCGACGTGCGTGAAGGCGCCGAGATCGATGTGAAATACAGCGGCTAT
CTCGCCCGCCAAACCCAGCAGATCGAGCGGGTACAGCGCCAAGGCCAGCGCCTGATCCCCAGCGGCATCGACTTTTACAG
CATCACCACCCTTTCCCGCGAAGCCCGCGAACGGCTCACCGCAGCCCAACCGCTGAACCTGGGCCAAGCCTCCCGTCTGC
CGGGGGTGAGCCCAGCCGATGTCACAGCGCTGCTGTTGTGGCTGGAGTTGCAGGATCGCCAAGCGGCTACCACCACCCTC
GCCAGACCTTGA

Upstream 100 bases:

>100_bases
AAGCAACGCCATTCGCTAAAACCAGCCCGTAGATCACAGCCGCCGCAGGCCGCAGCCGCCAGGCGCTGAAACCAAATACG
CCGGTTCCGATAATGAAGCG

Downstream 100 bases:

>100_bases
GCTGATCGATAGGTTGGTGCGTTCGCGCCCCAATCCCTGACCAGCTCAACCCTGCCAGATCTGCACCAACGGCATTGCCG
CCATCTGGCCTACTGGGATT

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MEPAALPTESFELIVVGGGHAGCEAALTAARLGISTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDALGGVIGRLADA
TALQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTPNLALREAMVTGLETSGSAESGDLRITGVRTYFGSIYNAQA
VVLTTGTFLGGRIWVGNQSMPAGRAGEQPAEGLTEALQALGFATDRLKTGTPARVDRRSVALETLEEQPSDAHERWFSFD
PEAWVSSEPMSCHITRTTAATHQLIKDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFLEPEGRDTPELYIQ
GFSTGLPERLQLKLLRTLPGLEQCVMLRPAYNVEYDYLPATQLLPSLQTKRVAGLFSAGQLNGTTGYEEAAAQGLVAGLN
AVRLIRGQTPVHFPREGSYIGTLIDDLVTKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLARELGLIDARRWQIYERKQ
EGIAAETKRLETVRLKVSDPVAPAVVEQTGAAIKGSITLADLLRRPGFHSNDLVRHGLADGELPVDVREGAEIDVKYSGY
LARQTQQIERVQRQGQRLIPSGIDFYSITTLSREARERLTAAQPLNLGQASRLPGVSPADVTALLLWLELQDRQAATTTL
ARP

Sequences:

>Translated_643_residues
MEPAALPTESFELIVVGGGHAGCEAALTAARLGISTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDALGGVIGRLADA
TALQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTPNLALREAMVTGLETSGSAESGDLRITGVRTYFGSIYNAQA
VVLTTGTFLGGRIWVGNQSMPAGRAGEQPAEGLTEALQALGFATDRLKTGTPARVDRRSVALETLEEQPSDAHERWFSFD
PEAWVSSEPMSCHITRTTAATHQLIKDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFLEPEGRDTPELYIQ
GFSTGLPERLQLKLLRTLPGLEQCVMLRPAYNVEYDYLPATQLLPSLQTKRVAGLFSAGQLNGTTGYEEAAAQGLVAGLN
AVRLIRGQTPVHFPREGSYIGTLIDDLVTKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLARELGLIDARRWQIYERKQ
EGIAAETKRLETVRLKVSDPVAPAVVEQTGAAIKGSITLADLLRRPGFHSNDLVRHGLADGELPVDVREGAEIDVKYSGY
LARQTQQIERVQRQGQRLIPSGIDFYSITTLSREARERLTAAQPLNLGQASRLPGVSPADVTALLLWLELQDRQAATTTL
ARP
>Mature_643_residues
MEPAALPTESFELIVVGGGHAGCEAALTAARLGISTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDALGGVIGRLADA
TALQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTPNLALREAMVTGLETSGSAESGDLRITGVRTYFGSIYNAQA
VVLTTGTFLGGRIWVGNQSMPAGRAGEQPAEGLTEALQALGFATDRLKTGTPARVDRRSVALETLEEQPSDAHERWFSFD
PEAWVSSEPMSCHITRTTAATHQLIKDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFLEPEGRDTPELYIQ
GFSTGLPERLQLKLLRTLPGLEQCVMLRPAYNVEYDYLPATQLLPSLQTKRVAGLFSAGQLNGTTGYEEAAAQGLVAGLN
AVRLIRGQTPVHFPREGSYIGTLIDDLVTKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLARELGLIDARRWQIYERKQ
EGIAAETKRLETVRLKVSDPVAPAVVEQTGAAIKGSITLADLLRRPGFHSNDLVRHGLADGELPVDVREGAEIDVKYSGY
LARQTQQIERVQRQGQRLIPSGIDFYSITTLSREARERLTAAQPLNLGQASRLPGVSPADVTALLLWLELQDRQAATTTL
ARP

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family

Homologues:

Organism=Homo sapiens, GI74024895, Length=650, Percent_Identity=40, Blast_Score=423, Evalue=1e-118,
Organism=Homo sapiens, GI19882217, Length=675, Percent_Identity=38.5185185185185, Blast_Score=409, Evalue=1e-114,
Organism=Homo sapiens, GI183227703, Length=690, Percent_Identity=37.6811594202899, Blast_Score=404, Evalue=1e-112,
Organism=Escherichia coli, GI2367273, Length=624, Percent_Identity=44.0705128205128, Blast_Score=512, Evalue=1e-146,
Organism=Caenorhabditis elegans, GI17534255, Length=625, Percent_Identity=37.6, Blast_Score=403, Evalue=1e-112,
Organism=Saccharomyces cerevisiae, GI6321202, Length=637, Percent_Identity=40.3453689167975, Blast_Score=441, Evalue=1e-124,
Organism=Drosophila melanogaster, GI24658174, Length=635, Percent_Identity=40.7874015748031, Blast_Score=427, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MNMG_SYNR3 (A5GWP3)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001228655.1
- ProteinModelPortal:   A5GWP3
- SMR:   A5GWP3
- STRING:   A5GWP3
- GeneID:   5156424
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_2399
- eggNOG:   COG0445
- HOGENOM:   HBG284774
- OMA:   GIQFRVL
- ProtClustDB:   PRK05192
- GO:   GO:0005737
- HAMAP:   MF_00129
- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595
- TIGRFAMs:   TIGR00136

Pfam domain/function: PF01134 GIDA

EC number: NA

Molecular weight: Translated: 70352; Mature: 70352

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAALPTESFELIVVGGGHAGCEAALTAARLGISTALFSLNLDRIAWQPCNPAVGGPAK
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEECHHHEECCCCCCCCCCCHH
SQLVHEVDALGGVIGRLADATALQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC
NLALREAMVTGLETSGSAESGDLRITGVRTYFGSIYNAQAVVLTTGTFLGGRIWVGNQSM
CHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCEEEEEECCEECCEEEECCCCC
PAGRAGEQPAEGLTEALQALGFATDRLKTGTPARVDRRSVALETLEEQPSDAHERWFSFD
CCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCC
PEAWVSSEPMSCHITRTTAATHQLIKDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFADK
CCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
DSHQIFLEPEGRDTPELYIQGFSTGLPERLQLKLLRTLPGLEQCVMLRPAYNVEYDYLPA
CCCEEEECCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCH
TQLLPSLQTKRVAGLFSAGQLNGTTGYEEAAAQGLVAGLNAVRLIRGQTPVHFPREGSYI
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
GTLIDDLVTKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLARELGLIDARRWQIYERKQ
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
EGIAAETKRLETVRLKVSDPVAPAVVEQTGAAIKGSITLADLLRRPGFHSNDLVRHGLAD
CCCHHHHHCEEEEEEEECCCCCHHHHHHCCCEEECCEEHHHHHHCCCCCCCHHHHHCCCC
GELPVDVREGAEIDVKYSGYLARQTQQIERVQRQGQRLIPSGIDFYSITTLSREARERLT
CCCCEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHH
AAQPLNLGQASRLPGVSPADVTALLLWLELQDRQAATTTLARP
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCC
>Mature Secondary Structure
MEPAALPTESFELIVVGGGHAGCEAALTAARLGISTALFSLNLDRIAWQPCNPAVGGPAK
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEECHHHEECCCCCCCCCCCHH
SQLVHEVDALGGVIGRLADATALQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC
NLALREAMVTGLETSGSAESGDLRITGVRTYFGSIYNAQAVVLTTGTFLGGRIWVGNQSM
CHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCEEEEEECCEECCEEEECCCCC
PAGRAGEQPAEGLTEALQALGFATDRLKTGTPARVDRRSVALETLEEQPSDAHERWFSFD
CCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCC
PEAWVSSEPMSCHITRTTAATHQLIKDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFADK
CCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
DSHQIFLEPEGRDTPELYIQGFSTGLPERLQLKLLRTLPGLEQCVMLRPAYNVEYDYLPA
CCCEEEECCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCH
TQLLPSLQTKRVAGLFSAGQLNGTTGYEEAAAQGLVAGLNAVRLIRGQTPVHFPREGSYI
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
GTLIDDLVTKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLARELGLIDARRWQIYERKQ
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
EGIAAETKRLETVRLKVSDPVAPAVVEQTGAAIKGSITLADLLRRPGFHSNDLVRHGLAD
CCCHHHHHCEEEEEEEECCCCCHHHHHHCCCEEECCEEHHHHHHCCCCCCCHHHHHCCCC
GELPVDVREGAEIDVKYSGYLARQTQQIERVQRQGQRLIPSGIDFYSITTLSREARERLT
CCCCEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHH
AAQPLNLGQASRLPGVSPADVTALLLWLELQDRQAATTTLARP
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA