| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243497
Identifier: 148243497
GI number: 148243497
Start: 2094267
End: 2094524
Strand: Direct
Name: 148243497
Synonym: SynRCC307_2398
Alternate gene names: NA
Gene position: 2094267-2094524 (Clockwise)
Preceding gene: 148243496
Following gene: 148243498
Centisome position: 94.13
GC content: 64.34
Gene sequence:
>258_bases ATGTGGATCGGGCGGATCTTGCTGCTGGGTTATCTGTCTTCGGTGGTGGCTCGTTGGACGATGAGTCCTGCTGCACACCG CCGTTATGTGGCCGGTTGGCTCCGCGCCTTTCGTAAAGCCACCGGTTGGCTGCCGCGGGGGCGGCACCGCAGCCGCCGCA TGGCCACCAAGGTGTTTTGCTCCACCTTGAAGCAACGCCATTCGCTAAAACCAGCCCGTAGATCACAGCCGCCGCAGGCC GCAGCCGCCAGGCGCTGA
Upstream 100 bases:
>100_bases AGCACCGCAACGGCCCAGTTGGCACCGTGAAGTTGCTATTTGAAGCGCAGTTCACCCGCTTCCGCAACCTGGCGGCACCT GGGGGCTAACCAAACGACTC
Downstream 100 bases:
>100_bases AACCAAATACGCCGGTTCCGATAATGAAGCGATGGAGCCAGCTGCGCTGCCCACCGAATCCTTTGAGCTGATCGTTGTCG GCGGTGGTCATGCCGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MWIGRILLLGYLSSVVARWTMSPAAHRRYVAGWLRAFRKATGWLPRGRHRSRRMATKVFCSTLKQRHSLKPARRSQPPQA AAARR
Sequences:
>Translated_85_residues MWIGRILLLGYLSSVVARWTMSPAAHRRYVAGWLRAFRKATGWLPRGRHRSRRMATKVFCSTLKQRHSLKPARRSQPPQA AAARR >Mature_85_residues MWIGRILLLGYLSSVVARWTMSPAAHRRYVAGWLRAFRKATGWLPRGRHRSRRMATKVFCSTLKQRHSLKPARRSQPPQA AAARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9854; Mature: 9854
Theoretical pI: Translated: 12.98; Mature: 12.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIGRILLLGYLSSVVARWTMSPAAHRRYVAGWLRAFRKATGWLPRGRHRSRRMATKVFC CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH STLKQRHSLKPARRSQPPQAAAARR HHHHHHHCCCCHHCCCCCCCCCCCC >Mature Secondary Structure MWIGRILLLGYLSSVVARWTMSPAAHRRYVAGWLRAFRKATGWLPRGRHRSRRMATKVFC CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH STLKQRHSLKPARRSQPPQAAAARR HHHHHHHCCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA